Primers

A primer is a curated cohort of spatial datasets from at least three papers, embedded per technology family and, where the gates pass, jointly. Each one describes its cohort; none is a benchmark. 10 primers.

Visium · Visium HD · Xenium 59 datasets
Human colon and colorectal cancer
10 papers · 1,871,007 observations
VisiumVisium HDXenium Release 2026-11-01
Visium · Visium HD · Xenium 141 datasets
Human kidney in health and disease
23 papers · 1,172,134 observations
VisiumVisium HDXenium Release 2026-11-01
MERSCOPE · Visium · Visium HD · Xenium 128 datasets
Human liver
22 papers · 4,288,661 observations
MERSCOPEVisiumVisium HDXenium Release 2026-11-01
MERSCOPE · Visium · Visium HD · Xenium 229 datasets
Human lung in health, fibrosis and cancer
56 papers · 9,770,408 observations
MERSCOPEVisiumVisium HDXenium Release 2026-11-01
Visium · Visium HD · Xenium 100 datasets
Human ovarian cancer
16 papers · 2,018,057 observations
VisiumVisium HDXenium Release 2026-11-01
Visium · Xenium 178 datasets
Human pancreatic cancer
14 papers · 1,745,845 observations
VisiumXenium Release 2026-11-01
MERSCOPE · Spatial Transcriptomics · Visium · Visium HD · Xenium 324 datasets
Human skin
27 papers · 2,204,567 observations
MERSCOPESpatial TranscriptomicsVisiumVisium HDXenium Release 2026-11-01
Visium · Visium HD · Xenium 59 datasets
Mouse kidney
11 papers · 1,853,730 observations
VisiumVisium HDXenium Release 2026-11-01
MERSCOPE · Visium · Xenium 169 datasets
Mouse liver
23 papers · 4,413,264 observations
MERSCOPEVisiumXenium Release 2026-11-01
MERFISH · MERSCOPE · Xenium 336 datasets
Normal adult mouse brain on imaging platforms
24 papers · 15,425,572 observations
MERFISHMERSCOPEXenium Release 2026-11-01