# SpatialData-DB datasets, shard dd

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-breast-wxdhtrxzofiguply0000"></a>
## Human breast

- uid: `wXDHTRXZOfIgUPLy0000`
- Page: /datasets/visium-hd-breast-wxdhtrxzofiguply0000/
- Technology: Visium HD
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (bins): 472,859
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-human-breast-cancer-fresh-frozen
- Load: `Catalog().dataset("wXDHTRXZOfIgUPLy0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-hd3xfywtqkhojj3d0000"></a>
## Human pancreas

- uid: `hD3XfYwTQkHOJJ3D0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-hd3xfywtqkhojj3d0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,996
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("hD3XfYwTQkHOJJ3D0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-fsjxu3ewvhex7aee0000"></a>
## Human kidney

- uid: `Fsjxu3EWvHeX7Aee0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-fsjxu3ewvhex7aee0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Modality: RNA
- Observations (spots): 3,007
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10356613/
- Publication: https://doi.org/10.1038/s41586-023-05769-3
- Collections: [doi-10-1038-s41586-023-05769-3](/collections/md/e.md#doi-10-1038-s41586-023-05769-3)
- Load: `Catalog().dataset("Fsjxu3EWvHeX7Aee0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-fr0zpzuumblr5jtx0000"></a>
## Mouse spinal cord

- uid: `fr0zPZuUMBlr5jtx0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-fr0zpzuumblr5jtx0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 269
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("fr0zPZuUMBlr5jtx0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-8blar0pueox5sjik0000"></a>
## Mouse spinal cord

- uid: `8BLaR0pUEOX5sJiK0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-8blar0pueox5sjik0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 231
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("8BLaR0pUEOX5sJiK0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-hiso1d9aunez97tt0000"></a>
## Human skin of body

- uid: `HiSO1d9AuNez97tT0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-hiso1d9aunez97tt0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: atopic eczema
- Modality: RNA
- Observations (spots): 1,350
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("HiSO1d9AuNez97tT0000").to_sdata()`


<a id="visium-hd-kidney-evwiddojjpqrifei0000"></a>
## Human kidney

- uid: `EVWiDDojJpQRiFeI0000`
- Page: /datasets/visium-hd-kidney-evwiddojjpqrifei0000/
- Technology: Visium HD
- Organism: human
- Tissue: kidney
- Condition: type 2 diabetes mellitus
- Modality: RNA
- Observations (bins): 175,742
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9467251
- Publication: https://doi.org/10.1038/s41392-026-02653-0
- Collections: [geo-gse317226](/collections/md/0.md#geo-gse317226)
- Load: `Catalog().dataset("EVWiDDojJpQRiFeI0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-ptwrhkvos38cnohw0000"></a>
## Mouse liver

- uid: `ptwrHKvOS38CNoHW0000`
- Page: /datasets/visium-spatial-gene-expression-liver-ptwrhkvos38cnohw0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 1,788
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE318726
- Collections: [geo-gse318726](/collections/md/b.md#geo-gse318726)
- Load: `Catalog().dataset("ptwrHKvOS38CNoHW0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-jlez78yjxm15cbnk0001"></a>
## Mouse spleen

- uid: `jleZ78yJXM15CbnK0001`
- Page: /datasets/visium-spatial-gene-expression-spleen-jlez78yjxm15cbnk0001/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Modality: RNA
- Observations (spots): 625
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("jleZ78yJXM15CbnK0001").to_sdata()`


<a id="visium-spatial-gene-expression-lymph-node-6xyddmjh5njl9u3q0000"></a>
## Human lymph node

- uid: `6xyDdmJH5njL9u3q0000`
- Page: /datasets/visium-spatial-gene-expression-lymph-node-6xyddmjh5njl9u3q0000/
- Technology: Visium
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE276542
- Publication: https://doi.org/10.1080/2162402X.2026.2660418
- Collections: [geo-gse276542](/collections/md/2.md#geo-gse276542)
- Load: `Catalog().dataset("6xyDdmJH5njL9u3q0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-25dipwwaclbblwzt0000"></a>
## Mouse brain

- uid: `25DipWwACLBBLwZt0000`
- Page: /datasets/visium-spatial-gene-expression-brain-25dipwwaclbblwzt0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,320
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("25DipWwACLBBLwZt0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-srimdbspbpazelpk0000"></a>
## Human prostate gland

