# SpatialData-DB datasets, shard d7

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-breast-xvtnlbrxrtaligdt0000"></a>
## Human breast

- uid: `XVtNLBrXRTaLIGDT0000`
- Page: /datasets/visium-spatial-gene-expression-breast-xvtnlbrxrtaligdt0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 1,405
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE213688
- Publication: https://doi.org/10.1016/j.labinv.2023.100258
- Collections: [geo-gse213688](/collections/md/5.md#geo-gse213688)
- Load: `Catalog().dataset("XVtNLBrXRTaLIGDT0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-pc3v3otis2mvqtus0000"></a>
## Human kidney

- uid: `pC3V3oTis2mvqTuS0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-pc3v3otis2mvqtus0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: clear cell renal carcinoma
- Modality: RNA
- Observations (spots): 1,659
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250163
- Publication: https://doi.org/10.1158/2159-8290.CD-24-0187
- Collections: [geo-gse250163](/collections/md/1.md#geo-gse250163)
- Load: `Catalog().dataset("pC3V3oTis2mvqTuS0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-qzot1k4k6v2yshko0000"></a>
## Human liver

- uid: `Qzot1k4K6v2ysHkO0000`
- Page: /datasets/visium-spatial-gene-expression-liver-qzot1k4k6v2yshko0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatoblastoma
- Modality: RNA
- Observations (spots): 4,439
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE261958
- Publication: https://doi.org/10.1016/j.jhep.2025.01.031
- Collections: [geo-gse261958](/collections/md/b.md#geo-gse261958)
- Load: `Catalog().dataset("Qzot1k4K6v2ysHkO0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-m1v9wq5nkljjddm00000"></a>
## Mouse brain

- uid: `M1v9WQ5nKljJDdM00000`
- Page: /datasets/visium-spatial-gene-expression-brain-m1v9wq5nkljjddm00000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,735
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/37591239/
- Publication: https://doi.org/10.1016/j.cell.2023.07.027
- Collections: [doi-10-1016-j-cell-2023-07-027](/collections/md/e.md#doi-10-1016-j-cell-2023-07-027)
- Load: `Catalog().dataset("M1v9WQ5nKljJDdM00000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-6tfv5dlo0lxyiikf0000"></a>
## Mouse liver

- uid: `6TFV5DLO0LxYiIkf0000`
- Page: /datasets/visium-spatial-gene-expression-liver-6tfv5dlo0lxyiikf0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: hepatoblastoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-023-39717-6
- Publication: https://doi.org/10.1038/s41467-023-39717-6
- Collections: [doi-10-1038-s41467-023-39717-6](/collections/md/4.md#doi-10-1038-s41467-023-39717-6)
- Load: `Catalog().dataset("6TFV5DLO0LxYiIkf0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-kehsjvgj8gclnqcb0000"></a>
## Human lung

- uid: `KEHsjvgJ8gClnqCB0000`
- Page: /datasets/visium-spatial-gene-expression-lung-kehsjvgj8gclnqcb0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 2,501
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41588-022-01243-4
- Publication: https://doi.org/10.1038/s41588-022-01243-4
- Collections: [doi-10-1038-s41588-022-01243-4](/collections/md/9.md#doi-10-1038-s41588-022-01243-4)
- Load: `Catalog().dataset("KEHsjvgJ8gClnqCB0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-cqeipyovebxzzbn60000"></a>
## Human heart

- uid: `CqEiPYoVebxZZBN60000`
- Page: /datasets/visium-spatial-gene-expression-heart-cqeipyovebxzzbn60000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 2,562
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("CqEiPYoVebxZZBN60000").to_sdata()`


<a id="visium-spatial-gene-expression-uterus-rowqoucrfjdciams0000"></a>
## Mouse uterus

- uid: `ROWqOucrFJdcIAmS0000`
- Page: /datasets/visium-spatial-gene-expression-uterus-rowqoucrfjdciams0000/
- Technology: Visium
- Organism: mouse
- Tissue: uterus
- Modality: RNA
- Observations (spots): 343
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269332
- Publication: https://doi.org/10.1002/path.6470
- Collections: [geo-gse269332](/collections/md/e.md#geo-gse269332)
- Load: `Catalog().dataset("ROWqOucrFJdcIAmS0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-78uxjj7v6vu1x4pa0000"></a>
## Mouse brain

