# SpatialData-DB datasets, shard ec

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-colon-2z4utqeiztryw0yy0000"></a>
## Human colon

- uid: `2Z4uTqeIZtrYw0YY0000`
- Page: /datasets/visium-spatial-gene-expression-colon-2z4utqeiztryw0yy0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Condition: colorectal carcinoma
- Modality: RNA
- Observations (spots): 3,742
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311294
- Collections: [geo-gse311294](/collections/md/b.md#geo-gse311294)
- Load: `Catalog().dataset("2Z4uTqeIZtrYw0YY0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-vq7ea8u6egce5yl80000"></a>
## Human colon

- uid: `vQ7Ea8u6egcE5Yl80000`
- Page: /datasets/visium-spatial-gene-expression-colon-vq7ea8u6egce5yl80000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 11,174
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312204
- Publication: https://doi.org/10.1038/s41467-026-71944-5
- Collections: [geo-gse312204](/collections/md/4.md#geo-gse312204)
- Load: `Catalog().dataset("vQ7Ea8u6egcE5Yl80000").to_sdata()`


<a id="spatial-transcriptomics-brain-y6anmkmyhwspyaww0000"></a>
## Mouse brain

- uid: `y6aNmKMyhwspYaWw0000`
- Page: /datasets/spatial-transcriptomics-brain-y6anmkmyhwspyaww0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 242
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/27365449/
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("y6aNmKMyhwspYaWw0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-ucwmqnytzhmxz1yr0000"></a>
## Mouse spinal cord

- uid: `UCwmqnytZhMxz1Yr0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-ucwmqnytzhmxz1yr0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 308
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("UCwmqnytZhMxz1Yr0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-xrzib5m4gkkp7o4a0000"></a>
## Mouse brain

- uid: `xRZiB5m4gkKp7o4A0000`
- Page: /datasets/visium-spatial-gene-expression-brain-xrzib5m4gkkp7o4a0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,554
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/36776149/
- Publication: https://doi.org/10.1016/j.xgen.2021.100065
- Collections: [doi-10-1016-j-xgen-2021-100065](/collections/md/0.md#doi-10-1016-j-xgen-2021-100065)
- Load: `Catalog().dataset("xRZiB5m4gkKp7o4A0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-4ubyxhhqpieujkrc0000"></a>
## Mouse brain

- uid: `4uByxHhqpieUJkrC0000`
- Page: /datasets/visium-spatial-gene-expression-brain-4ubyxhhqpieujkrc0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,784
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.sciencedirect.com/science/article/abs/pii/S0889159123004166#:~:text=These%20data%20suggest%20binge%20drinking,heightened%20neuroinflammatory%20responses%20to%20ethanol.
- Publication: https://doi.org/10.1016/j.bbi.2023.12.034
- Collections: [doi-10-1016-j-bbi-2023-12-034](/collections/md/7.md#doi-10-1016-j-bbi-2023-12-034)
- Load: `Catalog().dataset("4uByxHhqpieUJkrC0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-lzqpmltackz2iwso0000"></a>
## Mouse heart

- uid: `lZQpmLTACkz2IwSO0000`
- Page: /datasets/visium-spatial-gene-expression-heart-lzqpmltackz2iwso0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Condition: viral myocarditis
- Modality: RNA
- Observations (spots): 2,278
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s44161-022-00138-1
- Publication: https://doi.org/10.1038/s44161-022-00138-1
- Collections: [doi-10-1038-s44161-022-00138-1](/collections/md/1.md#doi-10-1038-s44161-022-00138-1)
- Load: `Catalog().dataset("lZQpmLTACkz2IwSO0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-n3fvb7vyqosqjeqh0000"></a>
## Mouse liver

- uid: `N3FVb7vyQoSqJEQh0000`
- Page: /datasets/visium-spatial-gene-expression-liver-n3fvb7vyqosqjeqh0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 4,992
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-024-07376-2
- Publication: https://doi.org/10.1038/s41586-024-07376-2
- Collections: [doi-10-1038-s41586-024-07376-2](/collections/md/7.md#doi-10-1038-s41586-024-07376-2)
- Load: `Catalog().dataset("N3FVb7vyQoSqJEQh0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-5qyury0ilgidyymf0000"></a>
## Mouse lung

