# SpatialData-DB datasets, shard f6

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-heart-vqobjazzycs7pwqa0000"></a>
## Human heart

- uid: `vqObjAZzyCs7pwQA0000`
- Page: /datasets/visium-hd-heart-vqobjazzycs7pwqa0000/
- Technology: Visium HD
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (bins): 666,027
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-6p5mm-human-heart
- Load: `Catalog().dataset("vqObjAZzyCs7pwQA0000").to_sdata()`


<a id="spatial-transcriptomics-brain-runvrplcd6jvewpf0000"></a>
## Mouse brain

- uid: `rUNvrplCd6JveWpf0000`
- Page: /datasets/spatial-transcriptomics-brain-runvrplcd6jvewpf0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 276
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("rUNvrplCd6JveWpf0000").to_sdata()`


<a id="mibi-tof-breast-scsacsgy6lzjukgp0000"></a>
## Human breast

- uid: `SCSacsGy6LzJUkgP0000`
- Page: /datasets/mibi-tof-breast-scsacsgy6lzjukgp0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,988
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("SCSacsGy6LzJUkgP0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-qhy8lmqhlbe55c990000"></a>
## Human prostate gland

- uid: `QHy8lmQhlBe55c990000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-qhy8lmqhlbe55c990000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate adenocarcinoma
- Modality: RNA
- Observations (spots): 3,998
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: None (internal)
- Collections: [hest-prostate-st-internal](/collections/md/b.md#hest-prostate-st-internal)
- Load: `Catalog().dataset("QHy8lmQhlBe55c990000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-ie0jblepjkoahhjg0000"></a>
## Human kidney

- uid: `iE0JblepJkoAHHJG0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-ie0jblepjkoahhjg0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: clear cell renal carcinoma
- Modality: RNA
- Observations (spots): 4,755
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/35231421/
- Publication: https://doi.org/10.1016/j.immuni.2022.02.001
- Collections: [doi-10-1016-j-immuni-2022-02-001](/collections/md/d.md#doi-10-1016-j-immuni-2022-02-001)
- Load: `Catalog().dataset("iE0JblepJkoAHHJG0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-8jm9mtbyx9pzwur90000"></a>
## Human liver

- uid: `8jM9mtBYX9PZWuR90000`
- Page: /datasets/visium-spatial-gene-expression-liver-8jm9mtbyx9pzwur90000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: primary sclerosing cholangitis
- Modality: RNA
- Observations (spots): 4,992
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/38199298/
- Publication: https://doi.org/10.1016/j.jhep.2023.12.023
- Load: `Catalog().dataset("8jM9mtBYX9PZWuR90000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-rx1s0dufh65wtel10000"></a>
## Human ovary

- uid: `RX1s0DuFH65wTEL10000`
- Page: /datasets/visium-spatial-gene-expression-ovary-rx1s0dufh65wtel10000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: classic galactosemia
- Modality: RNA
- Observations (spots): 1,225
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268523
- Publication: https://doi.org/10.1002/ctm2.70043
- Collections: [geo-gse268523](/collections/md/8.md#geo-gse268523)
- Load: `Catalog().dataset("RX1s0DuFH65wTEL10000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-wxx5buc2u5srxten0000"></a>
## Mouse brain

- uid: `WxX5buc2U5srXTEN0000`
- Page: /datasets/visium-spatial-gene-expression-brain-wxx5buc2u5srxten0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 1,266
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE240715
- Publication: https://doi.org/10.1242/bio.060151
- Collections: [geo-gse240715](/collections/md/4.md#geo-gse240715)
- Load: `Catalog().dataset("WxX5buc2U5srXTEN0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-pgr0oeeeuv1fmift0000"></a>
## Human pancreas

- uid: `PGr0OeeEUv1FMIFT0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-pgr0oeeeuv1fmift0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Modality: RNA
- Observations (spots): 6,421
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296626
- Publication: https://doi.org/10.1101/2025.05.19.654940
- Collections: [geo-gse296626](/collections/md/0.md#geo-gse296626)
- Load: `Catalog().dataset("PGr0OeeEUv1FMIFT0000").to_sdata()`


<a id="visium-spatial-gene-expression-thyroid-gland-y1juqwdxawcwwwpo0000"></a>
## Human thyroid gland

- uid: `Y1juqwdxAwCWWWpo0000`
- Page: /datasets/visium-spatial-gene-expression-thyroid-gland-y1juqwdxawcwwwpo0000/
- Technology: Visium
- Organism: human
- Tissue: thyroid gland
- Condition: thyroid gland carcinoma
- Modality: RNA
- Observations (spots): 4,952
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250521
- Collections: [geo-gse250521](/collections/md/5.md#geo-gse250521)
- Load: `Catalog().dataset("Y1juqwdxAwCWWWpo0000").to_sdata()`


<a id="visium-spatial-gene-expression-hypothalamus-sclmbehmurpdjv6c0001"></a>
## Human hypothalamus

