# SpatialData-DB datasets, shard ad

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-zone-of-skin-sgewvoovz66ukd4s0000"></a>
## Human zone of skin

- uid: `SgEwvOOVZ66UKd4S0000`
- Page: /datasets/visium-spatial-gene-expression-zone-of-skin-sgewvoovz66ukd4s0000/
- Technology: Visium
- Organism: human
- Tissue: zone of skin
- Condition: systemic sclerosis
- Modality: RNA
- Observations (spots): 4,899
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312129
- Publication: https://doi.org/10.1172/jci.insight.198954
- Collections: [geo-gse312129](/collections/md/a.md#geo-gse312129)
- Load: `Catalog().dataset("SgEwvOOVZ66UKd4S0000").to_sdata()`


<a id="10x-xenium-uterus-l2zhg70ok6ficgkq0000"></a>
## Mouse uterus

- uid: `L2zHg70oK6ficGKQ0000`
- Page: /datasets/10x-xenium-uterus-l2zhg70ok6ficgkq0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: uterus
- Modality: RNA
- Observations (cells): 139,806
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9457930
- Publication: https://doi.org/10.1073/pnas.2600524123
- Collections: [geo-gse316662](/collections/md/f.md#geo-gse316662)
- Load: `Catalog().dataset("L2zHg70oK6ficGKQ0000").to_sdata()`


<a id="spatial-transcriptomics-brain-wtk4qak42xfqfkqv0000"></a>
## Mouse brain

- uid: `wTK4qAk42XfQfkQV0000`
- Page: /datasets/spatial-transcriptomics-brain-wtk4qak42xfqfkqv0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 262
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/27365449/
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("wTK4qAk42XfQfkQV0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-vsgiak2zhnbtuh9f0000"></a>
## Mouse spinal cord

- uid: `vSgIAk2ZHnBTUH9F0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-vsgiak2zhnbtuh9f0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 197
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("vSgIAk2ZHnBTUH9F0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-8yfazzypw35e7ks30000"></a>
## Human skin of body

- uid: `8YfAZZyPW35E7kS30000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-8yfazzypw35e7ks30000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: atopic eczema
- Modality: RNA
- Observations (spots): 469
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("8YfAZZyPW35E7kS30000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-10aovotl2cnefbxa0000"></a>
## Human breast

- uid: `10aovOtl2CnefbXa0000`
- Page: /datasets/visium-spatial-gene-expression-breast-10aovotl2cnefbxa0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 1,298
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE210616
- Publication: https://doi.org/10.1158/0008-5472.CAN-22-2682
- Collections: [geo-gse210616](/collections/md/8.md#geo-gse210616)
- Load: `Catalog().dataset("10aovOtl2CnefbXa0000").to_sdata()`


<a id="visium-spatial-gene-expression-leptomeninx-5yaxlugt06fzbvqu0000"></a>
## Human leptomeninx

- uid: `5yAXLuGT06fzBvQU0000`
- Page: /datasets/visium-spatial-gene-expression-leptomeninx-5yaxlugt06fzbvqu0000/
- Technology: Visium
- Organism: human
- Tissue: leptomeninx
- Condition: melanoma
- Modality: RNA
- Observations (spots): 3,787
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250636
- Publication: https://doi.org/10.1016/j.xcrm.2024.101606
- Collections: [geo-gse250636](/collections/md/b.md#geo-gse250636)
- Load: `Catalog().dataset("5yAXLuGT06fzBvQU0000").to_sdata()`


<a id="vizgen-merscope-brain-oox0ut1mcmygmlhk0000"></a>
## Mouse brain

- uid: `oOx0Ut1mCMYgmlHK0000`
- Page: /datasets/vizgen-merscope-brain-oox0ut1mcmygmlhk0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 226,657
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE237086
- Load: `Catalog().dataset("oOx0Ut1mCMYgmlHK0000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-iewxf1s6l72vcfm40000"></a>
## Human entorhinal cortex

- uid: `iEwXF1S6l72vCfM40000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-iewxf1s6l72vcfm40000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("iEwXF1S6l72vCfM40000").to_sdata()`


<a id="visium-spatial-gene-expression-hypothalamus-fjtzymyl90sltdeu0000"></a>
## Human hypothalamus

