# SpatialData-DB datasets, shard c7

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-descending-colon-mlpwbqbra3mejhhw0000"></a>
## Mouse descending colon

- uid: `MLpWBQbra3mejhhW0000`
- Page: /datasets/visium-spatial-gene-expression-descending-colon-mlpwbqbra3mejhhw0000/
- Technology: Visium
- Organism: mouse
- Tissue: descending colon
- Modality: RNA
- Observations (spots): 640
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE235742
- Publication: https://doi.org/10.1126/scitranslmed.adg5252
- Collections: [geo-gse235742](/collections/md/d.md#geo-gse235742)
- Load: `Catalog().dataset("MLpWBQbra3mejhhW0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-litsgnqovwtccxjw0000"></a>
## Mouse spinal cord

- uid: `lITsGNqOVwTcCxJw0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-litsgnqovwtccxjw0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 287
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("lITsGNqOVwTcCxJw0000").to_sdata()`


<a id="visium-spatial-gene-expression-palatine-tonsil-zfktzjtede7udojm0000"></a>
## Human palatine tonsil

- uid: `ZfkTzJTedE7UdoJm0000`
- Page: /datasets/visium-spatial-gene-expression-palatine-tonsil-zfktzjtede7udojm0000/
- Technology: Visium
- Organism: human
- Tissue: palatine tonsil
- Condition: oropharynx squamous cell carcinoma
- Modality: RNA
- Observations (spots): 4,952
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE289363
- Publication: https://doi.org/10.1186/s12967-026-08082-5
- Collections: [geo-gse289363](/collections/md/a.md#geo-gse289363)
- Load: `Catalog().dataset("ZfkTzJTedE7UdoJm0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-tissue-26q9dnmh98is1i190000"></a>
## Mouse bone tissue

- uid: `26Q9dnmH98Is1I190000`
- Page: /datasets/visium-spatial-gene-expression-bone-tissue-26q9dnmh98is1i190000/
- Technology: Visium
- Organism: mouse
- Tissue: bone tissue
- Modality: RNA
- Observations (spots): 2,935
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE221571
- Publication: https://doi.org/10.1038/s41467-023-36071-5
- Collections: [geo-gse221571](/collections/md/0.md#geo-gse221571)
- Load: `Catalog().dataset("26Q9dnmH98Is1I190000").to_sdata()`


<a id="visium-spatial-gene-expression-cornea-tmtoh70oth6e41eq0001"></a>
## Human cornea

- uid: `TmtOH70OTh6e41eQ0001`
- Page: /datasets/visium-spatial-gene-expression-cornea-tmtoh70oth6e41eq0001/
- Technology: Visium
- Organism: human
- Tissue: cornea
- Condition: keratoconus
- Modality: RNA
- Observations (spots): 1,036
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE303036
- Publication: https://doi.org/10.1167/iovs.67.4.7
- Collections: [geo-gse303036](/collections/md/b.md#geo-gse303036)
- Load: `Catalog().dataset("TmtOH70OTh6e41eQ0001").to_sdata()`


<a id="10x-xenium-pancreas-higbtiqvmwkydmvw0000"></a>
## Human pancreas

- uid: `HigBTiQVMWKyDmVW0000`
- Page: /datasets/10x-xenium-pancreas-higbtiqvmwkydmvw0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic adenocarcinoma
- Modality: RNA
- Observations (cells): 181,033
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9372004
- Publication: https://doi.org/10.1038/s41467-026-68976-2
- Collections: [geo-gse313662](/collections/md/2.md#geo-gse313662)
- Load: `Catalog().dataset("HigBTiQVMWKyDmVW0000").to_sdata()`


<a id="visium-spatial-gene-expression-cerebellum-fzbw8gr9twis35bf0000"></a>
## Mouse cerebellum

- uid: `FZBw8GR9TWIS35bF0000`
- Page: /datasets/visium-spatial-gene-expression-cerebellum-fzbw8gr9twis35bf0000/
- Technology: Visium
- Organism: mouse
- Tissue: cerebellum
- Modality: RNA
- Observations (spots): 3,542
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296375
- Publication: https://doi.org/10.1038/s42003-026-10034-0
- Collections: [geo-gse296375](/collections/md/f.md#geo-gse296375)
- Load: `Catalog().dataset("FZBw8GR9TWIS35bF0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-s8m08qybulycymbb0000"></a>
## Human skin of body

