# SpatialData-DB datasets, shard f9

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-saphenous-vein-kixx3uyanvafxbn60000"></a>
## Human saphenous vein

- uid: `KIxx3UYAnVAfXBn60000`
- Page: /datasets/visium-spatial-gene-expression-saphenous-vein-kixx3uyanvafxbn60000/
- Technology: Visium
- Organism: human
- Tissue: saphenous vein
- Modality: RNA
- Observations (spots): 4,941
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310351
- Publication: https://doi.org/10.1152/ajpheart.00653.2025
- Collections: [geo-gse310351](/collections/md/a.md#geo-gse310351)
- Load: `Catalog().dataset("KIxx3UYAnVAfXBn60000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-dhkoccv7pitfvmyn0000"></a>
## Mouse colon

- uid: `dhkoCcV7PITfVmyN0000`
- Page: /datasets/visium-spatial-gene-expression-colon-dhkoccv7pitfvmyn0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 3,208
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334067
- Publication: https://doi.org/10.1038/s41588-026-02673-0
- Collections: [geo-gse334067](/collections/md/b.md#geo-gse334067)
- Load: `Catalog().dataset("dhkoCcV7PITfVmyN0000").to_sdata()`


<a id="spatial-transcriptomics-breast-noofbst2yd2dlaum0000"></a>
## Human breast

- uid: `nooFBsT2YD2DlAuM0000`
- Page: /datasets/spatial-transcriptomics-breast-noofbst2yd2dlaum0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 435
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("nooFBsT2YD2DlAuM0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-3j8q12hojxd5gghj0000"></a>
## Mouse spinal cord

- uid: `3j8Q12HOJxd5ggHj0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-3j8q12hojxd5gghj0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 121
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("3j8Q12HOJxd5ggHj0000").to_sdata()`


<a id="spatial-transcriptomics-breast-puljc0eusbbtcezf0000"></a>
## Human breast

- uid: `PuLjC0EUsbbtcezF0000`
- Page: /datasets/spatial-transcriptomics-breast-puljc0eusbbtcezf0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 334
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("PuLjC0EUsbbtcezF0000").to_sdata()`


<a id="spatial-transcriptomics-breast-rosdvqvrdawwpahm0000"></a>
## Human breast

- uid: `RoSdvqVrDawwPahm0000`
- Page: /datasets/spatial-transcriptomics-breast-rosdvqvrdawwpahm0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 289
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/34650042/
- Publication: https://doi.org/10.1038/s41467-021-26271-2
- Collections: [doi-10-1038-s41467-021-26271-2](/collections/md/6.md#doi-10-1038-s41467-021-26271-2)
- Load: `Catalog().dataset("RoSdvqVrDawwPahm0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-pmqmyqaouckaofnm0000"></a>
## Human intestine

- uid: `PMqMYQaOuCkaofNm0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-pmqmyqaouckaofnm0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: colon adenocarcinoma
- Modality: RNA
- Observations (spots): 1,803
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.biorxiv.org/content/10.1101/2023.01.23.525135v2
- Publication: https://doi.org/10.1101/2023.01.23.525135
- Collections: [doi-10-1101-2023-01-23-525135](/collections/md/f.md#doi-10-1101-2023-01-23-525135)
- Load: `Catalog().dataset("PMqMYQaOuCkaofNm0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-ko0mnuvy27gf4rni0000"></a>
## Human prostate gland

- uid: `KO0mnuVY27gF4rNI0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-ko0mnuvy27gf4rni0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 1,525
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("KO0mnuVY27gF4rNI0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-fbxv2c1ghrecxwkt0000"></a>
## Mouse spinal cord

- uid: `FBXV2c1GhrecXWkT0000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-fbxv2c1ghrecxwkt0000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Modality: RNA
- Observations (spots): 561
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05385-7
- Publication: https://doi.org/10.1038/s41586-022-05385-7
- Collections: [doi-10-1038-s41586-022-05385-7](/collections/md/a.md#doi-10-1038-s41586-022-05385-7)
- Load: `Catalog().dataset("FBXV2c1GhrecXWkT0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-i36tk06zjpypmpb20000"></a>
## Human heart

- uid: `I36TK06ZJpyPmpb20000`
- Page: /datasets/visium-spatial-gene-expression-heart-i36tk06zjpypmpb20000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 1,564
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("I36TK06ZJpyPmpb20000").to_sdata()`


<a id="mibi-tof-lymph-node-ywgvodvdenckuttc0000"></a>
## Human lymph node

- uid: `yWGVodVDeNckUTTc0000`
- Page: /datasets/mibi-tof-lymph-node-ywgvodvdenckuttc0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,315
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("yWGVodVDeNckUTTc0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-geyvrphznhaumq1m0000"></a>
## Human colon

- uid: `GEyvRPhzNhAuMQ1m0000`
- Page: /datasets/visium-spatial-gene-expression-colon-geyvrphznhaumq1m0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Condition: colorectal carcinoma
- Modality: RNA
- Observations (spots): 4,682
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334323
- Collections: [geo-gse334323](/collections/md/a.md#geo-gse334323)
- Load: `Catalog().dataset("GEyvRPhzNhAuMQ1m0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-y6tcgpcucqi4icqn0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `Y6TCGpcUcQI4IcQn0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-y6tcgpcucqi4icqn0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 157,073
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE317379
- Load: `Catalog().dataset("Y6TCGpcUcQI4IcQn0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-czusxcqcood0xzxm0000"></a>
## Human skin of body

- uid: `cZUSXcqCood0xzxm0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-czusxcqcood0xzxm0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 873
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8804030
- Collections: [geo-gse290027](/collections/md/d.md#geo-gse290027)
- Load: `Catalog().dataset("cZUSXcqCood0xzxm0000").to_sdata()`