- uid: `FJTzYmYL90SLtdEU0000`
- Page: /datasets/visium-spatial-gene-expression-hypothalamus-fjtzymyl90sltdeu0000/
- Technology: Visium
- Organism: human
- Tissue: hypothalamus
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280316
- Collections: [geo-gse280316](/collections/md/5.md#geo-gse280316)
- Load: `Catalog().dataset("FJTzYmYL90SLtdEU0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-7ykixwq52xwqz2ws0000"></a>
## Mouse breast

- uid: `7ykIxWq52xWqZ2Ws0000`
- Page: /datasets/visium-spatial-gene-expression-breast-7ykixwq52xwqz2ws0000/
- Technology: Visium
- Organism: mouse
- Tissue: breast
- Condition: breast carcinoma
- Modality: RNA
- Observations (spots): 4,371
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299631
- Collections: [geo-gse299631](/collections/md/e.md#geo-gse299631)
- Load: `Catalog().dataset("7ykIxWq52xWqZ2Ws0000").to_sdata()`


<a id="visium-spatial-gene-expression-thymus-ny4n35c87ax4xkxw0000"></a>
## Mouse thymus

- uid: `ny4n35C87ax4xkXW0000`
- Page: /datasets/visium-spatial-gene-expression-thymus-ny4n35c87ax4xkxw0000/
- Technology: Visium
- Organism: mouse
- Tissue: thymus
- Modality: RNA
- Observations (spots): 1,392
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7679868
- Collections: [geo-gse240015](/collections/md/3.md#geo-gse240015)
- Load: `Catalog().dataset("ny4n35C87ax4xkXW0000").to_sdata()`


<a id="10x-xenium-liver-7lkwj12em7bcrvdi0000"></a>
## Mouse liver

- uid: `7LKwj12Em7Bcrvdi0000`
- Page: /datasets/10x-xenium-liver-7lkwj12em7bcrvdi0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (cells): 121,919
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE308969
- Publication: https://doi.org/10.1126/science.adv7129
- Load: `Catalog().dataset("7LKwj12Em7Bcrvdi0000").to_sdata()`


<a id="visium-spatial-gene-expression-artery-t9pwbeinnxsgowue0000"></a>
## Human artery

- uid: `T9pwbeInNxSGoWuE0000`
- Page: /datasets/visium-spatial-gene-expression-artery-t9pwbeinnxsgowue0000/
- Technology: Visium
- Organism: human
- Tissue: artery
- Condition: atherosclerosis
- Modality: RNA
- Observations (spots): 2,470
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274572
- Collections: [geo-gse274572](/collections/md/c.md#geo-gse274572)
- Load: `Catalog().dataset("T9pwbeInNxSGoWuE0000").to_sdata()`


<a id="10x-xenium-skin-of-body-owuscehzxsybdor40000"></a>
## Human skin of body

- uid: `OwUSceHzXsYbDOr40000`
- Page: /datasets/10x-xenium-skin-of-body-owuscehzxsybdor40000/
- Technology: 10x Xenium
- Organism: human
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (cells): 103,598
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE316387
- Load: `Catalog().dataset("OwUSceHzXsYbDOr40000").to_sdata()`


<a id="10x-xenium-bone-marrow-p1uaukdtnyf3kp3b0000"></a>
## Human bone marrow

- uid: `p1UAUKdTNyf3kP3B0000`
- Page: /datasets/10x-xenium-bone-marrow-p1uaukdtnyf3kp3b0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (cells): 34,408
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288340
- Load: `Catalog().dataset("p1UAUKdTNyf3kP3B0000").to_sdata()`


<a id="merfish-brain-wuewmksqbof2pxfc0000"></a>
## Mouse brain

- uid: `WuewMKsQbof2PxfC0000`
- Page: /datasets/merfish-brain-wuewmksqbof2pxfc0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 27,373
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("WuewMKsQbof2PxfC0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-dqbonkp8wa40quwm0000"></a>
## Macaque basal ganglion

- uid: `dQBOnkP8WA40quwM0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-dqbonkp8wa40quwm0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 3,054
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("dQBOnkP8WA40quwM0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-nqca98jzewaxpqzp0000"></a>
## Human kidney

