# SpatialData-DB datasets, shard b5

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="spatial-transcriptomics-spinal-cord-r0sziyyxvxysuelc0000"></a>
## Mouse spinal cord

- uid: `r0SziyYXvXYsueLc0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-r0sziyyxvxysuelc0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 200
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("r0SziyYXvXYsueLc0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-gxffrtfquqccwz4j0000"></a>
## Mouse spinal cord

- uid: `gxFfrtfQUQccWZ4j0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-gxffrtfquqccwz4j0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 272
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("gxFfrtfQUQccWZ4j0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-54xoexz6g6hfsllw0000"></a>
## Mouse intestine

- uid: `54XOEXZ6G6HfSlLw0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-54xoexz6g6hfsllw0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 2,161
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s44161-022-00138-1
- Publication: https://doi.org/10.1038/s44161-022-00138-1
- Collections: [doi-10-1038-s44161-022-00138-1](/collections/md/1.md#doi-10-1038-s44161-022-00138-1)
- Load: `Catalog().dataset("54XOEXZ6G6HfSlLw0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-lg5wio3fca7kdt8d0000"></a>
## Mouse heart

- uid: `lg5Wio3FCa7KdT8D0000`
- Page: /datasets/visium-spatial-gene-expression-heart-lg5wio3fca7kdt8d0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Condition: ischemia reperfusion injury
- Modality: RNA
- Observations (spots): 2,237
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10203427/
- Publication: https://doi.org/10.3389/fphar.2023.1173649
- Collections: [doi-10-3389-fphar-2023-1173649](/collections/md/3.md#doi-10-3389-fphar-2023-1173649)
- Load: `Catalog().dataset("lg5Wio3FCa7KdT8D0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-5ozmyusd8pq3prkc0000"></a>
## Human heart

- uid: `5OZmYUSd8pQ3PRKC0000`
- Page: /datasets/visium-spatial-gene-expression-heart-5ozmyusd8pq3prkc0000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 2,807
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("5OZmYUSd8pQ3PRKC0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-9qca7dzpwzfwxrx40000"></a>
## Human pancreas

- uid: `9qca7DzPwzfWxrX40000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-9qca7dzpwzfwxrx40000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 4,399
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("9qca7DzPwzfWxrX40000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-g2stfuargstbgnpu0000"></a>
## Mouse intestine

- uid: `g2STFuaRgStbgNPU0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-g2stfuargstbgnpu0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 3,323
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245274
- Publication: https://doi.org/10.1038/s41586-024-08216-z
- Collections: [geo-gse245274](/collections/md/1.md#geo-gse245274)
- Load: `Catalog().dataset("g2STFuaRgStbgNPU0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-egtxpzt57dsjurpk0000"></a>
## Mouse intestine

- uid: `EgTxPZT57dsJurPk0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-egtxpzt57dsjurpk0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 4,639
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245274
- Publication: https://doi.org/10.1038/s41586-024-08216-z
- Collections: [geo-gse245274](/collections/md/1.md#geo-gse245274)
- Load: `Catalog().dataset("EgTxPZT57dsJurPk0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-1e884toec1zbftth0000"></a>
## Mouse skin of body

- uid: `1E884Toec1zBfTth0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-1e884toec1zbftth0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Modality: RNA
- Observations (spots): 557
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278169
- Publication: https://doi.org/10.1016/j.stem.2025.07.010
- Collections: [geo-gse278169](/collections/md/6.md#geo-gse278169)
- Load: `Catalog().dataset("1E884Toec1zBfTth0000").to_sdata()`


<a id="visium-spatial-gene-expression-colorectum-50nmbrnit2dhttpu0000"></a>
## Human colorectum

