# SpatialData-DB datasets, shard bf

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-olfactory-bulb-67v03byh1ohzptgc0000"></a>
## Mouse olfactory bulb

- uid: `67V03BYH1oHZPtgc0000`
- Page: /datasets/visium-spatial-gene-expression-olfactory-bulb-67v03byh1ohzptgc0000/
- Technology: Visium
- Organism: mouse
- Tissue: olfactory bulb
- Modality: RNA
- Observations (spots): 1,185
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/adult-mouse-olfactory-bulb-1-standard-1
- Load: `Catalog().dataset("67V03BYH1oHZPtgc0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-oqfhhxyskn9stkpw0000"></a>
## Mouse brain

- uid: `OQFHhxYSkn9stkPW0000`
- Page: /datasets/visium-spatial-gene-expression-brain-oqfhhxyskn9stkpw0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,903
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/adult-mouse-brain-section-1-coronal-stains-dapi-anti-neu-n-1-standard-1-1-0
- Load: `Catalog().dataset("OQFHhxYSkn9stkPW0000").to_sdata()`


<a id="10x-xenium-kidney-kjebenfspzvsxcpa0000"></a>
## Mouse kidney

- uid: `kJebENFSPZVSxcPa0000`
- Page: /datasets/10x-xenium-kidney-kjebenfspzvsxcpa0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: kidney
- Modality: RNA
- Observations (cells): 336,623
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE286051
- Load: `Catalog().dataset("kJebENFSPZVSxcPa0000").to_sdata()`


<a id="spatial-transcriptomics-breast-n9zv1hrj9ybwqheg0000"></a>
## Human breast

- uid: `n9ZV1hRJ9yBwQHEg0000`
- Page: /datasets/spatial-transcriptomics-breast-n9zv1hrj9ybwqheg0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 283
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("n9ZV1hRJ9yBwQHEg0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-enrhuau9mnrsppsr0000"></a>
## Human intestine

- uid: `eNRHuaU9mnrSPPsR0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-enrhuau9mnrsppsr0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: colon adenocarcinoma
- Modality: RNA
- Observations (spots): 3,395
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.cell.com/cell/fulltext/S0092-8674(23)01222-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867423012229%3Fshowall%3Dtrue#secsectitle0020
- Publication: https://doi.org/10.1016/j.cell.2023.11.006
- Collections: [doi-10-1016-j-cell-2023-11-006](/collections/md/1.md#doi-10-1016-j-cell-2023-11-006)
- Load: `Catalog().dataset("eNRHuaU9mnrSPPsR0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-kxw8sqrtabwirw2j0000"></a>
## Human prostate gland

- uid: `kxw8sqrtabWIRW2j0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-kxw8sqrtabwirw2j0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostatic acinar adenocarcinoma
- Modality: RNA
- Observations (spots): 4,079
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05023-2
- Publication: https://doi.org/10.1038/s41586-022-05023-2
- Collections: [doi-10-1038-s41586-022-05023-2](/collections/md/5.md#doi-10-1038-s41586-022-05023-2)
- Load: `Catalog().dataset("kxw8sqrtabWIRW2j0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-pr8orkajdmu2dlgf0000"></a>
## Human liver

- uid: `pR8OrkaJDMU2DlgF0000`
- Page: /datasets/visium-spatial-gene-expression-liver-pr8orkajdmu2dlgf0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 1,489
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281759
- Publication: https://doi.org/10.1016/j.jhepr.2026.101790
- Collections: [geo-gse281759](/collections/md/3.md#geo-gse281759)
- Load: `Catalog().dataset("pR8OrkaJDMU2DlgF0000").to_sdata()`


<a id="vizgen-merscope-liver-74yliu2o9vgpjceu0000"></a>
## Mouse liver

- uid: `74yLIu2o9VgPJceU0000`
- Page: /datasets/vizgen-merscope-liver-74yliu2o9vgpjceu0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (cells): 73,904
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313704
- Collections: [geo-gse313704](/collections/md/9.md#geo-gse313704)
- Load: `Catalog().dataset("74yLIu2o9VgPJceU0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-pas6ca2wl2nuwvjq0000"></a>
## Human basal ganglion

