# SpatialData-DB datasets, shard d9

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-kidney-9z8u3dix4egkso0n0000"></a>
## Mouse kidney

- uid: `9z8u3Dix4eGkso0N0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-9z8u3dix4egkso0n0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Modality: RNA
- Observations (spots): 4,009
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("9z8u3Dix4eGkso0N0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-ulz65vlzwm9xkexp0000"></a>
## Human liver

- uid: `ulz65Vlzwm9xkExp0000`
- Page: /datasets/visium-spatial-gene-expression-liver-ulz65vlzwm9xkexp0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: breast carcinoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268427
- Publication: https://doi.org/10.1038/s42003-024-07043-2
- Collections: [geo-gse268427](/collections/md/c.md#geo-gse268427)
- Load: `Catalog().dataset("ulz65Vlzwm9xkExp0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-ns3lqmct0dtdje4s0000"></a>
## Mouse spinal cord

- uid: `ns3LqMct0dtdjE4s0000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-ns3lqmct0dtdje4s0000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Modality: RNA
- Observations (spots): 642
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05385-7
- Publication: https://doi.org/10.1038/s41586-022-05385-7
- Collections: [doi-10-1038-s41586-022-05385-7](/collections/md/a.md#doi-10-1038-s41586-022-05385-7)
- Load: `Catalog().dataset("ns3LqMct0dtdjE4s0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-qte30aubhwsgvzxr0000"></a>
## Human skin of body

- uid: `qtE30AuBhWsGVzXR0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-qte30aubhwsgvzxr0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: atopic eczema
- Modality: RNA
- Observations (spots): 697
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("qtE30AuBhWsGVzXR0000").to_sdata()`


<a id="visium-spatial-gene-expression-synovial-membrane-of-synovial-joint-3vwroivzdeehtcgo0000"></a>
## Human synovial membrane of synovial joint

- uid: `3vwrOIVzdEeHTCGO0000`
- Page: /datasets/visium-spatial-gene-expression-synovial-membrane-of-synovial-joint-3vwroivzdeehtcgo0000/
- Technology: Visium
- Organism: human
- Tissue: synovial membrane of synovial joint
- Condition: rheumatoid arthritis
- Modality: RNA
- Observations (spots): 1,878
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE232734
- Publication: https://doi.org/10.1126/sciimmunol.adm7800
- Collections: [geo-gse232734](/collections/md/8.md#geo-gse232734)
- Load: `Catalog().dataset("3vwrOIVzdEeHTCGO0000").to_sdata()`


<a id="visium-hd-kidney-onzzwz2qfhhgmn2r0000"></a>
## Human kidney

- uid: `onZzWz2qfhhgMN2R0000`
- Page: /datasets/visium-hd-kidney-onzzwz2qfhhgmn2r0000/
- Technology: Visium HD
- Organism: human
- Tissue: kidney
- Condition: type 2 diabetes mellitus
- Modality: RNA
- Observations (bins): 215,426
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9467250
- Publication: https://doi.org/10.1038/s41392-026-02653-0
- Collections: [geo-gse317226](/collections/md/0.md#geo-gse317226)
- Load: `Catalog().dataset("onZzWz2qfhhgMN2R0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-yb3taiavbdxwxgq70000"></a>
## Mouse brain

- uid: `Yb3TaIAvbDxWXGq70000`
- Page: /datasets/visium-spatial-gene-expression-brain-yb3taiavbdxwxgq70000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,494
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE249403
- Publication: https://doi.org/10.1038/s41593-026-02420-y
- Collections: [geo-gse249403](/collections/md/9.md#geo-gse249403)
- Load: `Catalog().dataset("Yb3TaIAvbDxWXGq70000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-bpzhufk4eq1g0u2y0000"></a>
## Mouse lung

- uid: `bPZHUfK4eq1g0U2y0000`
- Page: /datasets/visium-spatial-gene-expression-lung-bpzhufk4eq1g0u2y0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: lung adenocarcinoma
- Modality: RNA
- Observations (spots): 2,947
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE202159
- Publication: https://doi.org/10.1038/s41590-023-01504-2
- Collections: [geo-gse215361](/collections/md/1.md#geo-gse215361)
- Load: `Catalog().dataset("bPZHUfK4eq1g0U2y0000").to_sdata()`


<a id="merfish-brain-5gbphmhxpaf4l9in0000"></a>
## Mouse brain

- uid: `5GBPhMHxPAF4L9in0000`
- Page: /datasets/merfish-brain-5gbphmhxpaf4l9in0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 14,975
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("5GBPhMHxPAF4L9in0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-ln8tmhiqrpylorio0000"></a>
## Human ovary