- uid: `50NMBRnIt2dhttPu0000`
- Page: /datasets/visium-spatial-gene-expression-colorectum-50nmbrnit2dhttpu0000/
- Technology: Visium
- Organism: human
- Tissue: colorectum
- Condition: colorectal carcinoma
- Modality: RNA
- Observations (spots): 3,563
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285505
- Publication: https://doi.org/10.1038/s41467-025-66485-2
- Collections: [geo-gse285505](/collections/md/9.md#geo-gse285505)
- Load: `Catalog().dataset("50NMBRnIt2dhttPu0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-q2i6betenkwagxev0000"></a>
## Mouse brain

- uid: `Q2i6bEtENkWagxEV0000`
- Page: /datasets/visium-spatial-gene-expression-brain-q2i6betenkwagxev0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243140
- Collections: [geo-gse243140](/collections/md/5.md#geo-gse243140)
- Load: `Catalog().dataset("Q2i6bEtENkWagxEV0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-9lydngkeyg1dhoar0000"></a>
## Mouse lung

- uid: `9lyDNgKEyG1DHOAR0000`
- Page: /datasets/visium-spatial-gene-expression-lung-9lydngkeyg1dhoar0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Modality: RNA
- Observations (spots): 2,370
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337537
- Load: `Catalog().dataset("9lyDNgKEyG1DHOAR0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-j98ksdi9odxyowoi0000"></a>
## Human pancreas

- uid: `j98kSDI9odxyowOi0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-j98ksdi9odxyowoi0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,899
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("j98kSDI9odxyowOi0000").to_sdata()`


<a id="visium-spatial-gene-expression-tibialis-anterior-rkxx5fwdvsh0jij80000"></a>
## Mouse tibialis anterior

- uid: `RkxX5FWdvsh0Jij80000`
- Page: /datasets/visium-spatial-gene-expression-tibialis-anterior-rkxx5fwdvsh0jij80000/
- Technology: Visium
- Organism: mouse
- Tissue: tibialis anterior
- Modality: RNA
- Observations (spots): 1,273
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6996259
- Collections: [geo-gse223813](/collections/md/b.md#geo-gse223813)
- Load: `Catalog().dataset("RkxX5FWdvsh0Jij80000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ezydn1onajqrnzpw0000"></a>
## Human brain

- uid: `EZYDn1OnAjQRNzPw0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ezydn1onajqrnzpw0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 3,147
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9497632
- Collections: [geo-gse318562](/collections/md/3.md#geo-gse318562)
- Load: `Catalog().dataset("EZYDn1OnAjQRNzPw0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsal-root-ganglion-bczxujx9f2gbcplh0000"></a>
## Crab-eating macaque dorsal root ganglion

- uid: `BcZxUJx9F2gbcplh0000`
- Page: /datasets/visium-spatial-gene-expression-dorsal-root-ganglion-bczxujx9f2gbcplh0000/
- Technology: Visium
- Organism: crab-eating macaque
- Tissue: dorsal root ganglion
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9369737
- Collections: [geo-gse313530](/collections/md/2.md#geo-gse313530)
- Load: `Catalog().dataset("BcZxUJx9F2gbcplh0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-sxfioruief8su9vb0000"></a>
## Human breast

- uid: `SXFIORuIEf8Su9vB0000`
- Page: /datasets/visium-spatial-gene-expression-breast-sxfioruief8su9vb0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: ductal breast carcinoma in situ
- Modality: RNA
- Observations (spots): 2,510
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE348919
- Collections: [geo-gse348919](/collections/md/4.md#geo-gse348919)
- Load: `Catalog().dataset("SXFIORuIEf8Su9vB0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-et7tcqdarpgnfuvk0000"></a>
## Mouse brain

- uid: `et7tCQDARPgnFuvk0000`
- Page: /datasets/visium-spatial-gene-expression-brain-et7tcqdarpgnfuvk0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,434
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282203
- Publication: https://doi.org/10.64898/2026.01.26.701799
- Collections: [geo-gse282203](/collections/md/3.md#geo-gse282203)
- Load: `Catalog().dataset("et7tCQDARPgnFuvk0000").to_sdata()`