- uid: `SClMbEHMurpDjV6C0001`
- Page: /datasets/visium-spatial-gene-expression-hypothalamus-sclmbehmurpdjv6c0001/
- Technology: Visium
- Organism: human
- Tissue: hypothalamus
- Modality: RNA
- Observations (spots): 4,929
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280316
- Collections: [geo-gse280316](/collections/md/5.md#geo-gse280316)
- Load: `Catalog().dataset("SClMbEHMurpDjV6C0001").to_sdata()`


<a id="visium-spatial-gene-expression-brain-tbq7dhafwpe2etsz0000"></a>
## Mouse brain

- uid: `TBQ7DHAFWPe2eTsz0000`
- Page: /datasets/visium-spatial-gene-expression-brain-tbq7dhafwpe2etsz0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 3,894
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283959
- Publication: https://doi.org/10.1126/sciadv.adv5673
- Collections: [geo-gse283959](/collections/md/3.md#geo-gse283959)
- Load: `Catalog().dataset("TBQ7DHAFWPe2eTsz0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-wqn77zz1zaetf8ah0000"></a>
## Human liver

- uid: `wqn77zz1Zaetf8ah0000`
- Page: /datasets/visium-spatial-gene-expression-liver-wqn77zz1zaetf8ah0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 937
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281759
- Publication: https://doi.org/10.1016/j.jhepr.2026.101790
- Collections: [geo-gse281759](/collections/md/3.md#geo-gse281759)
- Load: `Catalog().dataset("wqn77zz1Zaetf8ah0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-vjmzsi2jdawkxq5q0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `vJmZSi2jdawkxq5Q0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-vjmzsi2jdawkxq5q0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("vJmZSi2jdawkxq5Q0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-vvvs0qc3hcch6qad0000"></a>
## Mouse kidney

- uid: `VVvS0QC3Hcch6qaD0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-vvvs0qc3hcch6qad0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Modality: RNA
- Observations (spots): 1,815
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7090416
- Load: `Catalog().dataset("VVvS0QC3Hcch6qaD0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-ykzeqm47ri8hhwng0000"></a>
## Mouse heart

- uid: `yKzEqm47ri8hHwnG0000`
- Page: /datasets/visium-spatial-gene-expression-heart-ykzeqm47ri8hhwng0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Modality: RNA
- Observations (spots): 1,009
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8806100
- Collections: [geo-gse290094](/collections/md/b.md#geo-gse290094)
- Load: `Catalog().dataset("yKzEqm47ri8hHwnG0000").to_sdata()`


<a id="10x-xenium-bone-tissue-ftcwfwqbdwnk5emp0001"></a>
## Mouse bone tissue

- uid: `ftcwfWqbDwNk5EMp0001`
- Page: /datasets/10x-xenium-bone-tissue-ftcwfwqbdwnk5emp0001/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: bone tissue
- Modality: RNA
- Observations (cells): 247,876
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/mouse-bone-data-with-custom-add-on-panel-1-standard
- Collections: [10x-mouse-bone-data-with-custom-add-on-panel-1-standard](/collections/md/a.md#10x-mouse-bone-data-with-custom-add-on-panel-1-standard)
- Load: `Catalog().dataset("ftcwfWqbDwNk5EMp0001").to_sdata()`


<a id="visium-spatial-gene-expression-liver-kkwnukiwz8gyjo6h0000"></a>
## Mouse liver

- uid: `kkwNUKiwz8gyjO6H0000`
- Page: /datasets/visium-spatial-gene-expression-liver-kkwnukiwz8gyjo6h0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 3,776
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("kkwNUKiwz8gyjO6H0000").to_sdata()`


<a id="10x-xenium-spinal-cord-z2tjpgcefmo7s6dj0000"></a>
## Mouse spinal cord

- uid: `z2tjpgCeFMO7s6DJ0000`
- Page: /datasets/10x-xenium-spinal-cord-z2tjpgcefmo7s6dj0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: spinal cord
- Modality: RNA
- Observations (cells): 19,509
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328700
- Publication: https://doi.org/10.1038/s41467-026-74144-3
- Load: `Catalog().dataset("z2tjpgCeFMO7s6DJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-ectocervix-gcwkhafoji80oaqb0000"></a>
## Human ectocervix

- uid: `GCWkhAfoJI80OaQb0000`
- Page: /datasets/visium-spatial-gene-expression-ectocervix-gcwkhafoji80oaqb0000/
- Technology: Visium
- Organism: human
- Tissue: ectocervix
- Modality: RNA
- Observations (spots): 2,966
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9053839
- Collections: [geo-gse300112](/collections/md/2.md#geo-gse300112)
- Load: `Catalog().dataset("GCWkhAfoJI80OaQb0000").to_sdata()`


<a id="visium-spatial-gene-expression-thyroid-gland-ckcmzlop8wyym9pw0000"></a>
## Human thyroid gland

