# SpatialData-DB datasets, shard f2

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-breast-uambmybqdrtr5sz20000"></a>
## Human breast

- uid: `UAmBmYBQdrTR5Sz20000`
- Page: /datasets/visium-spatial-gene-expression-breast-uambmybqdrtr5sz20000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: Invasive Ductal Carcinoma
- Modality: RNA
- Observations (spots): 3,798
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-breast-cancer-block-a-section-1-1-standard-1-1-0
- Load: `Catalog().dataset("UAmBmYBQdrTR5Sz20000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-y3zla78hpby5zp4b0000"></a>
## Mouse spinal cord

- uid: `Y3zLA78hpby5zP4b0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-y3zla78hpby5zp4b0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 259
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("Y3zLA78hpby5zP4b0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-ndxruszhdizodz550000"></a>
## Human lung

- uid: `NdXRusZHDIzOdZ550000`
- Page: /datasets/visium-spatial-gene-expression-lung-ndxruszhdizodz550000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 3,236
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-023-36071-5
- Publication: https://doi.org/10.1038/s41467-023-36071-5
- Collections: [doi-10-1038-s41467-023-36071-5](/collections/md/9.md#doi-10-1038-s41467-023-36071-5)
- Load: `Catalog().dataset("NdXRusZHDIzOdZ550000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-ah2rrjmk5gaonxay0000"></a>
## Human skin of body

- uid: `AH2rrjMK5gAOnXay0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-ah2rrjmk5gaonxay0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: lichen planus
- Modality: RNA
- Observations (spots): 651
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("AH2rrjMK5gAOnXay0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-oidgbzw3yfyxkbf00000"></a>
## Human breast

- uid: `oIDgbZw3YfyxKBF00000`
- Page: /datasets/visium-spatial-gene-expression-breast-oidgbzw3yfyxkbf00000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (spots): 2,707
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE242311
- Publication: https://doi.org/10.3390/ijms252011109
- Collections: [geo-gse242311](/collections/md/f.md#geo-gse242311)
- Load: `Catalog().dataset("oIDgbZw3YfyxKBF00000").to_sdata()`


<a id="10x-xenium-brain-t8cvk08ubzrwt9vv0000"></a>
## Mouse brain

- uid: `T8CvK08uBZrwt9vv0000`
- Page: /datasets/10x-xenium-brain-t8cvk08ubzrwt9vv0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Condition: demyelinating disease of central nervous system
- Modality: RNA
- Observations (cells): 120,337
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8253807
- Publication: https://doi.org/10.1016/j.celrep.2024.115194
- Collections: [geo-gse266689](/collections/md/6.md#geo-gse266689)
- Load: `Catalog().dataset("T8CvK08uBZrwt9vv0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-q4wom49upiu3nq6o0000"></a>
## Mouse kidney

- uid: `Q4WOm49uPIu3NQ6O0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-q4wom49upiu3nq6o0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Condition: renal fibrosis
- Modality: RNA
- Observations (spots): 2,320
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273978
- Publication: https://doi.org/10.1124/jpet.124.002330
- Collections: [geo-gse273978](/collections/md/9.md#geo-gse273978)
- Load: `Catalog().dataset("Q4WOm49uPIu3NQ6O0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-mg8o3jx0ruxriyei0000"></a>
## Human kidney

- uid: `mg8o3jX0rUxRiyeI0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-mg8o3jx0ruxriyei0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: clear cell renal carcinoma
- Modality: RNA
- Observations (spots): 4,174
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE294006
- Publication: https://doi.org/10.1016/j.ccell.2026.05.007
- Collections: [geo-gse294006](/collections/md/4.md#geo-gse294006)
- Load: `Catalog().dataset("mg8o3jX0rUxRiyeI0000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-hsxzwaynwfm62cyf0000"></a>
## Mouse entorhinal cortex

- uid: `hSXzwAyNWFm62CYF0000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-hsxzwaynwfm62cyf0000/
- Technology: Visium
- Organism: mouse
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 3,064
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347650
- Collections: [geo-gse347650](/collections/md/7.md#geo-gse347650)
- Load: `Catalog().dataset("hSXzwAyNWFm62CYF0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-hlyd1b92aiqqhl9e0000"></a>
## Human pancreas

- uid: `Hlyd1B92AiqQhl9E0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-hlyd1b92aiqqhl9e0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,760
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("Hlyd1B92AiqQhl9E0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-dq56sv6eylpeawru0000"></a>
## Mouse brain