<a id="visium-spatial-gene-expression-ilium-nn2hzjh4k9rpzwrd0000"></a>
## Human ilium

- uid: `Nn2hzjH4K9RPZwRD0000`
- Page: /datasets/visium-spatial-gene-expression-ilium-nn2hzjh4k9rpzwrd0000/
- Technology: Visium
- Organism: human
- Tissue: ilium
- Modality: RNA
- Observations (spots): 1,367
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281317
- Publication: https://doi.org/10.1038/s41586-025-09399-9
- Collections: [geo-gse281317](/collections/md/6.md#geo-gse281317)
- Load: `Catalog().dataset("Nn2hzjH4K9RPZwRD0000").to_sdata()`


<a id="stereo-seq-brain-8ew6nfoy6kn7szho0000"></a>
## Mouse brain

- uid: `8Ew6nfOy6KN7Szho0000`
- Page: /datasets/stereo-seq-brain-8ew6nfoy6kn7szho0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations: 50,824
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("8Ew6nfOy6KN7Szho0000").to_sdata()`


<a id="mibi-tof-breast-avkvt2fyuqpyatgz0000"></a>
## Human breast

- uid: `AVkVt2fyuQpYATgz0000`
- Page: /datasets/mibi-tof-breast-avkvt2fyuqpyatgz0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,027
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("AVkVt2fyuQpYATgz0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-x2ofge5oyptrxwua0000"></a>
## Human kidney

- uid: `x2oFge5oypTRXwUA0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-x2ofge5oyptrxwua0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 33,600
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-04-12_01h09m21s
- Load: `Catalog().dataset("x2oFge5oypTRXwUA0000").to_sdata()`


<a id="10x-xenium-brain-vpbesvg2doveuo0q0000"></a>
## Mouse brain

- uid: `vpBESVg2DoVEUO0q0000`
- Page: /datasets/10x-xenium-brain-vpbesvg2doveuo0q0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Condition: DiGeorge syndrome
- Modality: RNA
- Observations (cells): 195,060
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342913
- Load: `Catalog().dataset("vpBESVg2DoVEUO0q0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-iks9xi2qtyv9njfr0000"></a>
## Human skin of body

- uid: `IKS9Xi2QtyV9njFr0000`
- Page: /datasets/vizgen-merscope-skin-of-body-iks9xi2qtyv9njfr0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 55,990
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("IKS9Xi2QtyV9njFr0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-tdada6ahgno2wnah0000"></a>
## Human lymph node

- uid: `TdAdA6AhgnO2wNaH0000`
- Page: /datasets/phenocycler-fusion-lymph-node-tdada6ahgno2wnah0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Modality: protein
- Observations (cells): 13,644
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("TdAdA6AhgnO2wNaH0000").to_sdata()`


<a id="mibi-tof-breast-ul75qzgwj5yf6eru0000"></a>
## Human breast

- uid: `Ul75qzgWJ5YF6ERu0000`
- Page: /datasets/mibi-tof-breast-ul75qzgwj5yf6eru0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,151
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("Ul75qzgWJ5YF6ERu0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-qrkjgjathpdlwxni0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `qrKjgJAthPdlWXni0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-qrkjgjathpdlwxni0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 48,542
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("qrKjgJAthPdlWXni0000").to_sdata()`


<a id="mibi-tof-breast-aug74chusreisxml0000"></a>
## Human breast

- uid: `auG74CHUsrEIsXMl0000`
- Page: /datasets/mibi-tof-breast-aug74chusreisxml0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,063
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("auG74CHUsrEIsXMl0000").to_sdata()`


<a id="vizgen-merscope-brain-msvjkc5cgmfjxero0000"></a>
## Mouse brain

- uid: `MsvjkC5cGmFJXeRo0000`
- Page: /datasets/vizgen-merscope-brain-msvjkc5cgmfjxero0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 17,664
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("MsvjkC5cGmFJXeRo0000").to_sdata()`