- uid: `NqcA98jzeWAxpQZp0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-nqca98jzewaxpqzp0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 26,048
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-09-22_19h25m08s
- Load: `Catalog().dataset("NqcA98jzeWAxpQZp0000").to_sdata()`


<a id="mibi-tof-breast-9p7y1tgdhryafhef0000"></a>
## Human breast

- uid: `9P7Y1tGdhryafheF0000`
- Page: /datasets/mibi-tof-breast-9p7y1tgdhryafhef0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,942
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("9P7Y1tGdhryafheF0000").to_sdata()`


<a id="mibi-tof-breast-pm62xthjhtdxvgpn0000"></a>
## Human breast

- uid: `pm62XthJHTdXVGPN0000`
- Page: /datasets/mibi-tof-breast-pm62xthjhtdxvgpn0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,836
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("pm62XthJHTdXVGPN0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-5gzumipvyjfhy01v0000"></a>
## Human skin of body

- uid: `5gzuMIpvyJFHY01V0000`
- Page: /datasets/vizgen-merscope-skin-of-body-5gzumipvyjfhy01v0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 3,003
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("5gzuMIpvyJFHY01V0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-2i34fqkn0wxnsn7q0000"></a>
## Human lymph node

- uid: `2i34fqKN0wXNSn7Q0000`
- Page: /datasets/phenocycler-fusion-lymph-node-2i34fqkn0wxnsn7q0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Modality: protein
- Observations (cells): 19,575
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("2i34fqKN0wXNSn7Q0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-brain-sjwziv99ppg2kwsf0000"></a>
## Mouse brain

- uid: `SjwzIv99PpG2kwsF0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-brain-sjwziv99ppg2kwsf0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: brain
- Modality: Metabolomics
- Observations: 32,852
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2025-03-31_10h49m02s
- Load: `Catalog().dataset("SjwzIv99PpG2kwsF0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-f2wtderzpzld4rlg0000"></a>
## Human skin of body

- uid: `f2wTdERzPZlD4RlG0000`
- Page: /datasets/vizgen-merscope-skin-of-body-f2wtderzpzld4rlg0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,595
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("f2wTdERzPZlD4RlG0000").to_sdata()`


<a id="10x-xenium-sigmoid-colon-vbgmkqviqc3su5ed0000"></a>
## Human sigmoid colon

- uid: `VBgMkqvIqc3sU5ED0000`
- Page: /datasets/10x-xenium-sigmoid-colon-vbgmkqviqc3su5ed0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: sigmoid colon
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 24,201
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("VBgMkqvIqc3sU5ED0000").to_sdata()`


<a id="10x-xenium-middle-temporal-gyrus-dcgzfvqnu60qzfvq0000"></a>
## Human middle temporal gyrus

- uid: `dCGzFvQnU60qZFvq0000`
- Page: /datasets/10x-xenium-middle-temporal-gyrus-dcgzfvqnu60qzfvq0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 197,723
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335898
- Publication: https://doi.org/10.1016/j.cell.2026.07.007
- Load: `Catalog().dataset("dCGzFvQnU60qZFvq0000").to_sdata()`


<a id="10x-xenium-submandibular-gland-2zkuncg6ddh4w4hs0000"></a>
## Mouse submandibular gland

- uid: `2ZKunCg6ddH4W4hs0000`
- Page: /datasets/10x-xenium-submandibular-gland-2zkuncg6ddh4w4hs0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: submandibular gland
- Modality: RNA
- Observations (cells): 363,456
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314531
- Publication: https://doi.org/10.1016/j.isci.2026.117494
- Load: `Catalog().dataset("2ZKunCg6ddH4W4hs0000").to_sdata()`


<a id="10x-xenium-pancreas-f7fjgufmjo88ueai0000"></a>
## Mouse pancreas

- uid: `f7fJGuFmJo88UeAi0000`
- Page: /datasets/10x-xenium-pancreas-f7fjgufmjo88ueai0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (cells): 1,234,164
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315243
- Publication: https://doi.org/10.1016/j.cell.2026.03.032
- Load: `Catalog().dataset("f7fJGuFmJo88UeAi0000").to_sdata()`