- uid: `78UXjJ7v6vU1X4pa0000`
- Page: /datasets/visium-spatial-gene-expression-brain-78uxjj7v6vu1x4pa0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 2,416
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE203424
- Publication: https://doi.org/10.1002/alz.12821
- Collections: [geo-gse203424](/collections/md/7.md#geo-gse203424)
- Load: `Catalog().dataset("78UXjJ7v6vU1X4pa0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-azzqpojlm7jmkmqe0000"></a>
## Mouse brain

- uid: `AzZqPOJlM7JMKMqe0000`
- Page: /datasets/visium-spatial-gene-expression-brain-azzqpojlm7jmkmqe0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 728
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285858
- Publication: https://doi.org/10.1016/j.neuron.2025.05.014
- Collections: [geo-gse285858](/collections/md/d.md#geo-gse285858)
- Load: `Catalog().dataset("AzZqPOJlM7JMKMqe0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-qdfvzdt0b0my6sti0000"></a>
## Mouse brain

- uid: `qDFVzDT0b0My6stI0000`
- Page: /datasets/visium-spatial-gene-expression-brain-qdfvzdt0b0my6sti0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243140
- Collections: [geo-gse243140](/collections/md/5.md#geo-gse243140)
- Load: `Catalog().dataset("qDFVzDT0b0My6stI0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-zgyp6twcrnjhxfww0000"></a>
## Mouse brain

- uid: `zgyp6TwCrnjhXfww0000`
- Page: /datasets/visium-spatial-gene-expression-brain-zgyp6twcrnjhxfww0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243140
- Collections: [geo-gse243140](/collections/md/5.md#geo-gse243140)
- Load: `Catalog().dataset("zgyp6TwCrnjhXfww0000").to_sdata()`


<a id="10x-xenium-kidney-qe9o7bvorvqtceg00000"></a>
## Human kidney

- uid: `qe9O7bVorvQTCEg00000`
- Page: /datasets/10x-xenium-kidney-qe9o7bvorvqtceg00000/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Condition: anti-neutrophil cytoplasmic antibody-associated vasculitis
- Modality: RNA
- Observations (cells): 44,598
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306852
- Publication: https://doi.org/10.1016/j.celrep.2026.117483
- Load: `Catalog().dataset("qe9O7bVorvQTCEg00000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-v72zow9rqeuqa8zv0000"></a>
## Human brain

- uid: `V72zOW9RQEUqA8ZV0000`
- Page: /datasets/visium-spatial-gene-expression-brain-v72zow9rqeuqa8zv0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 2,045
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9497630
- Collections: [geo-gse318562](/collections/md/3.md#geo-gse318562)
- Load: `Catalog().dataset("V72zOW9RQEUqA8ZV0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-tthfrf4xsrvswrip0000"></a>
## Mouse brain

- uid: `tThfrF4xSRvswRip0000`
- Page: /datasets/visium-spatial-gene-expression-brain-tthfrf4xsrvswrip0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,493
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("tThfrF4xSRvswRip0000").to_sdata()`


<a id="10x-xenium-skin-of-body-cfnj37wyfptzulur0000"></a>
## Mouse skin of body

- uid: `cfNj37WYFPTzUluR0000`
- Page: /datasets/10x-xenium-skin-of-body-cfnj37wyfptzulur0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (cells): 93,717
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319706
- Load: `Catalog().dataset("cfNj37WYFPTzUluR0000").to_sdata()`


<a id="10x-xenium-lung-hkgnvzklquts6rvx0000"></a>
## Human lung

- uid: `hKgnvZkLqUts6RVx0000`
- Page: /datasets/10x-xenium-lung-hkgnvzklquts6rvx0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: small cell lung carcinoma
- Modality: RNA
- Observations (cells): 396,008
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE343063
- Load: `Catalog().dataset("hKgnvZkLqUts6RVx0000").to_sdata()`