- uid: `PAS6Ca2WL2nUwVJQ0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-pas6ca2wl2nuwvjq0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 49,911
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("PAS6Ca2WL2nUwVJQ0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-kxhqcqjusc038mbb0000"></a>
## Human basal ganglion

- uid: `KxHQCQjuSc038MBb0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-kxhqcqjusc038mbb0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 26,666
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("KxHQCQjuSc038MBb0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-poftahxybhsfu6yp0000"></a>
## Mouse intestine

- uid: `pOFTAhxyBhSfu6YP0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-poftahxybhsfu6yp0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 2,930
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245274
- Publication: https://doi.org/10.1038/s41586-024-08216-z
- Collections: [geo-gse245274](/collections/md/1.md#geo-gse245274)
- Load: `Catalog().dataset("pOFTAhxyBhSfu6YP0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-0fpfb3kkbflq5fnx0000"></a>
## Human pancreas

- uid: `0fpFB3kKbfLq5fNx0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-0fpfb3kkbflq5fnx0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,141
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("0fpFB3kKbfLq5fNx0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-y28hd216cyvs69tc0000"></a>
## Mouse intestine

- uid: `Y28hD216CYvS69TC0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-y28hd216cyvs69tc0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 2,578
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245274
- Publication: https://doi.org/10.1038/s41586-024-08216-z
- Collections: [geo-gse245274](/collections/md/1.md#geo-gse245274)
- Load: `Catalog().dataset("Y28hD216CYvS69TC0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-fuv4mufggcuwi4us0000"></a>
## Human colon

- uid: `FUV4muFggCuWi4US0000`
- Page: /datasets/visium-spatial-gene-expression-colon-fuv4mufggcuwi4us0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Condition: colorectal carcinoma
- Modality: RNA
- Observations (spots): 3,579
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE322553
- Publication: https://doi.org/10.1126/science.ady1678
- Collections: [geo-gse322553](/collections/md/9.md#geo-gse322553)
- Load: `Catalog().dataset("FUV4muFggCuWi4US0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-qmlpjmwswdxw6y9b0000"></a>
## Human pancreas

- uid: `QMLpjMwswdXw6Y9B0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-qmlpjmwswdxw6y9b0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,840
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("QMLpjMwswdXw6Y9B0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-401hlsvdy3r2xfu10000"></a>
## Human liver

- uid: `401HLSVdy3r2xfU10000`
- Page: /datasets/visium-spatial-gene-expression-liver-401hlsvdy3r2xfu10000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatoblastoma
- Modality: RNA
- Observations (spots): 3,726
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283207
- Publication: https://doi.org/10.1016/j.jhep.2025.01.031
- Collections: [geo-gse261958](/collections/md/b.md#geo-gse261958)
- Load: `Catalog().dataset("401HLSVdy3r2xfU10000").to_sdata()`


<a id="visium-spatial-gene-expression-thyroid-gland-pdhztkzcpu6tre330000"></a>
## Human thyroid gland

- uid: `PdHztkZcpu6tRe330000`
- Page: /datasets/visium-spatial-gene-expression-thyroid-gland-pdhztkzcpu6tre330000/
- Technology: Visium
- Organism: human
- Tissue: thyroid gland
- Condition: thyroid gland carcinoma
- Modality: RNA
- Observations (spots): 2,594
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250521
- Collections: [geo-gse250521](/collections/md/5.md#geo-gse250521)
- Load: `Catalog().dataset("PdHztkZcpu6tRe330000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ve6uuzig7xt8yfb20000"></a>
## Mouse brain

- uid: `ve6uUZiG7xT8yFb20000`
- Page: /datasets/visium-spatial-gene-expression-brain-ve6uuzig7xt8yfb20000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,050
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5773460
- Collections: [geo-gse193107](/collections/md/8.md#geo-gse193107)
- Load: `Catalog().dataset("ve6uUZiG7xT8yFb20000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-51blgosgutt5qdlf0000"></a>
## Mouse heart

