# SpatialData-DB datasets, shard e9

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-kidney-m7zdyivv1fms9h9i0000"></a>
## Human kidney

- uid: `M7zdYIvV1fmS9H9i0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-m7zdyivv1fms9h9i0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: clear cell renal carcinoma
- Modality: RNA
- Observations (spots): 2,258
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250163
- Publication: https://doi.org/10.1158/2159-8290.CD-24-0187
- Collections: [geo-gse250163](/collections/md/1.md#geo-gse250163)
- Load: `Catalog().dataset("M7zdYIvV1fmS9H9i0000").to_sdata()`


<a id="visium-spatial-gene-expression-coronary-artery-04cpye1550qpuili0000"></a>
## Human coronary artery

- uid: `04cpyE1550QpUiLI0000`
- Page: /datasets/visium-spatial-gene-expression-coronary-artery-04cpye1550qpuili0000/
- Technology: Visium
- Organism: human
- Tissue: coronary artery
- Condition: atherosclerosis
- Modality: RNA
- Observations (spots): 999
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283269
- Publication: https://doi.org/10.3390/ijms26051949
- Collections: [geo-gse283269](/collections/md/3.md#geo-gse283269)
- Load: `Catalog().dataset("04cpyE1550QpUiLI0000").to_sdata()`


<a id="visium-hd-bone-element-hd32fl2yvdcwyqai0000"></a>
## Human bone element

- uid: `hd32fl2yvDCWYQAI0000`
- Page: /datasets/visium-hd-bone-element-hd32fl2yvdcwyqai0000/
- Technology: Visium HD
- Organism: human
- Tissue: bone element
- Condition: Ewing sarcoma
- Modality: RNA
- Observations (bins): 26,164
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9555997
- Publication: https://doi.org/10.1038/s41591-026-04340-7
- Collections: [geo-gse322640](/collections/md/a.md#geo-gse322640)
- Load: `Catalog().dataset("hd32fl2yvDCWYQAI0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-hawbvcyxzrigix6j0000"></a>
## Mouse intestine

- uid: `hAwbVCYXzrIgix6j0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-hawbvcyxzrigix6j0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 1,744
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s44161-022-00138-1
- Publication: https://doi.org/10.1038/s44161-022-00138-1
- Collections: [doi-10-1038-s44161-022-00138-1](/collections/md/1.md#doi-10-1038-s44161-022-00138-1)
- Load: `Catalog().dataset("hAwbVCYXzrIgix6j0000").to_sdata()`


<a id="visium-spatial-gene-expression-superior-temporal-gyrus-apuzagrwvk4jmz060000"></a>
## Human superior temporal gyrus

- uid: `APuzaGrWvk4jmz060000`
- Page: /datasets/visium-spatial-gene-expression-superior-temporal-gyrus-apuzagrwvk4jmz060000/
- Technology: Visium
- Organism: human
- Tissue: superior temporal gyrus
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 13,670
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE263079
- Publication: https://doi.org/10.1038/s41591-025-03574-1
- Collections: [geo-gse263079](/collections/md/2.md#geo-gse263079)
- Load: `Catalog().dataset("APuzaGrWvk4jmz060000").to_sdata()`


<a id="visium-spatial-gene-expression-ilium-24u9a4syklrta47i0000"></a>
## Human ilium

- uid: `24U9a4SYKLRTA47I0000`
- Page: /datasets/visium-spatial-gene-expression-ilium-24u9a4syklrta47i0000/
- Technology: Visium
- Organism: human
- Tissue: ilium
- Modality: RNA
- Observations (spots): 773
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281317
- Publication: https://doi.org/10.1038/s41586-025-09399-9
- Collections: [geo-gse281317](/collections/md/6.md#geo-gse281317)
- Load: `Catalog().dataset("24U9a4SYKLRTA47I0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-edcxrds05aiktunp0000"></a>
## Mouse prostate gland

- uid: `EDcxRds05aIKtunp0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-edcxrds05aiktunp0000/
- Technology: Visium
- Organism: mouse
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 2,965
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282724
- Publication: https://doi.org/10.1038/s41467-026-71121-8
- Collections: [geo-gse282724](/collections/md/b.md#geo-gse282724)
- Load: `Catalog().dataset("EDcxRds05aIKtunp0000").to_sdata()`