- uid: `5QyURY0ILGIDYYmf0000`
- Page: /datasets/visium-spatial-gene-expression-lung-5qyury0ilgidyymf0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: pulmonary fibrosis
- Modality: RNA
- Observations (spots): 2,436
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250395
- Publication: https://doi.org/10.1038/s41586-025-08727-3
- Collections: [geo-gse250395](/collections/md/f.md#geo-gse250395)
- Load: `Catalog().dataset("5QyURY0ILGIDYYmf0000").to_sdata()`


<a id="visium-spatial-gene-expression-coronary-artery-h5hx1tnclrweogyi0000"></a>
## Human coronary artery

- uid: `h5hx1tnClrweoGyi0000`
- Page: /datasets/visium-spatial-gene-expression-coronary-artery-h5hx1tnclrweogyi0000/
- Technology: Visium
- Organism: human
- Tissue: coronary artery
- Condition: atherosclerosis
- Modality: RNA
- Observations (spots): 799
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283269
- Publication: https://doi.org/10.3390/ijms26051949
- Collections: [geo-gse283269](/collections/md/3.md#geo-gse283269)
- Load: `Catalog().dataset("h5hx1tnClrweoGyi0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-lylmjo0zujschrft0001"></a>
## Human colon

- uid: `LYlMJO0zujschRfT0001`
- Page: /datasets/visium-spatial-gene-expression-colon-lylmjo0zujschrft0001/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312204
- Publication: https://doi.org/10.1038/s41467-026-71944-5
- Collections: [geo-gse312204](/collections/md/4.md#geo-gse312204)
- Load: `Catalog().dataset("LYlMJO0zujschRfT0001").to_sdata()`


<a id="visium-spatial-gene-expression-brain-vrtuquhipnepuer70000"></a>
## Mouse brain

- uid: `VrtuquHipNEpueR70000`
- Page: /datasets/visium-spatial-gene-expression-brain-vrtuquhipnepuer70000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,896
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313896
- Publication: https://doi.org/10.1016/j.cell.2026.03.013
- Collections: [geo-gse313896](/collections/md/f.md#geo-gse313896)
- Load: `Catalog().dataset("VrtuquHipNEpueR70000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-pffzg1jdqrwrhxpb0000"></a>
## Human entorhinal cortex

- uid: `pFFZG1jdQRWrHxPb0000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-pffzg1jdqrwrhxpb0000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("pFFZG1jdQRWrHxPb0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-eljppdw0my5rnq9c0000"></a>
## Human ovary

- uid: `ELjPpDW0My5rNq9C0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-eljppdw0my5rnq9c0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: classic galactosemia
- Modality: RNA
- Observations (spots): 2,000
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268523
- Publication: https://doi.org/10.1002/ctm2.70043
- Collections: [geo-gse268523](/collections/md/8.md#geo-gse268523)
- Load: `Catalog().dataset("ELjPpDW0My5rNq9C0000").to_sdata()`


<a id="visium-spatial-gene-expression-mammary-gland-7fynhe1u7nqs9vi80000"></a>
## Rat mammary gland

- uid: `7FyNhE1U7nqs9Vi80000`
- Page: /datasets/visium-spatial-gene-expression-mammary-gland-7fynhe1u7nqs9vi80000/
- Technology: Visium
- Organism: rat
- Tissue: mammary gland
- Modality: RNA
- Observations (spots): 3,930
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE253585
- Publication: https://doi.org/10.1016/j.ccell.2026.03.015
- Collections: [geo-gse253585](/collections/md/8.md#geo-gse253585)
- Load: `Catalog().dataset("7FyNhE1U7nqs9Vi80000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-ngsasnnbvgkjsgms0000"></a>
## Human pancreas

- uid: `nGsASNNbVGkJSGmS0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-ngsasnnbvgkjsgms0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,234
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274665
- Publication: https://doi.org/10.1038/s41467-024-54975-8
- Collections: [geo-gse274665](/collections/md/e.md#geo-gse274665)
- Load: `Catalog().dataset("nGsASNNbVGkJSGmS0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreatic-lymph-node-ru4tixgodlpfcnbx0000"></a>
## Human pancreatic lymph node

- uid: `ru4tiXgoDLpfCnbx0000`
- Page: /datasets/visium-spatial-gene-expression-pancreatic-lymph-node-ru4tixgodlpfcnbx0000/
- Technology: Visium
- Organism: human
- Tissue: pancreatic lymph node
- Condition: type 1 diabetes mellitus
- Modality: RNA
- Observations (spots): 600
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296626
- Publication: https://doi.org/10.1101/2025.05.19.654940
- Collections: [geo-gse296626](/collections/md/0.md#geo-gse296626)
- Load: `Catalog().dataset("ru4tiXgoDLpfCnbx0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-eskrkjncf0vqorhd0000"></a>
## Mouse kidney