- uid: `LN8TMHIQRPyloriO0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-ln8tmhiqrpylorio0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 2,026
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288483
- Publication: https://doi.org/10.1038/s41698-025-01122-1
- Collections: [geo-gse288483](/collections/md/e.md#geo-gse288483)
- Load: `Catalog().dataset("LN8TMHIQRPyloriO0000").to_sdata()`


<a id="visium-spatial-gene-expression-cerebellum-9n1bwakv4oqxfryq0000"></a>
## Human cerebellum

- uid: `9n1bWakV4OqXfryq0000`
- Page: /datasets/visium-spatial-gene-expression-cerebellum-9n1bwakv4oqxfryq0000/
- Technology: Visium
- Organism: human
- Tissue: cerebellum
- Condition: medulloblastoma
- Modality: RNA
- Observations (spots): 3,817
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306506
- Publication: https://doi.org/10.3390/ijms27135720
- Collections: [geo-gse306506](/collections/md/7.md#geo-gse306506)
- Load: `Catalog().dataset("9n1bWakV4OqXfryq0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-id8zfg1voynd6jqk0000"></a>
## Human basal ganglion

- uid: `id8Zfg1VoynD6JQk0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-id8zfg1voynd6jqk0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 56,204
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Load: `Catalog().dataset("id8Zfg1VoynD6JQk0000").to_sdata()`


<a id="10x-xenium-uterus-zenbbewhvvjzbhsy0000"></a>
## Mouse uterus

- uid: `zEnbbEWHVvjzBHSY0000`
- Page: /datasets/10x-xenium-uterus-zenbbewhvvjzbhsy0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: uterus
- Modality: RNA
- Observations (cells): 221,278
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9457933
- Publication: https://doi.org/10.1073/pnas.2600524123
- Collections: [geo-gse316662](/collections/md/f.md#geo-gse316662)
- Load: `Catalog().dataset("zEnbbEWHVvjzBHSY0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-dtxocbcupjpn242d0001"></a>
## Human dorsolateral prefrontal cortex

- uid: `dtXOCbCUPjpN242d0001`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-dtxocbcupjpn242d0001/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("dtXOCbCUPjpN242d0001").to_sdata()`


<a id="visium-spatial-gene-expression-lung-pst4kavz8dc8axnk0001"></a>
## Human lung

- uid: `Pst4kAVZ8dC8AxnK0001`
- Page: /datasets/visium-spatial-gene-expression-lung-pst4kavz8dc8axnk0001/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: sarcoidosis
- Modality: RNA
- Observations (spots): 4,991
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288607
- Collections: [geo-gse288607](/collections/md/6.md#geo-gse288607)
- Load: `Catalog().dataset("Pst4kAVZ8dC8AxnK0001").to_sdata()`


<a id="visium-spatial-gene-expression-lung-qxh8yhkwaem3khpy0000"></a>
## Human lung

- uid: `qXh8yhkwAEm3KhPy0000`
- Page: /datasets/visium-spatial-gene-expression-lung-qxh8yhkwaem3khpy0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: chronic obstructive pulmonary disease
- Modality: RNA
- Observations (spots): 1,314
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE318039
- Publication: https://doi.org/10.1186/s40364-026-00960-w
- Collections: [geo-gse318039](/collections/md/6.md#geo-gse318039)
- Load: `Catalog().dataset("qXh8yhkwAEm3KhPy0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-hvhhwdhyz4sk4tma0000"></a>
## Mouse brain

- uid: `HvhhWDHYZ4Sk4tMA0000`
- Page: /datasets/visium-spatial-gene-expression-brain-hvhhwdhyz4sk4tma0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243140
- Collections: [geo-gse243140](/collections/md/5.md#geo-gse243140)
- Load: `Catalog().dataset("HvhhWDHYZ4Sk4tMA0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-dwvoqemwvtdg2piw0000"></a>
## Mouse liver

- uid: `DwvOqemWVTDG2piw0000`
- Page: /datasets/visium-spatial-gene-expression-liver-dwvoqemwvtdg2piw0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 1,147
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE236424
- Collections: [geo-gse236424](/collections/md/3.md#geo-gse236424)
- Load: `Catalog().dataset("DwvOqemWVTDG2piw0000").to_sdata()`


<a id="visium-spatial-gene-expression-skeletal-muscle-tissue-t93c0sgb1kwhayii0000"></a>
## Mouse skeletal muscle tissue