- uid: `S8m08QybULyCymbb0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-s8m08qybulycymbb0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 646
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189298
- Collections: [geo-gse263298](/collections/md/5.md#geo-gse263298)
- Load: `Catalog().dataset("S8m08QybULyCymbb0000").to_sdata()`


<a id="vizgen-merscope-brain-d3kne8czbhlvbxte0000"></a>
## Mouse brain

- uid: `D3kNE8czbHlvBXtE0000`
- Page: /datasets/vizgen-merscope-brain-d3kne8czbhlvbxte0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 13,442
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("D3kNE8czbHlvBXtE0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-negla3rph2eqeeml0000"></a>
## Mouse liver

- uid: `NeGLa3RpH2eqEEMl0000`
- Page: /datasets/visium-spatial-gene-expression-liver-negla3rph2eqeeml0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 2,475
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8810745
- Collections: [geo-gse290324](/collections/md/9.md#geo-gse290324)
- Load: `Catalog().dataset("NeGLa3RpH2eqEEMl0000").to_sdata()`


<a id="10x-xenium-skin-of-body-pblpikfm2hq3qgde0000"></a>
## Human skin of body

- uid: `pBLPikFm2hQ3Qgde0000`
- Page: /datasets/10x-xenium-skin-of-body-pblpikfm2hq3qgde0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: skin of body
- Condition: keloid
- Modality: RNA
- Observations (cells): 86,647
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341250
- Collections: [geo-gse341250](/collections/md/2.md#geo-gse341250)
- Load: `Catalog().dataset("pBLPikFm2hQ3Qgde0000").to_sdata()`


<a id="visium-spatial-gene-expression-cephalic-vein-klovtytuork96p6m0000"></a>
## Dog cephalic vein

- uid: `KlOvtYTuoRK96p6M0000`
- Page: /datasets/visium-spatial-gene-expression-cephalic-vein-klovtytuork96p6m0000/
- Technology: Visium
- Organism: dog
- Tissue: cephalic vein
- Modality: RNA
- Observations (spots): 968
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189151
- Load: `Catalog().dataset("KlOvtYTuoRK96p6M0000").to_sdata()`


<a id="visium-spatial-gene-expression-lymph-node-yo0hw4mnspyq7jo40000"></a>
## Human lymph node

- uid: `Yo0HW4mNspYQ7jo40000`
- Page: /datasets/visium-spatial-gene-expression-lymph-node-yo0hw4mnspyq7jo40000/
- Technology: Visium
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: RNA
- Observations (spots): 13,713
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8855720
- Collections: [geo-gse292299](/collections/md/c.md#geo-gse292299)
- Load: `Catalog().dataset("Yo0HW4mNspYQ7jo40000").to_sdata()`


<a id="visium-spatial-gene-expression-small-intestine-aqngl7uqevw6tm8v0000"></a>
## Human small intestine

- uid: `AQNgl7uQEVW6TM8V0000`
- Page: /datasets/visium-spatial-gene-expression-small-intestine-aqngl7uqevw6tm8v0000/
- Technology: Visium
- Organism: human
- Tissue: small intestine
- Condition: small intestine neuroendocrine neoplasm
- Modality: RNA
- Observations (spots): 972
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301265
- Publication: https://doi.org/10.1158/1078-0432.CCR-25-2854
- Collections: [geo-gse301265](/collections/md/a.md#geo-gse301265)
- Load: `Catalog().dataset("AQNgl7uQEVW6TM8V0000").to_sdata()`


<a id="10x-xenium-bone-marrow-gu7veskw7qhvwvmj0000"></a>
## Human bone marrow

- uid: `Gu7VesKw7QhVwVmJ0000`
- Page: /datasets/10x-xenium-bone-marrow-gu7veskw7qhvwvmj0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: clonal hematopoiesis of indeterminate potential
- Modality: RNA
- Observations (cells): 40,264
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335963
- Load: `Catalog().dataset("Gu7VesKw7QhVwVmJ0000").to_sdata()`


<a id="merfish-brain-qao4calsblcl0zh60000"></a>
## Mouse brain

- uid: `QAo4cAlsBLCl0Zh60000`
- Page: /datasets/merfish-brain-qao4calsblcl0zh60000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 19,003
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("QAo4cAlsBLCl0Zh60000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-g9byatatgtljpbgj0000"></a>
## Macaque basal ganglion

- uid: `G9byaTatgtLJPbGj0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-g9byatatgtljpbgj0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 86,846
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("G9byaTatgtLJPbGj0000").to_sdata()`


