# SpatialData-DB datasets, shard d1

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-zone-of-skin-ihukryvvhfcuojw20000"></a>
## Human zone of skin

- uid: `iHukRyVvhfcUojw20000`
- Page: /datasets/visium-spatial-gene-expression-zone-of-skin-ihukryvvhfcuojw20000/
- Technology: Visium
- Organism: human
- Tissue: zone of skin
- Condition: systemic sclerosis
- Modality: RNA
- Observations (spots): 4,890
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312129
- Publication: https://doi.org/10.1172/jci.insight.198954
- Collections: [geo-gse312129](/collections/md/a.md#geo-gse312129)
- Load: `Catalog().dataset("iHukRyVvhfcUojw20000").to_sdata()`


<a id="visium-spatial-gene-expression-eye-g7i8mssryuhfhxnk0000"></a>
## Human eye

- uid: `g7I8MSsRyUhfHXNk0000`
- Page: /datasets/visium-spatial-gene-expression-eye-g7i8mssryuhfhxnk0000/
- Technology: Visium
- Organism: human
- Tissue: eye
- Condition: wet macular degeneration
- Modality: RNA
- Observations (spots): 721
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10312719/
- Publication: https://doi.org/10.1101/2023.06.16.544770
- Collections: [doi-10-1101-2023-06-16-544770](/collections/md/3.md#doi-10-1101-2023-06-16-544770)
- Load: `Catalog().dataset("g7I8MSsRyUhfHXNk0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-p7j7jj0rdprbohmz0000"></a>
## Human kidney

- uid: `p7J7jj0rdPrbohmZ0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-p7j7jj0rdprbohmz0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: diabetic kidney disease
- Modality: RNA
- Observations (spots): 673
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10356613/
- Publication: https://doi.org/10.1038/s41586-023-05769-3
- Collections: [doi-10-1038-s41586-023-05769-3](/collections/md/e.md#doi-10-1038-s41586-023-05769-3)
- Load: `Catalog().dataset("p7J7jj0rdPrbohmZ0000").to_sdata()`


<a id="visium-hd-brain-modwllfdgqab1kdg0000"></a>
## Mouse brain

- uid: `MoDWLLFDgqAB1KDG0000`
- Page: /datasets/visium-hd-brain-modwllfdgqab1kdg0000/
- Technology: Visium HD
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (bins): 384,475
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9817885
- Publication: https://doi.org/10.1038/s44161-026-00844-0
- Collections: [geo-gse335702](/collections/md/0.md#geo-gse335702)
- Load: `Catalog().dataset("MoDWLLFDgqAB1KDG0000").to_sdata()`


<a id="visium-spatial-gene-expression-craniocervical-region-kdztowevfnswh79o0000"></a>
## Human craniocervical region

- uid: `KDzTowEVFnswH79O0000`
- Page: /datasets/visium-spatial-gene-expression-craniocervical-region-kdztowevfnswh79o0000/
- Technology: Visium
- Organism: human
- Tissue: craniocervical region
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (spots): 1,726
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE181300
- Publication: https://doi.org/10.1136/jitc-2022-004832
- Collections: [geo-gse181300](/collections/md/4.md#geo-gse181300)
- Load: `Catalog().dataset("KDzTowEVFnswH79O0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-rxfw8czhehheaaqt0000"></a>
## Human liver

- uid: `rxfw8CZHEHhEAAqT0000`
- Page: /datasets/visium-spatial-gene-expression-liver-rxfw8czhehheaaqt0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: biliary atresia
- Modality: RNA
- Observations (spots): 1,265
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE338525
- Publication: https://doi.org/10.1097/HC9.0000000000000992
- Collections: [geo-gse338525](/collections/md/1.md#geo-gse338525)
- Load: `Catalog().dataset("rxfw8CZHEHhEAAqT0000").to_sdata()`


<a id="visium-spatial-gene-expression-mucosa-bg5kfwharyetfmya0000"></a>
## Human mucosa

- uid: `bg5KfwhARyEtFMya0000`
- Page: /datasets/visium-spatial-gene-expression-mucosa-bg5kfwharyetfmya0000/
- Technology: Visium
- Organism: human
- Tissue: mucosa
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268014
- Publication: https://doi.org/10.1038/s41588-026-02723-7
- Collections: [geo-gse268014](/collections/md/a.md#geo-gse268014)
- Load: `Catalog().dataset("bg5KfwhARyEtFMya0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-adrbkz9lsemvhy9g0000"></a>
## Mouse skin of body

- uid: `aDRbKz9LseMvHy9G0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-adrbkz9lsemvhy9g0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245582
- Publication: https://doi.org/10.1158/0008-5472.CAN-24-0690
- Collections: [geo-gse245582](/collections/md/8.md#geo-gse245582)
- Load: `Catalog().dataset("aDRbKz9LseMvHy9G0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-psimvgo8htpsltwf0000"></a>
## Human pancreas

