# SpatialData-DB datasets, shard cc

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="spatial-transcriptomics-spinal-cord-k7inbnhemamx44lc0000"></a>
## Mouse spinal cord

- uid: `K7INbNHemaMx44LC0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-k7inbnhemamx44lc0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 303
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("K7INbNHemaMx44LC0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-fghswgybzvmjhvse0000"></a>
## Mouse spinal cord

- uid: `FGhSWgYbZVMJHvse0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-fghswgybzvmjhvse0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 161
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("FGhSWgYbZVMJHvse0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-hw8a8syowdxopfgl0000"></a>
## Human prostate gland

- uid: `Hw8A8sYOWdXOPfgL0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-hw8a8syowdxopfgl0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostatic acinar adenocarcinoma
- Modality: RNA
- Observations (spots): 3,092
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05023-2
- Publication: https://doi.org/10.1038/s41586-022-05023-2
- Collections: [doi-10-1038-s41586-022-05023-2](/collections/md/5.md#doi-10-1038-s41586-022-05023-2)
- Load: `Catalog().dataset("Hw8A8sYOWdXOPfgL0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-h0oh9ehlogiu0h2e0000"></a>
## Human prostate gland

- uid: `h0oH9EhLOGiU0H2e0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-h0oh9ehlogiu0h2e0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostatic acinar adenocarcinoma
- Modality: RNA
- Observations (spots): 1,851
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05023-2
- Publication: https://doi.org/10.1038/s41586-022-05023-2
- Collections: [doi-10-1038-s41586-022-05023-2](/collections/md/5.md#doi-10-1038-s41586-022-05023-2)
- Load: `Catalog().dataset("h0oH9EhLOGiU0H2e0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-qqkxdxme9ay0qgmt0000"></a>
## Human breast

- uid: `qQkXdxME9AY0QgMt0000`
- Page: /datasets/visium-spatial-gene-expression-breast-qqkxdxme9ay0qgmt0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 1,199
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE210616
- Publication: https://doi.org/10.1158/0008-5472.CAN-22-2682
- Collections: [geo-gse210616](/collections/md/8.md#geo-gse210616)
- Load: `Catalog().dataset("qQkXdxME9AY0QgMt0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-0gbwebel4ohwtfbm0000"></a>
## Human pancreas

- uid: `0gBwEBel4oHwTfbm0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-0gbwebel4ohwtfbm0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 4,261
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("0gBwEBel4oHwTfbm0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-aywc2lkypfxzt4dr0000"></a>
## Human basal ganglion

- uid: `aYwC2lKYpFXZT4Dr0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-aywc2lkypfxzt4dr0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 49,088
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("aYwC2lKYpFXZT4Dr0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-m9y0jpnqlm6oa8il0000"></a>
## Human lung

- uid: `m9y0jPnqLM6oA8Il0000`
- Page: /datasets/visium-spatial-gene-expression-lung-m9y0jpnqlm6oa8il0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: obsolete idiopathic pulmonary fibrosis
- Modality: RNA
- Observations (spots): 4,653
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE248082
- Publication: https://doi.org/10.1183/13993003.01114-2024
- Collections: [geo-gse248082](/collections/md/3.md#geo-gse248082)
- Load: `Catalog().dataset("m9y0jPnqLM6oA8Il0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-aso5nchbmegnyc3y0000"></a>
## Human breast

- uid: `aso5NchbmegnyC3y0000`
- Page: /datasets/visium-spatial-gene-expression-breast-aso5nchbmegnyc3y0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 1,542
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE210616
- Publication: https://doi.org/10.1158/0008-5472.CAN-22-2682
- Collections: [geo-gse210616](/collections/md/8.md#geo-gse210616)
- Load: `Catalog().dataset("aso5NchbmegnyC3y0000").to_sdata()`


<a id="visium-spatial-gene-expression-amygdala-kyby9efjypczumsq0000"></a>
## Human amygdala

- uid: `kyBy9efjYPCZUmSq0000`
- Page: /datasets/visium-spatial-gene-expression-amygdala-kyby9efjypczumsq0000/
- Technology: Visium
- Organism: human
- Tissue: amygdala
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342709
- Collections: [geo-gse342709](/collections/md/a.md#geo-gse342709)
- Load: `Catalog().dataset("kyBy9efjYPCZUmSq0000").to_sdata()`


<a id="visium-spatial-gene-expression-nasal-cavity-kfpjtmcfvwgrykq70000"></a>
## Human nasal cavity