<a id="10x-xenium-pleura-ovdijmtnjwp6ieaj0000"></a>
## Human pleura

- uid: `oVDijmTNJwp6IeaJ0000`
- Page: /datasets/10x-xenium-pleura-ovdijmtnjwp6ieaj0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: pleura
- Condition: pleural mesothelioma
- Modality: RNA
- Observations (cells): 48,293
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327347
- Publication: https://doi.org/10.1016/j.jtho.2025.11.019
- Load: `Catalog().dataset("oVDijmTNJwp6IeaJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-ahgyb736ejlv3pww0001"></a>
## Mouse spinal cord

- uid: `ahGyb736ejLV3pwW0001`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-ahgyb736ejlv3pww0001/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Condition: spinal cord injury
- Modality: RNA
- Observations (spots): 1,304
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE256397
- Publication: https://doi.org/10.1016/j.devcel.2024.06.016
- Collections: [geo-gse256397](/collections/md/3.md#geo-gse256397)
- Load: `Catalog().dataset("ahGyb736ejLV3pwW0001").to_sdata()`


<a id="visium-spatial-gene-expression-lung-nz1ealeknietsc050000"></a>
## Mouse lung

- uid: `nz1ealEKNIetSc050000`
- Page: /datasets/visium-spatial-gene-expression-lung-nz1ealeknietsc050000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: lung cancer
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295967
- Collections: [geo-gse295967](/collections/md/1.md#geo-gse295967)
- Load: `Catalog().dataset("nz1ealEKNIetSc050000").to_sdata()`


<a id="mibi-tof-breast-aqafyzxngbrgb9jd0000"></a>
## Human breast

- uid: `AQafyzXNGBRGB9jd0000`
- Page: /datasets/mibi-tof-breast-aqafyzxngbrgb9jd0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,225
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("AQafyzXNGBRGB9jd0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-placenta-brzlyf5gkbgytddi0000"></a>
## Human placenta

- uid: `bRZlYf5GkbgYTDdi0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-placenta-brzlyf5gkbgytddi0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: placenta
- Modality: Metabolomics
- Observations: 111,360
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2026-05-01_05h56m21s
- Load: `Catalog().dataset("bRZlYf5GkbgYTDdi0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-7xk5rywbziqtowjw0000"></a>
## Human kidney

- uid: `7XK5RYWbziQtowjw0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-7xk5rywbziqtowjw0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 51,554
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-11-07_03h03m40s
- Load: `Catalog().dataset("7XK5RYWbziQtowjw0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-71lzsrlsomeeawqn0000"></a>
## Human skin of body

- uid: `71lzSrlSomeeAwqn0000`
- Page: /datasets/vizgen-merscope-skin-of-body-71lzsrlsomeeawqn0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 8,381
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("71lzSrlSomeeAwqn0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-placenta-fawy5ytwuupcjgku0000"></a>
## Human placenta

- uid: `faWy5ytWuupCjgkU0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-placenta-fawy5ytwuupcjgku0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: placenta
- Modality: Metabolomics
- Observations: 135,888
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2026-05-05_00h04m49s
- Load: `Catalog().dataset("faWy5ytWuupCjgkU0000").to_sdata()`


<a id="mibi-tof-breast-r3hmgltr7qdowpa40000"></a>
## Human breast

- uid: `R3HmGLTR7QdOwpA40000`
- Page: /datasets/mibi-tof-breast-r3hmgltr7qdowpa40000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,862
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("R3HmGLTR7QdOwpA40000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-7vtlsxu44m1fqhg90000"></a>
## Human lymph node

- uid: `7vTlSxu44M1FqhG90000`
- Page: /datasets/phenocycler-fusion-lymph-node-7vtlsxu44m1fqhg90000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: Burkitt lymphoma
- Modality: protein
- Observations (cells): 14,549
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("7vTlSxu44M1FqhG90000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-hvc6s4tel8jxw2a00000"></a>
## Human middle temporal gyrus

- uid: `HVC6S4TeL8Jxw2a00000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-hvc6s4tel8jxw2a00000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 9,767
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("HVC6S4TeL8Jxw2a00000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-liver-slvkfm5vt7xosvpg0000"></a>
## Mouse liver

- uid: `SlvKFm5VT7xOsVPG0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-liver-slvkfm5vt7xosvpg0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: liver
- Modality: Metabolomics
- Observations: 10,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-04-14_15h07m57s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("SlvKFm5VT7xOsVPG0000").to_sdata()`