- uid: `EsKRKjncF0VQOrHD0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-eskrkjncf0vqorhd0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Modality: RNA
- Observations (spots): 3,502
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("EsKRKjncF0VQOrHD0000").to_sdata()`


<a id="spatial-atac-seq-brain-3fbyhv2hqjnexwnt0000"></a>
## Mouse brain

- uid: `3FByhV2HQjNeXWNT0000`
- Page: /datasets/spatial-atac-seq-brain-3fbyhv2hqjnexwnt0000/
- Technology: spatial ATAC-seq
- Organism: mouse
- Tissue: brain
- Modality: Epigenomics
- Observations: 2,498
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE218593
- Publication: https://doi.org/10.1038/s41586-023-05795-1
- Collections: [geo-gse218593](/collections/md/a.md#geo-gse218593)
- Load: `Catalog().dataset("3FByhV2HQjNeXWNT0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ri4vx8ikmtrgos3s0000"></a>
## Human brain

- uid: `ri4vX8iKmtrgos3s0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ri4vx8ikmtrgos3s0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (spots): 797
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341225
- Collections: [geo-gse341225](/collections/md/d.md#geo-gse341225)
- Load: `Catalog().dataset("ri4vX8iKmtrgos3s0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-2ygb0nspxb8jtxne0000"></a>
## Mouse brain

- uid: `2yGb0NsPXb8jTXnE0000`
- Page: /datasets/visium-spatial-gene-expression-brain-2ygb0nspxb8jtxne0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,818
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("2yGb0NsPXb8jTXnE0000").to_sdata()`


<a id="visium-spatial-gene-expression-lymphoid-tissue-14timpvzfr3sgdoz0000"></a>
## Human lymphoid tissue

- uid: `14tImPvZFR3SgDoZ0000`
- Page: /datasets/visium-spatial-gene-expression-lymphoid-tissue-14timpvzfr3sgdoz0000/
- Technology: Visium
- Organism: human
- Tissue: lymphoid tissue
- Condition: non-Hodgkin lymphoma
- Modality: RNA
- Observations (spots): 6,308
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274051
- Publication: https://doi.org/10.1101/2025.10.15.682084
- Collections: [geo-gse274051](/collections/md/9.md#geo-gse274051)
- Load: `Catalog().dataset("14tImPvZFR3SgDoZ0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-bzjlotfdjkog53ef0000"></a>
## Mouse brain

- uid: `BZJloTFdJKoG53EF0000`
- Page: /datasets/visium-spatial-gene-expression-brain-bzjlotfdjkog53ef0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,579
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("BZJloTFdJKoG53EF0000").to_sdata()`


<a id="visium-spatial-gene-expression-parathyroid-gland-w6jhxlhwvy6bavw40000"></a>
## Mouse parathyroid gland

- uid: `W6jhxLhWvY6bAVw40000`
- Page: /datasets/visium-spatial-gene-expression-parathyroid-gland-w6jhxlhwvy6bavw40000/
- Technology: Visium
- Organism: mouse
- Tissue: parathyroid gland
- Condition: primary hyperparathyroidism
- Modality: RNA
- Observations (spots): 1,500
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9008652
- Collections: [geo-gse298115](/collections/md/5.md#geo-gse298115)
- Load: `Catalog().dataset("W6jhxLhWvY6bAVw40000").to_sdata()`


<a id="visium-spatial-gene-expression-thyroid-gland-aud9ouaqwmfkjcjv0000"></a>
## Human thyroid gland

- uid: `aud9OUAQWMfkJCJv0000`
- Page: /datasets/visium-spatial-gene-expression-thyroid-gland-aud9ouaqwmfkjcjv0000/
- Technology: Visium
- Organism: human
- Tissue: thyroid gland
- Condition: Hashimoto thyroiditis
- Modality: RNA
- Observations (spots): 3,647
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7221915
- Collections: [geo-gse230424](/collections/md/1.md#geo-gse230424)
- Load: `Catalog().dataset("aud9OUAQWMfkJCJv0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-4lhhiwcn7qnurgfv0000"></a>
## Mouse liver