<a id="visium-spatial-gene-expression-locus-ceruleus-jki2c42dcxnjedsv0000"></a>
## Human locus ceruleus

- uid: `jkI2c42DcxnJedsV0000`
- Page: /datasets/visium-spatial-gene-expression-locus-ceruleus-jki2c42dcxnjedsv0000/
- Technology: Visium
- Organism: human
- Tissue: locus ceruleus
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307866
- Publication: https://doi.org/10.1101/2025.10.29.685354
- Collections: [geo-gse307866](/collections/md/9.md#geo-gse307866)
- Load: `Catalog().dataset("jkI2c42DcxnJedsV0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-ohynx0q3gis2ket50000"></a>
## Human kidney

- uid: `OHynx0Q3GIs2KEt50000`
- Page: /datasets/visium-spatial-gene-expression-kidney-ohynx0q3gis2ket50000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 580
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("OHynx0Q3GIs2KEt50000").to_sdata()`


<a id="vizgen-merscope-brain-jheh3aaxvlcgzkck0000"></a>
## Mouse brain

- uid: `jheH3AaxVlCGZKck0000`
- Page: /datasets/vizgen-merscope-brain-jheh3aaxvlcgzkck0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 139,637
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330849
- Publication: https://doi.org/10.1038/s41593-026-02387-w
- Load: `Catalog().dataset("jheH3AaxVlCGZKck0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-of5zunhvfcjupuna0000"></a>
## Mouse lung

- uid: `of5ZuNHVFCJupUNa0000`
- Page: /datasets/visium-spatial-gene-expression-lung-of5zunhvfcjupuna0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Modality: RNA
- Observations (spots): 7,088
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE254861
- Publication: https://doi.org/10.1126/science.ads7910
- Collections: [geo-gse254861](/collections/md/a.md#geo-gse254861)
- Load: `Catalog().dataset("of5ZuNHVFCJupUNa0000").to_sdata()`


<a id="10x-xenium-hair-follicle-j6atwbgov2w3pdfv0000"></a>
## Mouse hair follicle

- uid: `j6aTWbgoV2W3PdfV0000`
- Page: /datasets/10x-xenium-hair-follicle-j6atwbgov2w3pdfv0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: hair follicle
- Condition: injury
- Modality: RNA
- Observations (cells): 32,760
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8546224
- Publication: https://doi.org/10.1172/JCI172595
- Collections: [geo-gse278431](/collections/md/c.md#geo-gse278431)
- Load: `Catalog().dataset("j6aTWbgoV2W3PdfV0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-empsa6owib8ftxg80000"></a>
## Human lung

- uid: `EMpsA6OwIB8FTxG80000`
- Page: /datasets/visium-spatial-gene-expression-lung-empsa6owib8ftxg80000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 4,213
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE271370
- Collections: [geo-gse271370](/collections/md/5.md#geo-gse271370)
- Load: `Catalog().dataset("EMpsA6OwIB8FTxG80000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-2vnrdtgyfj393ugt0000"></a>
## Human liver

- uid: `2vnrdtGYfJ393uGT0000`
- Page: /datasets/visium-spatial-gene-expression-liver-2vnrdtgyfj393ugt0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: liver cancer
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312327
- Publication: https://doi.org/10.1038/s44320-026-00205-w
- Collections: [geo-gse312327](/collections/md/e.md#geo-gse312327)
- Load: `Catalog().dataset("2vnrdtGYfJ393uGT0000").to_sdata()`


<a id="visium-spatial-gene-expression-unknown-91sas33dmebksow20000"></a>
## Human unknown

- uid: `91sas33dMebksoW20000`
- Page: /datasets/visium-spatial-gene-expression-unknown-91sas33dmebksow20000/
- Technology: Visium
- Organism: human
- Tissue: unknown
- Condition: diffuse large B-cell lymphoma
- Modality: RNA
- Observations (spots): 10,770
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9980526
- Collections: [geo-gse344506](/collections/md/1.md#geo-gse344506)
- Load: `Catalog().dataset("91sas33dMebksoW20000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-marrow-wa2aylrkbtwnsyvd0000"></a>
## Human bone marrow

