Visium
Mouse placenta
GSM9762124
bronze Interactive viewer H&E Provisional
print(sdata)
SpatialData object
├── Images
│ ├── 'GSM9762124_DBP-M2_hires_image': DataArray[cyx] (3, 1990, 2000)
│ └── 'GSM9762124_DBP-M2_lowres_image': DataArray[cyx] (3, 597, 600)
├── Shapes
│ └── 'GSM9762124_DBP-M2': GeoDataFrame shape: (1587, 2) (2D shapes)
└── Tables
└── 'table': AnnData (1587, 32285)
with coordinate systems:
▸ 'GSM9762124_DBP-M2', with elements:
GSM9762124_DBP-M2_hires_image (Images), GSM9762124_DBP-M2_lowres_image (Images), GSM9762124_DBP-M2 (Shapes)
▸ 'GSM9762124_DBP-M2_downscaled_hires', with elements:
GSM9762124_DBP-M2_hires_image (Images), GSM9762124_DBP-M2 (Shapes)
▸ 'GSM9762124_DBP-M2_downscaled_lowres', with elements:
GSM9762124_DBP-M2_lowres_image (Images), GSM9762124_DBP-M2 (Shapes) Python · sddb client
from sddb import Catalog
ds = Catalog().dataset("SPWE4dQf80x4bi350000")
ds.elements() # inspect without downloading
sdata = ds.to_sdata() # cached locally, reused
print(sdata) Python · lamindb
Needs pip install lamindb and network access to the Lamin database, which is limited during the alpha. If it fails, use the Client tab.
import lamindb as ln
db = ln.DB("scverse/spatialdata-db")
artifact = db.Artifact.get("SPWE4dQf80x4bi35") # stem uid: Lamin resolves it to the latest version
sdata = artifact.load() # cache, then load into memory
group = artifact.open() # stream without downloading
path = artifact.cache() # sync into the local cache, returns the path Shell
# sddb client: download the .zarr into data/
sddb-cli download SPWE4dQf80x4bi350000 --dest data/
# or lamin: cache the dataset and print its local path
lamin load https://lamin.ai/scverse/spatialdata-db/artifact/SPWE4dQf80x4bi35
# or connect once, then load by uid
lamin connect scverse/spatialdata-db
lamin load artifact --uid SPWE4dQf80x4bi35License: NCBI GEO policy
Part of collection
Prenatal DBP Exposure Dysregulate Fetal-Placenta Spatial Transcriptomic Profiles→ 12 datasets · comparison
Metadata
- Technology
- Visium
- Organism
- mouse
- Tissue
- placenta
- Modality
- RNA
- Observations (spots)
- 1,587
- Tier
- bronze
- Chemistry
- Visium v1
- Resolution
- 2,000 × 1,990 px
- mpp
- 3.320 µm/px
- Size
- 40.5 MB
- Sample ID
- GSM9762124
- License
- NCBI GEO policy
- Published
- Jul 11, 2026
Cite this dataset
doi.org/10.64898/2026.07.11.732137 ↗ BibTeX
@article{Yang_2026,
title = {Prenatal Dibutyl Phthalate Exposure Dysregulates Fetal-Placental Vascular Function and Placental Vasculature-Specific Lipid Metabolism},
url = {http://dx.doi.org/10.64898/2026.07.11.732137},
DOI = {10.64898/2026.07.11.732137},
publisher = {openRxiv},
author = {Yang, Xinran and Kadlec, Dilen and Schultz, Jordan and Craig, Zelieann R. and Zhou, Chi},
year = {2026},
month = July
}Source: NCBI GEO ↗ · License: NCBI GEO policy ↗ · Reprocessed to SpatialData by SpatialData-DB