<a id="10x-xenium-bone-marrow-72ugwr35uq44nqog0000"></a>
## Human bone marrow

- uid: `72ugwr35Uq44nQOg0000`
- Page: /datasets/10x-xenium-bone-marrow-72ugwr35uq44nqog0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (cells): 41,258
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288340
- Load: `Catalog().dataset("72ugwr35Uq44nQOg0000").to_sdata()`


<a id="10x-xenium-larynx-tnhj0psb4pgkf0ja0000"></a>
## Human larynx

- uid: `tnHj0pSb4Pgkf0Ja0000`
- Page: /datasets/10x-xenium-larynx-tnhj0psb4pgkf0ja0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: larynx
- Condition: laryngeal squamous cell carcinoma
- Modality: RNA
- Observations (cells): 77,787
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE343350
- Load: `Catalog().dataset("tnHj0pSb4Pgkf0Ja0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-pcx4x6clum5otwqw0000"></a>
## Mouse skin of body

- uid: `pCX4x6cLUM5oTWqw0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-pcx4x6clum5otwqw0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6319698
- Collections: [geo-gse207592](/collections/md/4.md#geo-gse207592)
- Load: `Catalog().dataset("pCX4x6cLUM5oTWqw0000").to_sdata()`


<a id="mibi-tof-breast-bfsiiucjb7b769fm0000"></a>
## Human breast

- uid: `BFsIiUCJB7b769fm0000`
- Page: /datasets/mibi-tof-breast-bfsiiucjb7b769fm0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,533
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("BFsIiUCJB7b769fm0000").to_sdata()`


<a id="10x-xenium-skin-of-body-qgyvqtywhdwvfjzh0000"></a>
## Mouse skin of body

- uid: `QGyvqTYWhdwvfJZh0000`
- Page: /datasets/10x-xenium-skin-of-body-qgyvqtywhdwvfjzh0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: skin of body
- Condition: basal cell carcinoma
- Modality: RNA
- Observations (cells): 103,216
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320484
- Load: `Catalog().dataset("QGyvqTYWhdwvfJZh0000").to_sdata()`


<a id="visium-spatial-gene-expression-ectocervix-gtfyvsghv5gn4cb30000"></a>
## Human ectocervix

- uid: `gtfyVSghV5Gn4cb30000`
- Page: /datasets/visium-spatial-gene-expression-ectocervix-gtfyvsghv5gn4cb30000/
- Technology: Visium
- Organism: human
- Tissue: ectocervix
- Condition: HIV infectious disease
- Modality: RNA
- Observations (spots): 978
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8811061
- Collections: [geo-gse290350](/collections/md/0.md#geo-gse290350)
- Load: `Catalog().dataset("gtfyVSghV5Gn4cb30000").to_sdata()`


<a id="merfish-brain-paynlvqb2thmxd9n0000"></a>
## Mouse brain

- uid: `pAynlVqB2ThmXD9N0000`
- Page: /datasets/merfish-brain-paynlvqb2thmxd9n0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 22,270
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("pAynlVqB2ThmXD9N0000").to_sdata()`


<a id="mibi-tof-breast-focr6b8drhgm1kqe0000"></a>
## Human breast

- uid: `focR6B8drhGm1Kqe0000`
- Page: /datasets/mibi-tof-breast-focr6b8drhgm1kqe0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,942
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("focR6B8drhGm1Kqe0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-yywsz9yexcxuvjue0000"></a>
## Human lymph node

- uid: `yywsz9YexCXUvJUe0000`
- Page: /datasets/phenocycler-fusion-lymph-node-yywsz9yexcxuvjue0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 11,641
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("yywsz9YexCXUvJUe0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-tumfrdryiwdcvk780000"></a>
## Human lymph node

- uid: `TUmfrdRYIwDCVK780000`
- Page: /datasets/phenocycler-fusion-lymph-node-tumfrdryiwdcvk780000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 11,508
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("TUmfrdRYIwDCVK780000").to_sdata()`


<a id="mibi-tof-breast-kjyuvzn1metdj9o00000"></a>
## Human breast

- uid: `kJyuvZN1METDj9O00000`
- Page: /datasets/mibi-tof-breast-kjyuvzn1metdj9o00000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,165
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("kJyuvZN1METDj9O00000").to_sdata()`


<a id="vizgen-merscope-brain-tcay6f4jjsubi7ui0000"></a>
## Mouse brain

- uid: `TcAY6f4jjSUbI7ui0000`
- Page: /datasets/vizgen-merscope-brain-tcay6f4jjsubi7ui0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 10,648
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("TcAY6f4jjSUbI7ui0000").to_sdata()`


<a id="mibi-tof-unknown-d9lglko6ghfsy0kt0000"></a>
## Human unknown

- uid: `D9lGlKO6ghfsy0Kt0000`
- Page: /datasets/mibi-tof-unknown-d9lglko6ghfsy0kt0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: unknown
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,526
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("D9lGlKO6ghfsy0Kt0000").to_sdata()`


<a id="vizgen-merscope-cranial-nerve-ii-lyw5mlaozb9dkogg0000"></a>
## Mouse cranial nerve II

- uid: `LyW5mLaozB9dKOGG0000`
- Page: /datasets/vizgen-merscope-cranial-nerve-ii-lyw5mlaozb9dkogg0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: cranial nerve II
- Modality: RNA
- Observations (cells): 11,148
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE275954
- Publication: https://doi.org/10.1038/s41593-025-01955-w
- Load: `Catalog().dataset("LyW5mLaozB9dKOGG0000").to_sdata()`