<a id="mibi-tof-breast-ioobcg4dxoo7yx3e0000"></a>
## Human breast

- uid: `iooBcG4DxoO7YX3E0000`
- Page: /datasets/mibi-tof-breast-ioobcg4dxoo7yx3e0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,305
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("iooBcG4DxoO7YX3E0000").to_sdata()`


<a id="mibi-tof-breast-3yxbgy4tztaaits10000"></a>
## Human breast

- uid: `3YxBgY4tzTaAITs10000`
- Page: /datasets/mibi-tof-breast-3yxbgy4tztaaits10000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,621
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("3YxBgY4tzTaAITs10000").to_sdata()`


<a id="mibi-tof-brain-uc7q1zlfgqueba5v0000"></a>
## Human brain

- uid: `uc7Q1ZLfGQuEbA5v0000`
- Page: /datasets/mibi-tof-brain-uc7q1zlfgqueba5v0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: protein
- Observations: 3,248
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1579
- Collections: [bia-s-biad1579](/collections/md/2.md#bia-s-biad1579)
- Load: `Catalog().dataset("uc7Q1ZLfGQuEbA5v0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-ze73gwxcrtex81rz0000"></a>
## Human skin of body

- uid: `Ze73gwXCrTex81rz0000`
- Page: /datasets/vizgen-merscope-skin-of-body-ze73gwxcrtex81rz0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 8,772
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("Ze73gwXCrTex81rz0000").to_sdata()`


<a id="mibi-tof-liver-9fv3efteqgd7ry1i0000"></a>
## Human liver

- uid: `9Fv3EFtEQGd7Ry1i0000`
- Page: /datasets/mibi-tof-liver-9fv3efteqgd7ry1i0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: liver
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,818
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("9Fv3EFtEQGd7Ry1i0000").to_sdata()`


<a id="mibi-tof-breast-xvlksd3w4nabmku80000"></a>
## Human breast

- uid: `XvLKSD3W4NAbMkU80000`
- Page: /datasets/mibi-tof-breast-xvlksd3w4nabmku80000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,388
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("XvLKSD3W4NAbMkU80000").to_sdata()`


<a id="mibi-tof-breast-qei1oac5ztsmaauv0000"></a>
## Human breast

- uid: `qeI1OAC5ZtSmaAuv0000`
- Page: /datasets/mibi-tof-breast-qei1oac5ztsmaauv0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,506
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("qeI1OAC5ZtSmaAuv0000").to_sdata()`


<a id="10x-xenium-macula-lutea-hd43axqclgoj59zp0000"></a>
## Human macula lutea

- uid: `Hd43AxqCLgOJ59zp0000`
- Page: /datasets/10x-xenium-macula-lutea-hd43axqclgoj59zp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: macula lutea
- Condition: wet macular degeneration
- Modality: RNA
- Observations (cells): 25,700
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE318037
- Load: `Catalog().dataset("Hd43AxqCLgOJ59zp0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-bw6pxxmbst1prxdz0000"></a>
## Human lymph node

- uid: `Bw6PxXmBst1prxdz0000`
- Page: /datasets/phenocycler-fusion-lymph-node-bw6pxxmbst1prxdz0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: protein
- Observations (cells): 8,837
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("Bw6PxXmBst1prxdz0000").to_sdata()`


<a id="mibi-tof-breast-dermaiobpv1wrsax0000"></a>
## Human breast

- uid: `DErMAIOBpv1wrsAX0000`
- Page: /datasets/mibi-tof-breast-dermaiobpv1wrsax0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,885
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("DErMAIOBpv1wrsAX0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-orw3qc2ih5syqpmr0000"></a>
## Human kidney

- uid: `orW3QC2ih5SyQPmR0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-orw3qc2ih5syqpmr0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 2,322
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-06-15_19h48m32s
- Load: `Catalog().dataset("orW3QC2ih5SyQPmR0000").to_sdata()`


<a id="10x-xenium-pancreas-tl6br1fldmjtkoln0000"></a>
## Mouse pancreas

- uid: `tL6bR1FLdMjTkoLN0000`
- Page: /datasets/10x-xenium-pancreas-tl6br1fldmjtkoln0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (cells): 396,241
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315243
- Publication: https://doi.org/10.1016/j.cell.2026.03.032
- Load: `Catalog().dataset("tL6bR1FLdMjTkoLN0000").to_sdata()`