- uid: `srImDbSPBpazelPk0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-srimdbspbpazelpk0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 1,650
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("srImDbSPBpazelPk0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ozdwwqhzyp4dvxis0000"></a>
## Mouse brain

- uid: `OzDWwQHzyP4DvxiS0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ozdwwqhzyp4dvxis0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,018
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("OzDWwQHzyP4DvxiS0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-tw3c6lyks5djh0wv0000"></a>
## Human brain

- uid: `tW3C6LyKs5Djh0WV0000`
- Page: /datasets/visium-spatial-gene-expression-brain-tw3c6lyks5djh0wv0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (spots): 8,862
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8855712
- Collections: [geo-gse292299](/collections/md/c.md#geo-gse292299)
- Load: `Catalog().dataset("tW3C6LyKs5Djh0WV0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-apgo2jcqhzexxzdq0000"></a>
## Human pancreas

- uid: `apGO2jCqhzeXxzdq0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-apgo2jcqhzexxzdq0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 1,829
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8714179
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("apGO2jCqhzeXxzdq0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-cf6loovb1qcdhfu90000"></a>
## Human pancreas

- uid: `Cf6Loovb1QCDhFU90000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-cf6loovb1qcdhfu90000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,671
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("Cf6Loovb1QCDhFU90000").to_sdata()`


<a id="10x-xenium-kidney-xtduriwbektaruti0000"></a>
## Human kidney

- uid: `xtDuriWbektArUTi0000`
- Page: /datasets/10x-xenium-kidney-xtduriwbektaruti0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Modality: RNA
- Observations (cells): 17,935
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE286186
- Collections: [geo-gse286184](/collections/md/4.md#geo-gse286184)
- Load: `Catalog().dataset("xtDuriWbektArUTi0000").to_sdata()`


<a id="mibi-tof-breast-tjfg0hpozcnynnmn0000"></a>
## Human breast

- uid: `tJFG0hPozCnYNnMn0000`
- Page: /datasets/mibi-tof-breast-tjfg0hpozcnynnmn0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,248
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("tJFG0hPozCnYNnMn0000").to_sdata()`


<a id="mibi-tof-breast-rfrtsqlle4vnacqy0000"></a>
## Human breast

- uid: `RfRTsqLLe4vNACQy0000`
- Page: /datasets/mibi-tof-breast-rfrtsqlle4vnacqy0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,120
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("RfRTsqLLe4vNACQy0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-nuafgkcvza3v7zv30000"></a>
## Human kidney

- uid: `nUafgkCVZa3v7Zv30000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-nuafgkcvza3v7zv30000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 2,400
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-01-31_23h04m26s
- Load: `Catalog().dataset("nUafgkCVZa3v7Zv30000").to_sdata()`


<a id="mibi-tof-breast-v6sa6ozn6jgqgbq50000"></a>
## Human breast

- uid: `V6SA6ozN6JgQgbq50000`
- Page: /datasets/mibi-tof-breast-v6sa6ozn6jgqgbq50000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,910
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("V6SA6ozN6JgQgbq50000").to_sdata()`


<a id="mibi-tof-breast-hqe2zjchuku0bu4a0000"></a>
## Human breast

- uid: `hqe2ZJchUKU0BU4A0000`
- Page: /datasets/mibi-tof-breast-hqe2zjchuku0bu4a0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,237
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("hqe2ZJchUKU0BU4A0000").to_sdata()`


<a id="mibi-tof-breast-sksz99iqml7hsmkc0000"></a>
## Human breast

- uid: `sksz99IQMl7hsMKC0000`
- Page: /datasets/mibi-tof-breast-sksz99iqml7hsmkc0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 8,852
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("sksz99IQMl7hsMKC0000").to_sdata()`


<a id="10x-xenium-brain-vdvigkexmew6jlzw0000"></a>
## Human brain

- uid: `VDViGKExmEw6jlzW0000`
- Page: /datasets/10x-xenium-brain-vdvigkexmew6jlzw0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (cells): 40,976
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260452
- Publication: https://doi.org/10.1038/s41586-026-10214-2
- Load: `Catalog().dataset("VDViGKExmEw6jlzW0000").to_sdata()`


<a id="vizgen-merscope-brain-6o0hkr7hvfgrxes30000"></a>
## Mouse brain

- uid: `6O0HKr7HvfgRXes30000`
- Page: /datasets/vizgen-merscope-brain-6o0hkr7hvfgrxes30000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 20,040
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("6O0HKr7HvfgRXes30000").to_sdata()`