# SpatialData-DB datasets, shard f8

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="spatial-transcriptomics-spinal-cord-lhuindtdpyzaoqzj0000"></a>
## Mouse spinal cord

- uid: `lHUInDTdPyZaoQzJ0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-lhuindtdpyzaoqzj0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 160
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("lHUInDTdPyZaoQzJ0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-0lxsvanxpa7hsbv60000"></a>
## Mouse spinal cord

- uid: `0lxsVANXPA7hsBv60000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-0lxsvanxpa7hsbv60000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 393
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("0lxsVANXPA7hsBv60000").to_sdata()`


<a id="spatial-transcriptomics-breast-x9fouaexgyeiveug0000"></a>
## Human breast

- uid: `X9FoUaeXgyeIveuG0000`
- Page: /datasets/spatial-transcriptomics-breast-x9fouaexgyeiveug0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 432
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("X9FoUaeXgyeIveuG0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-cyzfjcqypvzwi55i0000"></a>
## Human skin of body

- uid: `CyzFJCqYpvZWI55i0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-cyzfjcqypvzwi55i0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: psoriasis
- Modality: RNA
- Observations (spots): 1,144
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("CyzFJCqYpvZWI55i0000").to_sdata()`


<a id="visium-hd-intestine-jfs0efhnhs5lebu70000"></a>
## Human intestine

- uid: `jFs0EFHnhS5lebU70000`
- Page: /datasets/visium-hd-intestine-jfs0efhnhs5lebu70000/
- Technology: Visium HD
- Organism: human
- Tissue: intestine
- Condition: graft versus host disease
- Modality: RNA
- Observations (bins): 221,682
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9219227
- Publication: https://doi.org/10.1038/s41590-026-02631-2
- Collections: [geo-gse307215-gvhd-gut](/collections/md/2.md#geo-gse307215-gvhd-gut)
- Load: `Catalog().dataset("jFs0EFHnhS5lebU70000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-om8v2fbi4jcgbtwb0000"></a>
## Human breast

- uid: `Om8V2Fbi4JCgbTwB0000`
- Page: /datasets/visium-spatial-gene-expression-breast-om8v2fbi4jcgbtwb0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 3,116
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE210616
- Publication: https://doi.org/10.1158/0008-5472.CAN-22-2682
- Collections: [geo-gse210616](/collections/md/8.md#geo-gse210616)
- Load: `Catalog().dataset("Om8V2Fbi4JCgbTwB0000").to_sdata()`


<a id="visium-spatial-gene-expression-tendon-gyhey2zcnq7hher30000"></a>
## Mouse tendon

- uid: `GYHEY2zcnq7hhEr30000`
- Page: /datasets/visium-spatial-gene-expression-tendon-gyhey2zcnq7hher30000/
- Technology: Visium
- Organism: mouse
- Tissue: tendon
- Modality: RNA
- Observations (spots): 1,706
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216214
- Publication: https://doi.org/10.1016/j.celrep.2022.111706
- Collections: [geo-gse216214](/collections/md/c.md#geo-gse216214)
- Load: `Catalog().dataset("GYHEY2zcnq7hhEr30000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-7odg3anf5w2jqijv0000"></a>
## Human kidney

- uid: `7oDg3aNF5w2JqiJV0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-7odg3anf5w2jqijv0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 944
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("7oDg3aNF5w2JqiJV0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-hhydiryrs4etfcqp0000"></a>
## Human prostate gland

- uid: `HHYDirYRS4EtfcQp0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-hhydiryrs4etfcqp0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 1,395
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("HHYDirYRS4EtfcQp0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-oldpgxmkwbfi9ro10000"></a>
## Mouse brain

- uid: `oLdpgXMKwBfI9rO10000`
- Page: /datasets/visium-spatial-gene-expression-brain-oldpgxmkwbfi9ro10000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 3,697
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282203
- Publication: https://doi.org/10.64898/2026.01.26.701799
- Collections: [geo-gse282203](/collections/md/3.md#geo-gse282203)
- Load: `Catalog().dataset("oLdpgXMKwBfI9rO10000").to_sdata()`


<a id="spatial-cut-tag-brain-bquu5qyosipx0yeg0000"></a>
## Mouse brain

- uid: `bQuu5QyOsIpx0YEG0000`
- Page: /datasets/spatial-cut-tag-brain-bquu5qyosipx0yeg0000/
- Technology: spatial CUT&Tag
- Organism: mouse
- Tissue: brain
- Modality: Epigenomics
- Observations: 9,752
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE218593
- Publication: https://doi.org/10.1038/s41586-023-05795-1
- Collections: [geo-gse218593](/collections/md/a.md#geo-gse218593)
- Load: `Catalog().dataset("bQuu5QyOsIpx0YEG0000").to_sdata()`


<a id="visium-spatial-gene-expression-locus-ceruleus-agaxgimbmtzasc8r0000"></a>
## Human locus ceruleus

- uid: `aGAXGIMbMtZAsC8R0000`
- Page: /datasets/visium-spatial-gene-expression-locus-ceruleus-agaxgimbmtzasc8r0000/
- Technology: Visium
- Organism: human
- Tissue: locus ceruleus
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307866
- Publication: https://doi.org/10.1101/2025.10.29.685354
- Collections: [geo-gse307866](/collections/md/9.md#geo-gse307866)
- Load: `Catalog().dataset("aGAXGIMbMtZAsC8R0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-rpjwqkvw45ocx92t0000"></a>
## Mouse brain