- uid: `CkCmZloP8wYYM9pw0000`
- Page: /datasets/visium-spatial-gene-expression-thyroid-gland-ckcmzlop8wyym9pw0000/
- Technology: Visium
- Organism: human
- Tissue: thyroid gland
- Condition: Hashimoto thyroiditis
- Modality: RNA
- Observations (spots): 4,626
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7221918
- Collections: [geo-gse230424](/collections/md/1.md#geo-gse230424)
- Load: `Catalog().dataset("CkCmZloP8wYYM9pw0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-cjokeif97oet3vza0000"></a>
## Human ovary

- uid: `cJokeif97OeT3VZa0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-cjokeif97oet3vza0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 1,014
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327312
- Collections: [geo-gse327312](/collections/md/b.md#geo-gse327312)
- Load: `Catalog().dataset("cJokeif97OeT3VZa0000").to_sdata()`


<a id="10x-xenium-coronary-artery-yy6la6aq3ajim6rf0000"></a>
## Human coronary artery

- uid: `Yy6lA6aQ3ajiM6Rf0000`
- Page: /datasets/10x-xenium-coronary-artery-yy6la6aq3ajim6rf0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: coronary artery
- Condition: atherosclerosis
- Modality: RNA
- Observations (cells): 19,051
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314854
- Publication: https://doi.org/10.1126/science.adx1736
- Load: `Catalog().dataset("Yy6lA6aQ3ajiM6Rf0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-bvggskks70zqu8wj0000"></a>
## Human skin of body

- uid: `BVgGSKKs70ZQu8wj0000`
- Page: /datasets/vizgen-merscope-skin-of-body-bvggskks70zqu8wj0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 6,742
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("BVgGSKKs70ZQu8wj0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-r6vytby9yth4ibri0000"></a>
## Human kidney

- uid: `r6vYtBY9YtH4IbRI0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-r6vytby9yth4ibri0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 7,760
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2018-07-27_17h57m26s
- Load: `Catalog().dataset("r6vYtBY9YtH4IbRI0000").to_sdata()`


<a id="mibi-tof-breast-ujrz3ljkpspsy7310000"></a>
## Human breast

- uid: `ujRz3LJKpSPSY7310000`
- Page: /datasets/mibi-tof-breast-ujrz3ljkpspsy7310000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,651
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("ujRz3LJKpSPSY7310000").to_sdata()`


<a id="mibi-tof-breast-2c6lsu6rblstpso30000"></a>
## Human breast

- uid: `2C6lsU6RbLSTpSO30000`
- Page: /datasets/mibi-tof-breast-2c6lsu6rblstpso30000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,498
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("2C6lsU6RbLSTpSO30000").to_sdata()`


<a id="10x-xenium-lung-hzixyl0sanqhxoei0000"></a>
## Human lung

- uid: `hZiXyl0saNqhXoeI0000`
- Page: /datasets/10x-xenium-lung-hzixyl0sanqhxoei0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (cells): 50,157
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311609
- Publication: https://doi.org/10.1038/s41592-026-03089-8
- Load: `Catalog().dataset("hZiXyl0saNqhXoeI0000").to_sdata()`


<a id="10x-xenium-brain-n0iztesaiqdvdrwd0000"></a>
## Human brain

- uid: `N0iztESAIqDvdRWD0000`
- Page: /datasets/10x-xenium-brain-n0iztesaiqdvdrwd0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (cells): 17,561
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302502
- Publication: https://doi.org/10.1016/j.immuni.2025.09.018
- Load: `Catalog().dataset("N0iztESAIqDvdRWD0000").to_sdata()`


<a id="10x-xenium-lung-dekh4ockisbasdb30000"></a>
## Human lung

- uid: `DEkH4oCkISbaSDB30000`
- Page: /datasets/10x-xenium-lung-dekh4ockisbasdb30000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (cells): 36,973
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311609
- Publication: https://doi.org/10.1038/s41592-026-03089-8
- Load: `Catalog().dataset("DEkH4oCkISbaSDB30000").to_sdata()`


<a id="10x-xenium-rectum-byy48qimqz7zxzbn0000"></a>
## Human rectum

- uid: `BYy48qIMQZ7zxzbn0000`
- Page: /datasets/10x-xenium-rectum-byy48qimqz7zxzbn0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: rectum
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 48,266
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("BYy48qIMQZ7zxzbn0000").to_sdata()`


<a id="10x-xenium-brain-ushqg3utqbteluzj0000"></a>
## Human brain

- uid: `UshQG3utqBTElUZJ0000`
- Page: /datasets/10x-xenium-brain-ushqg3utqbteluzj0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (cells): 2,011
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302502
- Publication: https://doi.org/10.1016/j.immuni.2025.09.018
- Load: `Catalog().dataset("UshQG3utqBTElUZJ0000").to_sdata()`