- uid: `51blgoSguTt5QDlf0000`
- Page: /datasets/visium-spatial-gene-expression-heart-51blgosgutt5qdlf0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Condition: myocardial infarction
- Modality: RNA
- Observations (spots): 2,325
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6613087
- Collections: [geo-gse214611](/collections/md/a.md#geo-gse214611)
- Load: `Catalog().dataset("51blgoSguTt5QDlf0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-pxqwf2h5c1gbtsj10000"></a>
## Human pancreas

- uid: `pxQWF2h5C1gBTsj10000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-pxqwf2h5c1gbtsj10000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 4,483
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327056
- Publication: https://doi.org/10.3389/fonc.2026.1852367
- Collections: [geo-gse327056](/collections/md/a.md#geo-gse327056)
- Load: `Catalog().dataset("pxQWF2h5C1gBTsj10000").to_sdata()`


<a id="10x-xenium-brain-npmsyoqp9k5ldukt0000"></a>
## Mouse brain

- uid: `nPMsYOqp9k5LduKt0000`
- Page: /datasets/10x-xenium-brain-npmsyoqp9k5ldukt0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 111,474
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310599
- Load: `Catalog().dataset("nPMsYOqp9k5LduKt0000").to_sdata()`


<a id="visium-spatial-gene-expression-cheek-7yj4bymmmun4vxvz0000"></a>
## Human cheek

- uid: `7YJ4bYMmmUN4vXvz0000`
- Page: /datasets/visium-spatial-gene-expression-cheek-7yj4bymmmun4vxvz0000/
- Technology: Visium
- Organism: human
- Tissue: cheek
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (spots): 5,247
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8855715
- Collections: [geo-gse292299](/collections/md/c.md#geo-gse292299)
- Load: `Catalog().dataset("7YJ4bYMmmUN4vXvz0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-liver-mrcugklk2pnxn0wc0000"></a>
## Mouse liver

- uid: `mRCuGKLk2Pnxn0WC0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-liver-mrcugklk2pnxn0wc0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: liver
- Modality: Metabolomics
- Observations: 10,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-03-28_11h56m02s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("mRCuGKLk2Pnxn0WC0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-jfxihtuuvtispyxg0000"></a>
## Human skin of body

- uid: `jFXiHtUuVTispYXg0000`
- Page: /datasets/vizgen-merscope-skin-of-body-jfxihtuuvtispyxg0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 8,612
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("jFXiHtUuVTispYXg0000").to_sdata()`


<a id="10x-xenium-lung-cypuqocpmnpsv9ct0000"></a>
## Mouse lung

- uid: `cypUqoCPMNPsv9cT0000`
- Page: /datasets/10x-xenium-lung-cypuqocpmnpsv9ct0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: lung
- Condition: cryptococcosis
- Modality: RNA
- Observations (cells): 203,314
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328931
- Publication: https://doi.org/10.1038/s41467-026-73516-z
- Load: `Catalog().dataset("cypUqoCPMNPsv9cT0000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-ix900ag4fmsfdrao0000"></a>
## Human middle temporal gyrus

- uid: `iX900ag4FMSfDraO0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-ix900ag4fmsfdrao0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Condition: Alzheimer disease
- Modality: RNA
- Observations (cells): 12,786
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("iX900ag4FMSfDraO0000").to_sdata()`


<a id="vizgen-merscope-brain-c6xgv9cgl9ba4tcu0000"></a>
## Mouse brain

- uid: `c6Xgv9cGl9bA4tCU0000`
- Page: /datasets/vizgen-merscope-brain-c6xgv9cgl9ba4tcu0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 8,958
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("c6Xgv9cGl9bA4tCU0000").to_sdata()`


<a id="mibi-tof-lymph-node-20buutubozi7gpfk0000"></a>
## Human lymph node

- uid: `20BuUtuboZI7gpfK0000`
- Page: /datasets/mibi-tof-lymph-node-20buutubozi7gpfk0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,021
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("20BuUtuboZI7gpfK0000").to_sdata()`