- uid: `t93C0SgB1KWHAYii0000`
- Page: /datasets/visium-spatial-gene-expression-skeletal-muscle-tissue-t93c0sgb1kwhayii0000/
- Technology: Visium
- Organism: mouse
- Tissue: skeletal muscle tissue
- Modality: RNA
- Observations (spots): 2,745
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310921
- Collections: [geo-gse310921](/collections/md/b.md#geo-gse310921)
- Load: `Catalog().dataset("t93C0SgB1KWHAYii0000").to_sdata()`


<a id="10x-xenium-subcutaneous-adipose-tissue-obgjcckoaotxzzhl0000"></a>
## Human subcutaneous adipose tissue

- uid: `OBGJcCkOaOTXzZhL0000`
- Page: /datasets/10x-xenium-subcutaneous-adipose-tissue-obgjcckoaotxzzhl0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: subcutaneous adipose tissue
- Condition: obesity disorder
- Modality: RNA
- Observations (cells): 4,860
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295862
- Publication: https://doi.org/10.1038/s41586-025-09233-2
- Load: `Catalog().dataset("OBGJcCkOaOTXzZhL0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-p99mtokbgh5mpqpm0000"></a>
## Human pancreas

- uid: `p99MtokBGH5mPQpM0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-p99mtokbgh5mpqpm0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,952
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452871
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("p99MtokBGH5mPQpM0000").to_sdata()`


<a id="mibi-tof-breast-5avsrxby7bpuk3bw0000"></a>
## Human breast

- uid: `5avsrXbY7bPuK3BW0000`
- Page: /datasets/mibi-tof-breast-5avsrxby7bpuk3bw0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,633
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("5avsrXbY7bPuK3BW0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-l1hg0fq1l1kzz3ls0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `L1HG0fQ1L1KZZ3Ls0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-l1hg0fq1l1kzz3ls0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: major depressive disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("L1HG0fQ1L1KZZ3Ls0000").to_sdata()`


<a id="merfish-brain-ov4alhl6qenvdn2a0000"></a>
## Mouse brain

- uid: `oV4aLhL6QENVDn2a0000`
- Page: /datasets/merfish-brain-ov4alhl6qenvdn2a0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 9,533
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("oV4aLhL6QENVDn2a0000").to_sdata()`


<a id="imaging-mass-cytometry-kidney-ykkcdchodgn1tpow0000"></a>
## Human kidney

- uid: `yKKCDcHOdgN1tpOw0000`
- Page: /datasets/imaging-mass-cytometry-kidney-ykkcdchodgn1tpow0000/
- Technology: Imaging Mass Cytometry
- Organism: human
- Tissue: kidney
- Condition: acute kidney failure
- Modality: protein
- Observations: 2,655
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD3694
- Collections: [bia-s-biad3694](/collections/md/7.md#bia-s-biad3694)
- Load: `Catalog().dataset("yKKCDcHOdgN1tpOw0000").to_sdata()`


<a id="mibi-tof-lymph-node-k3ory4qd2euqlmnh0000"></a>
## Human lymph node

- uid: `K3orY4QD2euqlmnh0000`
- Page: /datasets/mibi-tof-lymph-node-k3ory4qd2euqlmnh0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 6,567
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("K3orY4QD2euqlmnh0000").to_sdata()`


<a id="mibi-tof-breast-br6lctyae4kebkvr0000"></a>
## Human breast

- uid: `Br6LcTyAE4kEbKVR0000`
- Page: /datasets/mibi-tof-breast-br6lctyae4kebkvr0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,305
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("Br6LcTyAE4kEbKVR0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-on8xvrmtkgih7lwu0000"></a>
## Human lymph node

- uid: `on8xVrmTKGiH7lwu0000`
- Page: /datasets/phenocycler-fusion-lymph-node-on8xvrmtkgih7lwu0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 20,806
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("on8xVrmTKGiH7lwu0000").to_sdata()`


<a id="10x-xenium-brain-ixerpknioc89ec9r0000"></a>
## Human brain

- uid: `ixeRpknioc89ec9r0000`
- Page: /datasets/10x-xenium-brain-ixerpknioc89ec9r0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (cells): 10,532
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302502
- Publication: https://doi.org/10.1016/j.immuni.2025.09.018
- Load: `Catalog().dataset("ixeRpknioc89ec9r0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-xxdw00kc90ggxtl30000"></a>
## Human dorsolateral prefrontal cortex

- uid: `xxdW00kC90GGxTL30000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-xxdw00kc90ggxtl30000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 56,715
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("xxdW00kC90GGxTL30000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-kquu84uimi4zl2ic0000"></a>
## Human kidney

- uid: `KquU84uImI4ZL2iC0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-kquu84uimi4zl2ic0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 6,205
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-06-27_00h17m51s
- Load: `Catalog().dataset("KquU84uImI4ZL2iC0000").to_sdata()`