- uid: `PSimVgO8HTpsLtWf0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-psimvgo8htpsltwf0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 4,724
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327056
- Publication: https://doi.org/10.3389/fonc.2026.1852367
- Collections: [geo-gse327056](/collections/md/a.md#geo-gse327056)
- Load: `Catalog().dataset("PSimVgO8HTpsLtWf0000").to_sdata()`


<a id="visium-spatial-gene-expression-oropharynx-acf3tsjfsw4pl1xv0000"></a>
## Human oropharynx

- uid: `acf3TsJfSW4PL1xV0000`
- Page: /datasets/visium-spatial-gene-expression-oropharynx-acf3tsjfsw4pl1xv0000/
- Technology: Visium
- Organism: human
- Tissue: oropharynx
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (spots): 2,948
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301720
- Publication: https://doi.org/10.1158/1078-0432.CCR-25-2300
- Collections: [geo-gse301720](/collections/md/5.md#geo-gse301720)
- Load: `Catalog().dataset("acf3TsJfSW4PL1xV0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ril7bqcjil5tbtin0000"></a>
## Human brain

- uid: `riL7BQCjiL5tbtin0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ril7bqcjil5tbtin0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (spots): 4,499
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341225
- Collections: [geo-gse341225](/collections/md/d.md#geo-gse341225)
- Load: `Catalog().dataset("riL7BQCjiL5tbtin0000").to_sdata()`


<a id="10x-xenium-multicellular-organism-dil9sbz9ubwcl6n30001"></a>
## Mouse multicellular organism

- uid: `DIl9SBZ9Ubwcl6N30001`
- Page: /datasets/10x-xenium-multicellular-organism-dil9sbz9ubwcl6n30001/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: multicellular organism
- Modality: RNA
- Observations (cells): 1,355,849
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/mouse-pup-preview-data-xenium-mouse-tissue-atlassing-panel-1-standard
- Load: `Catalog().dataset("DIl9SBZ9Ubwcl6N30001").to_sdata()`


<a id="10x-xenium-synovial-membrane-of-synovial-joint-qlbehk7rriuvlvcu0000"></a>
## Human synovial membrane of synovial joint

- uid: `qlbEHk7rrIUvlVCU0000`
- Page: /datasets/10x-xenium-synovial-membrane-of-synovial-joint-qlbehk7rriuvlvcu0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: synovial membrane of synovial joint
- Condition: rheumatoid factor-negative juvenile idiopathic arthritis
- Modality: RNA
- Observations (cells): 131,542
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326837
- Publication: https://doi.org/10.1172/jci.insight.198074
- Load: `Catalog().dataset("qlbEHk7rrIUvlVCU0000").to_sdata()`


<a id="10x-xenium-pancreas-g220cgly4izmcjrr0000"></a>
## Human pancreas

- uid: `G220CGly4IzmCJrR0000`
- Page: /datasets/10x-xenium-pancreas-g220cgly4izmcjrr0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (cells): 77,695
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293800
- Publication: https://doi.org/10.1016/j.cell.2026.03.002
- Load: `Catalog().dataset("G220CGly4IzmCJrR0000").to_sdata()`


<a id="10x-xenium-pancreas-ilea4ms6c9s1ovbg0005"></a>
## Human pancreas

- uid: `IlEA4ms6c9S1OvBg0005`
- Page: /datasets/10x-xenium-pancreas-ilea4ms6c9s1ovbg0005/
- Technology: 10x Xenium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic cancer
- Modality: RNA
- Observations (cells): 140,702
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/ffpe-human-pancreas-with-xenium-multimodal-cell-segmentation-1-standard
- Collections: [10x-ffpe-human-pancreas-with-xenium-multimodal-cell-segmentation](/collections/md/4.md#10x-ffpe-human-pancreas-with-xenium-multimodal-cell-segmentation)
- Load: `Catalog().dataset("IlEA4ms6c9S1OvBg0005").to_sdata()`


<a id="10x-xenium-colon-ojcc9qmt64w5g87p0001"></a>
## Human colon

- uid: `oJcc9qMT64W5g87P0001`
- Page: /datasets/10x-xenium-colon-ojcc9qmt64w5g87p0001/
- Technology: 10x Xenium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (cells): 587,115
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-colon-preview-data-xenium-human-colon-gene-expression-panel-1-standard
- Collections: [10x-human-colon-preview-data-xenium-human-colon-gene-expression-panel-1-standard](/collections/md/2.md#10x-human-colon-preview-data-xenium-human-colon-gene-expression-panel-1-standard)
- Load: `Catalog().dataset("oJcc9qMT64W5g87P0001").to_sdata()`


<a id="visium-spatial-gene-expression-heart-left-ventricle-s0spimismfapunx80000"></a>
## Rat heart left ventricle

- uid: `S0sPiMiSmfApunx80000`
- Page: /datasets/visium-spatial-gene-expression-heart-left-ventricle-s0spimismfapunx80000/
- Technology: Visium
- Organism: rat
- Tissue: heart left ventricle
- Condition: myocardial infarction
- Modality: RNA
- Observations (spots): 4,101
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8169581
- Collections: [geo-gse262430](/collections/md/7.md#geo-gse262430)
- Load: `Catalog().dataset("S0sPiMiSmfApunx80000").to_sdata()`