- uid: `DQ56sV6EyLPeaWRu0000`
- Page: /datasets/visium-spatial-gene-expression-brain-dq56sv6eylpeawru0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: herpes simplex type 1 infectious disease
- Modality: RNA
- Observations (spots): 13,743
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299610
- Collections: [geo-gse299610](/collections/md/4.md#geo-gse299610)
- Load: `Catalog().dataset("DQ56sV6EyLPeaWRu0000").to_sdata()`


<a id="10x-xenium-bone-marrow-4uvlw3uiat8sxt6u0000"></a>
## Human bone marrow

- uid: `4UVlw3UIat8SXT6U0000`
- Page: /datasets/10x-xenium-bone-marrow-4uvlw3uiat8sxt6u0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Modality: RNA
- Observations (cells): 51,464
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335963
- Load: `Catalog().dataset("4UVlw3UIat8SXT6U0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-ndxicghmgr02lpzk0000"></a>
## Mouse liver

- uid: `NDXIcGHmgr02lpZK0000`
- Page: /datasets/visium-spatial-gene-expression-liver-ndxicghmgr02lpzk0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: colorectal cancer
- Modality: RNA
- Observations (spots): 1,284
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6859067
- Collections: [geo-gse221359](/collections/md/e.md#geo-gse221359)
- Load: `Catalog().dataset("NDXIcGHmgr02lpZK0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-bb2rkid3emziw9o90000"></a>
## Mouse lung

- uid: `Bb2RKId3emziw9o90000`
- Page: /datasets/visium-spatial-gene-expression-lung-bb2rkid3emziw9o90000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: pulmonary fibrosis
- Modality: RNA
- Observations (spots): 2,383
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7454048
- Collections: [geo-gse234198](/collections/md/6.md#geo-gse234198)
- Load: `Catalog().dataset("Bb2RKId3emziw9o90000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-knvozo5yfjwdxdwj0000"></a>
## Human ovary

- uid: `knVOZO5yFJwDXDwJ0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-knvozo5yfjwdxdwj0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 1,801
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6506115
- Collections: [geo-gse211956](/collections/md/0.md#geo-gse211956)
- Load: `Catalog().dataset("knVOZO5yFJwDXDwJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-amw0iixswqyuzcpw0000"></a>
## Mouse kidney

- uid: `AMW0iIXSwqyUZcPw0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-amw0iixswqyuzcpw0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Condition: acute kidney failure
- Modality: RNA
- Observations (spots): 3,915
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8323125
- Collections: [geo-gse269622](/collections/md/f.md#geo-gse269622)
- Load: `Catalog().dataset("AMW0iIXSwqyUZcPw0000").to_sdata()`


<a id="merfish-brain-9m3csoivrnffasy00000"></a>
## Mouse brain

- uid: `9M3cSOIVRnFFaSy00000`
- Page: /datasets/merfish-brain-9m3csoivrnffasy00000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 27,887
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("9M3cSOIVRnFFaSy00000").to_sdata()`


<a id="vizgen-merscope-white-matter-w4joksv1nlf6y6ta0000"></a>
## Human white matter

- uid: `W4joKsV1nlF6y6tA0000`
- Page: /datasets/vizgen-merscope-white-matter-w4joksv1nlf6y6ta0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (cells): 25,892
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284005
- Publication: https://doi.org/10.1016/j.immuni.2025.10.003
- Collections: [geo-gse284005](/collections/md/2.md#geo-gse284005)
- Load: `Catalog().dataset("W4joKsV1nlF6y6tA0000").to_sdata()`


<a id="vizgen-merscope-unknown-ngo9baymrztxtduk0000"></a>
## Human unknown

- uid: `ngo9baYMrztxtduk0000`
- Page: /datasets/vizgen-merscope-unknown-ngo9baymrztxtduk0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: unknown
- Modality: RNA
- Observations (cells): 42,101
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE308147
- Publication: https://doi.org/10.1038/s41467-025-64990-y
- Collections: [geo-gsm9238734](/collections/md/8.md#geo-gsm9238734)
- Load: `Catalog().dataset("ngo9baYMrztxtduk0000").to_sdata()`