- uid: `Wa2AYLrkbTwnsYvd0000`
- Page: /datasets/visium-spatial-gene-expression-bone-marrow-wa2aylrkbtwnsyvd0000/
- Technology: Visium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (spots): 876
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269875
- Publication: https://doi.org/10.1111/acel.70475
- Collections: [geo-gse269875](/collections/md/4.md#geo-gse269875)
- Load: `Catalog().dataset("Wa2AYLrkbTwnsYvd0000").to_sdata()`


<a id="10x-xenium-rectum-2dpatimxdlvyejx00000"></a>
## Human rectum

- uid: `2dpaTIMXDLvYeJx00000`
- Page: /datasets/10x-xenium-rectum-2dpatimxdlvyejx00000/
- Technology: 10x Xenium
- Organism: human
- Tissue: rectum
- Condition: Crohn disease
- Modality: RNA
- Observations (cells): 37,372
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312420
- Publication: https://doi.org/10.1038/s41467-026-72482-w
- Load: `Catalog().dataset("2dpaTIMXDLvYeJx00000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-36jaadspdaz82zy60000"></a>
## Human entorhinal cortex

- uid: `36jaaDSPDaZ82Zy60000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-36jaadspdaz82zy60000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("36jaaDSPDaZ82Zy60000").to_sdata()`


<a id="mibi-tof-breast-vvojxsxs1wfsffjv0000"></a>
## Human breast

- uid: `VvoJxsxS1wfSFFJv0000`
- Page: /datasets/mibi-tof-breast-vvojxsxs1wfsffjv0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,617
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("VvoJxsxS1wfSFFJv0000").to_sdata()`


<a id="vizgen-merscope-white-matter-uoav3fnmqqhptdse0000"></a>
## Human white matter

- uid: `uoAv3FnMQQHPtdse0000`
- Page: /datasets/vizgen-merscope-white-matter-uoav3fnmqqhptdse0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (cells): 19,373
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284005
- Publication: https://doi.org/10.1016/j.immuni.2025.10.003
- Collections: [geo-gse284005](/collections/md/2.md#geo-gse284005)
- Load: `Catalog().dataset("uoAv3FnMQQHPtdse0000").to_sdata()`


<a id="mibi-tof-lymph-node-5fcccvadkcbog8jt0000"></a>
## Human lymph node

- uid: `5fccCvADkcBoG8Jt0000`
- Page: /datasets/mibi-tof-lymph-node-5fcccvadkcbog8jt0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 356
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("5fccCvADkcBoG8Jt0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-colon-bm4yjrxpu4kya9ah0000"></a>
## Mouse colon

- uid: `bm4yJRXpU4kYA9Ah0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-colon-bm4yjrxpu4kya9ah0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: colon
- Modality: Metabolomics
- Observations: 127,806
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2025-10-29_17h05m58s
- Load: `Catalog().dataset("bm4yJRXpU4kYA9Ah0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-lung-hkytydwrjnefqecm0000"></a>
## Mouse lung

- uid: `hkYtYdWRJNefqECm0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-lung-hkytydwrjnefqecm0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: lung
- Modality: Metabolomics
- Observations: 760,529
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2021-11-09_15h54m35s
- Load: `Catalog().dataset("hkYtYdWRJNefqECm0000").to_sdata()`


<a id="mibi-tof-lymph-node-tbnbkif3enpuiuhx0000"></a>
## Human lymph node

- uid: `TbnBkiF3ENPuiuHx0000`
- Page: /datasets/mibi-tof-lymph-node-tbnbkif3enpuiuhx0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,741
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("TbnBkiF3ENPuiuHx0000").to_sdata()`


<a id="10x-xenium-ovary-y0zkmv4b6gt4hxv70000"></a>
## Human ovary

- uid: `Y0zKMV4B6GT4Hxv70000`
- Page: /datasets/10x-xenium-ovary-y0zkmv4b6gt4hxv70000/
- Technology: 10x Xenium
- Organism: human
- Tissue: ovary
- Condition: ovarian cancer
- Modality: RNA
- Observations (cells): 388,133
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE344584
- Load: `Catalog().dataset("Y0zKMV4B6GT4Hxv70000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-jrxsnd6def8dkzw20000"></a>
## Human kidney

- uid: `jrxsnd6dEF8dkzW20000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-jrxsnd6def8dkzw20000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 22,260
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-09-11_23h46m54s
- Load: `Catalog().dataset("jrxsnd6dEF8dkzW20000").to_sdata()`