- uid: `4lhHIwcn7QNURgFv0000`
- Page: /datasets/visium-spatial-gene-expression-liver-4lhhiwcn7qnurgfv0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 2,286
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5764417
- Collections: [geo-gse192741](/collections/md/4.md#geo-gse192741)
- Load: `Catalog().dataset("4lhHIwcn7QNURgFv0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-yqlimvawxbt0lt7r0000"></a>
## Human pancreas

- uid: `YqlimVAwXBt0Lt7r0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-yqlimvawxbt0lt7r0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,694
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("YqlimVAwXBt0Lt7r0000").to_sdata()`


<a id="visium-spatial-gene-expression-ectocervix-db3dapcvwwrpnjab0000"></a>
## Human ectocervix

- uid: `DB3DApCVWWrPnJAB0000`
- Page: /datasets/visium-spatial-gene-expression-ectocervix-db3dapcvwwrpnjab0000/
- Technology: Visium
- Organism: human
- Tissue: ectocervix
- Modality: RNA
- Observations (spots): 1,831
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9053847
- Collections: [geo-gse300112](/collections/md/2.md#geo-gse300112)
- Load: `Catalog().dataset("DB3DApCVWWrPnJAB0000").to_sdata()`


<a id="visium-spatial-gene-expression-cephalic-vein-crtd76o5jdtdnldh0000"></a>
## Dog cephalic vein

- uid: `cRtd76O5JDtdNLdh0000`
- Page: /datasets/visium-spatial-gene-expression-cephalic-vein-crtd76o5jdtdnldh0000/
- Technology: Visium
- Organism: dog
- Tissue: cephalic vein
- Modality: RNA
- Observations (spots): 493
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189157
- Load: `Catalog().dataset("cRtd76O5JDtdNLdh0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-fuymtafxjgokcwxl0000"></a>
## Mouse heart

- uid: `fuYMtaFxjgOKCWxl0000`
- Page: /datasets/visium-spatial-gene-expression-heart-fuymtafxjgokcwxl0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Modality: RNA
- Observations (spots): 582
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE322766
- Publication: https://doi.org/10.1038/s41586-026-10490-y
- Load: `Catalog().dataset("fuYMtaFxjgOKCWxl0000").to_sdata()`


<a id="visium-spatial-gene-expression-ectocervix-gl82ofmlkuqcd1fj0000"></a>
## Human ectocervix

- uid: `Gl82OfMLKuqCD1fJ0000`
- Page: /datasets/visium-spatial-gene-expression-ectocervix-gl82ofmlkuqcd1fj0000/
- Technology: Visium
- Organism: human
- Tissue: ectocervix
- Modality: RNA
- Observations (spots): 697
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9053840
- Collections: [geo-gse300112](/collections/md/2.md#geo-gse300112)
- Load: `Catalog().dataset("Gl82OfMLKuqCD1fJ0000").to_sdata()`


<a id="merfish-brain-f59de6hrfhcxh8cr0000"></a>
## Mouse brain

- uid: `f59De6hRFHCxH8cr0000`
- Page: /datasets/merfish-brain-f59de6hrfhcxh8cr0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 17,020
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("f59De6hRFHCxH8cr0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-0yftzwyvxzpqll400000"></a>
## Macaque basal ganglion

- uid: `0yftzwYvxZpqll400000`
- Page: /datasets/vizgen-merscope-basal-ganglion-0yftzwyvxzpqll400000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 9
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("0yftzwYvxZpqll400000").to_sdata()`


<a id="mibi-tof-breast-r7ean6bzayqfycng0000"></a>
## Human breast

- uid: `R7eAn6BzayQfycng0000`
- Page: /datasets/mibi-tof-breast-r7ean6bzayqfycng0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,715
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("R7eAn6BzayQfycng0000").to_sdata()`


<a id="mibi-tof-breast-bbaq5tminwftylzd0000"></a>
## Human breast

- uid: `BbaQ5tMINwFtyLZD0000`
- Page: /datasets/mibi-tof-breast-bbaq5tminwftylzd0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,949
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("BbaQ5tMINwFtyLZD0000").to_sdata()`


<a id="vizgen-merscope-white-matter-42vartr8cbmki1jm0000"></a>
## Human white matter