<a id="10x-xenium-pleura-8g5fh0eo1wkag0df0000"></a>
## Human pleura

- uid: `8G5fH0Eo1wKag0dF0000`
- Page: /datasets/10x-xenium-pleura-8g5fh0eo1wkag0df0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: pleura
- Condition: pleural mesothelioma
- Modality: RNA
- Observations (cells): 134,530
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE300007
- Publication: https://doi.org/10.1038/s41467-025-63414-1
- Load: `Catalog().dataset("8G5fH0Eo1wKag0dF0000").to_sdata()`


<a id="mibi-tof-breast-0ttwr36xxvc7visd0000"></a>
## Human breast

- uid: `0TtWR36XXvc7visd0000`
- Page: /datasets/mibi-tof-breast-0ttwr36xxvc7visd0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,895
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("0TtWR36XXvc7visd0000").to_sdata()`


<a id="mibi-tof-breast-jwavpbebiuq97tze0000"></a>
## Human breast

- uid: `JwaVpBEbIUQ97tZE0000`
- Page: /datasets/mibi-tof-breast-jwavpbebiuq97tze0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,131
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("JwaVpBEbIUQ97tZE0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-jki0hbx3ercudrxo0000"></a>
## Human skin of body

- uid: `JkI0HbX3ERCudrXO0000`
- Page: /datasets/vizgen-merscope-skin-of-body-jki0hbx3ercudrxo0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 17,408
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("JkI0HbX3ERCudrXO0000").to_sdata()`


<a id="mibi-tof-breast-gswj5wq3lwkozowg0000"></a>
## Human breast

- uid: `gsWj5Wq3lWKozOwg0000`
- Page: /datasets/mibi-tof-breast-gswj5wq3lwkozowg0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 7,578
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("gsWj5Wq3lWKozOwg0000").to_sdata()`


<a id="10x-xenium-pancreas-xktu5cn3sikndgmo0000"></a>
## Mouse pancreas

- uid: `xKtu5cN3sIKNdGmO0000`
- Page: /datasets/10x-xenium-pancreas-xktu5cn3sikndgmo0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (cells): 78,357
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315243
- Publication: https://doi.org/10.1016/j.cell.2026.03.032
- Load: `Catalog().dataset("xKtu5cN3sIKNdGmO0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-hbuwaw8zvw2m6dfv0000"></a>
## Human skin of body

- uid: `HbUWAw8Zvw2M6DfV0000`
- Page: /datasets/vizgen-merscope-skin-of-body-hbuwaw8zvw2m6dfv0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,606
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("HbUWAw8Zvw2M6DfV0000").to_sdata()`


<a id="mibi-tof-breast-ooq55j8ele7zla2n0000"></a>
## Human breast

- uid: `OoQ55j8elE7zlA2N0000`
- Page: /datasets/mibi-tof-breast-ooq55j8ele7zla2n0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,210
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("OoQ55j8elE7zlA2N0000").to_sdata()`


<a id="vizgen-merscope-brain-gq9wqer2huwx6ohr0000"></a>
## Mouse brain

- uid: `Gq9WqeR2HUwx6OHr0000`
- Page: /datasets/vizgen-merscope-brain-gq9wqer2huwx6ohr0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 10,067
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("Gq9WqeR2HUwx6OHr0000").to_sdata()`


<a id="10x-xenium-bone-marrow-qgavi9yu1ekkvpxz0000"></a>
## Human bone marrow

- uid: `QGAVI9YU1eKkvpXz0000`
- Page: /datasets/10x-xenium-bone-marrow-qgavi9yu1ekkvpxz0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (cells): 31,873
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299207
- Publication: https://doi.org/10.1182/blood.2025028896
- Load: `Catalog().dataset("QGAVI9YU1eKkvpXz0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-ir79wez64facncbg0000"></a>
## Human kidney

- uid: `IR79Wez64FacNcbG0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-ir79wez64facncbg0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 8,930
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-01-05_02h22m18s
- Load: `Catalog().dataset("IR79Wez64FacNcbG0000").to_sdata()`


<a id="10x-xenium-bone-marrow-s4vqphbvwvp4vehs0000"></a>
## Mouse bone marrow

- uid: `S4VqphBvwVp4vehs0000`
- Page: /datasets/10x-xenium-bone-marrow-s4vqphbvwvp4vehs0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: bone marrow
- Modality: RNA
- Observations (cells): 246,079
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299207
- Publication: https://doi.org/10.1182/blood.2025028896
- Load: `Catalog().dataset("S4VqphBvwVp4vehs0000").to_sdata()`