<a id="10x-xenium-spleen-wc7249d4rrqkn2pp0000"></a>
## Human spleen

- uid: `wc7249d4rRqkN2PP0000`
- Page: /datasets/10x-xenium-spleen-wc7249d4rrqkn2pp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: spleen
- Modality: RNA
- Observations (cells): 220,435
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326743
- Load: `Catalog().dataset("wc7249d4rRqkN2PP0000").to_sdata()`


<a id="visium-spatial-gene-expression-cortex-of-kidney-njwcy2qj4cka18zz0000"></a>
## Human cortex of kidney

- uid: `njWCY2Qj4Cka18ZZ0000`
- Page: /datasets/visium-spatial-gene-expression-cortex-of-kidney-njwcy2qj4cka18zz0000/
- Technology: Visium
- Organism: human
- Tissue: cortex of kidney
- Condition: anti-neutrophil cytoplasmic antibody-associated vasculitis
- Modality: RNA
- Observations (spots): 1,277
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302677
- Publication: https://doi.org/10.3389/fimmu.2026.1884100
- Collections: [geo-gse302677](/collections/md/8.md#geo-gse302677)
- Load: `Catalog().dataset("njWCY2Qj4Cka18ZZ0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-tbclc5z5nkufjcms0000"></a>
## Human colon

- uid: `tBcLc5Z5NkufJCMS0000`
- Page: /datasets/visium-spatial-gene-expression-colon-tbclc5z5nkufjcms0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Condition: colorectal carcinoma
- Modality: RNA
- Observations (spots): 3,909
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334323
- Collections: [geo-gse334323](/collections/md/a.md#geo-gse334323)
- Load: `Catalog().dataset("tBcLc5Z5NkufJCMS0000").to_sdata()`


<a id="10x-xenium-kidney-rwekt4wbzjsqg4yk0001"></a>
## Human kidney

- uid: `RwEKt4wbzJsqG4yK0001`
- Page: /datasets/10x-xenium-kidney-rwekt4wbzjsqg4yk0001/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Modality: RNA
- Observations (cells): 97,560
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-kidney-preview-data-xenium-human-multi-tissue-and-cancer-panel-1-standard
- Collections: [10x-human-kidney-preview-data-xenium-human-multi-tissue-and-cancer-panel-1-standard](/collections/md/1.md#10x-human-kidney-preview-data-xenium-human-multi-tissue-and-cancer-panel-1-standard)
- Load: `Catalog().dataset("RwEKt4wbzJsqG4yK0001").to_sdata()`


<a id="vizgen-merscope-skin-of-body-4cxhopwlkha3bzhi0000"></a>
## Human skin of body

- uid: `4CXhOpwLkha3BZhI0000`
- Page: /datasets/vizgen-merscope-skin-of-body-4cxhopwlkha3bzhi0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 13,170
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("4CXhOpwLkha3BZhI0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-mgskvems3dlzxdlr0000"></a>
## Human kidney

- uid: `mgskVEms3DLZXdLR0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-mgskvems3dlzxdlr0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 7,700
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-04-24_21h01m30s
- Load: `Catalog().dataset("mgskVEms3DLZXdLR0000").to_sdata()`


<a id="10x-xenium-urinary-bladder-72peu7wmr7vtvq980000"></a>
## Human urinary bladder

- uid: `72peU7wMR7VtVq980000`
- Page: /datasets/10x-xenium-urinary-bladder-72peu7wmr7vtvq980000/
- Technology: 10x Xenium
- Organism: human
- Tissue: urinary bladder
- Condition: urinary bladder carcinoma
- Modality: RNA
- Observations (cells): 155,081
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE305629
- Publication: https://doi.org/10.1038/s41467-026-71471-3
- Load: `Catalog().dataset("72peU7wMR7VtVq980000").to_sdata()`


<a id="mibi-tof-breast-bndpvqr4zp2zqbbh0000"></a>
## Human breast

- uid: `bNDpVqr4ZP2zQbBH0000`
- Page: /datasets/mibi-tof-breast-bndpvqr4zp2zqbbh0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,667
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("bNDpVqr4ZP2zQbBH0000").to_sdata()`


<a id="vizgen-merscope-brain-xzwchayvsykljb4h0000"></a>
## Mouse brain

- uid: `XZWCHAyvsYKlJb4h0000`
- Page: /datasets/vizgen-merscope-brain-xzwchayvsykljb4h0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 94,357
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("XZWCHAyvsYKlJb4h0000").to_sdata()`


<a id="stereo-seq-brain-wzc3zqls9p6z0evi0000"></a>
## Mouse brain

- uid: `wZc3zQls9P6Z0EVi0000`
- Page: /datasets/stereo-seq-brain-wzc3zqls9p6z0evi0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations: 62,884
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("wZc3zQls9P6Z0EVi0000").to_sdata()`