- uid: `42vaRtR8cBMKI1Jm0000`
- Page: /datasets/vizgen-merscope-white-matter-42vartr8cbmki1jm0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (cells): 5,550
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284005
- Publication: https://doi.org/10.1016/j.immuni.2025.10.003
- Collections: [geo-gse284005](/collections/md/2.md#geo-gse284005)
- Load: `Catalog().dataset("42vaRtR8cBMKI1Jm0000").to_sdata()`


<a id="mibi-tof-breast-14thivvpwf5xwja90000"></a>
## Human breast

- uid: `14thIvvpwF5xwja90000`
- Page: /datasets/mibi-tof-breast-14thivvpwf5xwja90000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,281
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("14thIvvpwF5xwja90000").to_sdata()`


<a id="mibi-tof-breast-7uptdl1jy4hbmp1g0000"></a>
## Human breast

- uid: `7UpTdL1JY4hBmP1g0000`
- Page: /datasets/mibi-tof-breast-7uptdl1jy4hbmp1g0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,816
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("7UpTdL1JY4hBmP1g0000").to_sdata()`


<a id="10x-xenium-skin-of-body-h6athoqbypmztwmh0000"></a>
## Human skin of body

- uid: `H6ATHoqBYPMztWmH0000`
- Page: /datasets/10x-xenium-skin-of-body-h6athoqbypmztwmh0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: skin of body
- Condition: acne
- Modality: RNA
- Observations (cells): 10,314
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301280
- Load: `Catalog().dataset("H6ATHoqBYPMztWmH0000").to_sdata()`


<a id="mibi-tof-breast-ulh3jswlggsewsf90000"></a>
## Human breast

- uid: `uLh3JsWlGGSewSF90000`
- Page: /datasets/mibi-tof-breast-ulh3jswlggsewsf90000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,217
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("uLh3JsWlGGSewSF90000").to_sdata()`


<a id="10x-xenium-submandibular-gland-eddxooogclceouqh0000"></a>
## Mouse submandibular gland

- uid: `eDdXoooGcLceouqh0000`
- Page: /datasets/10x-xenium-submandibular-gland-eddxooogclceouqh0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: submandibular gland
- Modality: RNA
- Observations (cells): 215,740
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314531
- Publication: https://doi.org/10.1016/j.isci.2026.117494
- Load: `Catalog().dataset("eDdXoooGcLceouqh0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-g45fuouipnqnojxj0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `G45fUOUIPNqNojXj0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-g45fuouipnqnojxj0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 46,917
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("G45fUOUIPNqNojXj0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-2e8rkjr3rfhmeqwb0000"></a>
## Human lymph node

- uid: `2E8rKjR3rfhMeQwb0000`
- Page: /datasets/phenocycler-fusion-lymph-node-2e8rkjr3rfhmeqwb0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Modality: protein
- Observations (cells): 14,854
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("2E8rKjR3rfhMeQwb0000").to_sdata()`


<a id="10x-xenium-brain-gjzamfcwope0omtt0000"></a>
## Mouse brain

- uid: `gJzaMfcWOpE0OMTT0000`
- Page: /datasets/10x-xenium-brain-gjzamfcwope0omtt0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 99,780
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337270
- Load: `Catalog().dataset("gJzaMfcWOpE0OMTT0000").to_sdata()`


<a id="10x-xenium-hippocampal-formation-stu7sibslp6fkr4g0000"></a>
## Human hippocampal formation

- uid: `stU7sibsLP6fKr4g0000`
- Page: /datasets/10x-xenium-hippocampal-formation-stu7sibslp6fkr4g0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: hippocampal formation
- Modality: RNA
- Observations (cells): 45,812
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335898
- Publication: https://doi.org/10.1016/j.cell.2026.07.007
- Load: `Catalog().dataset("stU7sibsLP6fKr4g0000").to_sdata()`


<a id="10x-xenium-brain-pmhmvdhio3nl04r00000"></a>
## Human brain

- uid: `pMHmvdHIO3nl04R00000`
- Page: /datasets/10x-xenium-brain-pmhmvdhio3nl04r00000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (cells): 3,532
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302502
- Publication: https://doi.org/10.1016/j.immuni.2025.09.018
- Load: `Catalog().dataset("pMHmvdHIO3nl04R00000").to_sdata()`


<a id="merfish-brain-25riuor2e2ekvgov0000"></a>
## Mouse brain

- uid: `25rIUor2e2eKVGov0000`
- Page: /datasets/merfish-brain-25riuor2e2ekvgov0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 28,442
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("25rIUor2e2eKVGov0000").to_sdata()`