- uid: `KFPJtmcfvwgrykq70000`
- Page: /datasets/visium-spatial-gene-expression-nasal-cavity-kfpjtmcfvwgrykq70000/
- Technology: Visium
- Organism: human
- Tissue: nasal cavity
- Condition: adenoid cystic carcinoma
- Modality: RNA
- Observations (spots): 3,628
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342687
- Collections: [geo-gse342687](/collections/md/f.md#geo-gse342687)
- Load: `Catalog().dataset("KFPJtmcfvwgrykq70000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-yg1pdcxcppdftg650000"></a>
## Human skin of body

- uid: `YG1pDCxcppdFTg650000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-yg1pdcxcppdftg650000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 2,910
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189292
- Collections: [geo-gse263298](/collections/md/5.md#geo-gse263298)
- Load: `Catalog().dataset("YG1pDCxcppdFTg650000").to_sdata()`


<a id="10x-xenium-subcutaneous-adipose-tissue-woel4peha9iszay90000"></a>
## Human subcutaneous adipose tissue

- uid: `WoeL4PeHa9isZaY90000`
- Page: /datasets/10x-xenium-subcutaneous-adipose-tissue-woel4peha9iszay90000/
- Technology: 10x Xenium
- Organism: human
- Tissue: subcutaneous adipose tissue
- Condition: obesity disorder
- Modality: RNA
- Observations (cells): 7,610
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295862
- Publication: https://doi.org/10.1038/s41586-025-09233-2
- Load: `Catalog().dataset("WoeL4PeHa9isZaY90000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-multicellular-organism-ty2rm0raiorw0lmv0000"></a>
## Mouse multicellular organism

- uid: `tY2rM0Raiorw0lmv0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-multicellular-organism-ty2rm0raiorw0lmv0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: multicellular organism
- Modality: Metabolomics
- Observations: 59,732
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2017-08-11_08h01m02s
- Load: `Catalog().dataset("tY2rM0Raiorw0lmv0000").to_sdata()`


<a id="mibi-tof-lymph-node-4eags7zins9e6r0o0000"></a>
## Human lymph node

- uid: `4EAgs7zINs9E6r0O0000`
- Page: /datasets/mibi-tof-lymph-node-4eags7zins9e6r0o0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,420
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("4EAgs7zINs9E6r0O0000").to_sdata()`


<a id="mibi-tof-lymph-node-efrljiqhki9yhwse0000"></a>
## Human lymph node

- uid: `efrLJIqHki9YHWse0000`
- Page: /datasets/mibi-tof-lymph-node-efrljiqhki9yhwse0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 7,349
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("efrLJIqHki9YHWse0000").to_sdata()`


<a id="10x-xenium-skin-of-body-bs7zbvjus9vkxo2t0000"></a>
## Human skin of body

- uid: `bs7zBvjus9vKXO2t0000`
- Page: /datasets/10x-xenium-skin-of-body-bs7zbvjus9vkxo2t0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: skin of body
- Condition: acne
- Modality: RNA
- Observations (cells): 20,595
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301280
- Load: `Catalog().dataset("bs7zBvjus9vKXO2t0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-wlebjndzyirzl4ba0000"></a>
## Human kidney

- uid: `WLEBjnDZYiRZL4BA0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-wlebjndzyirzl4ba0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 14,807
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-04-10_20h19m57s
- Publication: https://doi.org/10.1681/asn.0000000000000393
- Load: `Catalog().dataset("WLEBjnDZYiRZL4BA0000").to_sdata()`


<a id="mibi-tof-breast-ce0zidfhezyqtouv0000"></a>
## Human breast

- uid: `Ce0zidFHEzYqTouv0000`
- Page: /datasets/mibi-tof-breast-ce0zidfhezyqtouv0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,617
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("Ce0zidFHEzYqTouv0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-wfete1t1idpevi1y0000"></a>
## Human lymph node

- uid: `WfETE1T1IDPeVi1y0000`
- Page: /datasets/phenocycler-fusion-lymph-node-wfete1t1idpevi1y0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: Burkitt lymphoma
- Modality: protein
- Observations (cells): 12,911
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("WfETE1T1IDPeVi1y0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-e0il2xozxsey6tqg0000"></a>
## Human lymph node

- uid: `e0iL2Xozxsey6TQG0000`
- Page: /datasets/phenocycler-fusion-lymph-node-e0il2xozxsey6tqg0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Modality: protein
- Observations (cells): 18,031
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("e0iL2Xozxsey6TQG0000").to_sdata()`


<a id="mibi-tof-unknown-muthw5t9njvtyili0000"></a>
## Human unknown

- uid: `muTHw5T9nJVtyilI0000`
- Page: /datasets/mibi-tof-unknown-muthw5t9njvtyili0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: unknown
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,219
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("muTHw5T9nJVtyilI0000").to_sdata()`