- uid: `Rpjwqkvw45ocx92t0000`
- Page: /datasets/visium-spatial-gene-expression-brain-rpjwqkvw45ocx92t0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,625
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("Rpjwqkvw45ocx92t0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-ryujy4z4n4yjdo9s0000"></a>
## Human pancreas

- uid: `ryujy4z4n4yJdo9s0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-ryujy4z4n4yjdo9s0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,343
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("ryujy4z4n4yJdo9s0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-udg3mrimfxucmgz60000"></a>
## Mouse lung

- uid: `udG3MRImfXuCmgz60000`
- Page: /datasets/visium-spatial-gene-expression-lung-udg3mrimfxucmgz60000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: pulmonary fibrosis
- Modality: RNA
- Observations (spots): 1,134
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7454047
- Collections: [geo-gse234198](/collections/md/6.md#geo-gse234198)
- Load: `Catalog().dataset("udG3MRImfXuCmgz60000").to_sdata()`


<a id="10x-xenium-coronary-artery-rcqbjvw2toritjmj0000"></a>
## Human coronary artery

- uid: `RCqBjvW2torItJmj0000`
- Page: /datasets/10x-xenium-coronary-artery-rcqbjvw2toritjmj0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: coronary artery
- Condition: atherosclerosis
- Modality: RNA
- Observations (cells): 7,194
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314854
- Publication: https://doi.org/10.1126/science.adx1736
- Load: `Catalog().dataset("RCqBjvW2torItJmj0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-vj22wede0cnriz0j0000"></a>
## Mouse liver

- uid: `VJ22wEDE0cNRIZ0j0000`
- Page: /datasets/visium-spatial-gene-expression-liver-vj22wede0cnriz0j0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: fatty liver disease
- Modality: RNA
- Observations (spots): 1,248
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5764424
- Collections: [geo-gse192741](/collections/md/4.md#geo-gse192741)
- Load: `Catalog().dataset("VJ22wEDE0cNRIZ0j0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-bfwjvjx7fahqdkax0000"></a>
## Mouse spinal cord

- uid: `BFwJvjx7FAHqDKAx0000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-bfwjvjx7fahqdkax0000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Modality: RNA
- Observations (spots): 3,291
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268779
- Collections: [geo-gse268779](/collections/md/6.md#geo-gse268779)
- Load: `Catalog().dataset("BFwJvjx7FAHqDKAx0000").to_sdata()`


<a id="merfish-brain-a0bfejycbxesr1ot0000"></a>
## Mouse brain

- uid: `a0bFEJyCBxeSr1OT0000`
- Page: /datasets/merfish-brain-a0bfejycbxesr1ot0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 15,892
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("a0bFEJyCBxeSr1OT0000").to_sdata()`


<a id="vizgen-merscope-brain-ho74cqmbomyuhtl70000"></a>
## Mouse brain

- uid: `hO74CQmBOmyUhtL70000`
- Page: /datasets/vizgen-merscope-brain-ho74cqmbomyuhtl70000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 13,610
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("hO74CQmBOmyUhtL70000").to_sdata()`


<a id="mibi-tof-breast-7znnheqhkru4aa3p0000"></a>
## Human breast

- uid: `7ZnnheqhKru4Aa3P0000`
- Page: /datasets/mibi-tof-breast-7znnheqhkru4aa3p0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,941
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("7ZnnheqhKru4Aa3P0000").to_sdata()`


<a id="vizgen-merscope-white-matter-v6hu0vaxgjbx1rel0000"></a>
## Human white matter

- uid: `V6hU0vAXGJBX1REL0000`
- Page: /datasets/vizgen-merscope-white-matter-v6hu0vaxgjbx1rel0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (cells): 34,952
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284005
- Publication: https://doi.org/10.1016/j.immuni.2025.10.003
- Collections: [geo-gse284005](/collections/md/2.md#geo-gse284005)
- Load: `Catalog().dataset("V6hU0vAXGJBX1REL0000").to_sdata()`


<a id="vizgen-merscope-white-matter-f3lnyrpbrwwsdfnu0000"></a>
## Human white matter

- uid: `F3lnYRpBrwwSdFNu0000`
- Page: /datasets/vizgen-merscope-white-matter-f3lnyrpbrwwsdfnu0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (cells): 31,404
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284005
- Publication: https://doi.org/10.1016/j.immuni.2025.10.003
- Collections: [geo-gse284005](/collections/md/2.md#geo-gse284005)
- Load: `Catalog().dataset("F3lnYRpBrwwSdFNu0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-mq2bzitu0eqc61zk0000"></a>
## Macaque basal ganglion

- uid: `Mq2bZItu0EQC61zk0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-mq2bzitu0eqc61zk0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 64,686
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("Mq2bZItu0EQC61zk0000").to_sdata()`


<a id="mibi-tof-skin-of-body-kjt9mtk01gef4ho10000"></a>
## Human skin of body

- uid: `Kjt9mtK01Gef4hO10000`
- Page: /datasets/mibi-tof-skin-of-body-kjt9mtk01gef4ho10000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: skin of body
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,543
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("Kjt9mtK01Gef4hO10000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-ar0v8bz8hyncbn730000"></a>
## Human kidney

- uid: `ar0V8bz8HYNcBN730000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-ar0v8bz8hyncbn730000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 6,500
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-04-10_20h22m27s
- Load: `Catalog().dataset("ar0V8bz8HYNcBN730000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-rmo1kysmx9lbcf2v0000"></a>
## Macaque basal ganglion

- uid: `rMo1KysMx9LBcF2V0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-rmo1kysmx9lbcf2v0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 4,211
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("rMo1KysMx9LBcF2V0000").to_sdata()`