# SpatialData-DB datasets, shard a9

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-palatine-tonsil-3ryorrsp7zmx56h90000"></a>
## Human palatine tonsil

- uid: `3RYoRrsp7Zmx56H90000`
- Page: /datasets/visium-spatial-gene-expression-palatine-tonsil-3ryorrsp7zmx56h90000/
- Technology: Visium
- Organism: human
- Tissue: palatine tonsil
- Modality: RNA
- Observations (spots): 4,194
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/gene-protein-expression-library-of-human-tonsil-cytassist-ffpe-2-standard
- Load: `Catalog().dataset("3RYoRrsp7Zmx56H90000").to_sdata()`


<a id="visium-spatial-gene-expression-infrapatellar-fat-pad-bxl4j55dkjytlhpj0000"></a>
## Human infrapatellar fat pad

- uid: `bxL4j55dKJyTLhpJ0000`
- Page: /datasets/visium-spatial-gene-expression-infrapatellar-fat-pad-bxl4j55dkjytlhpj0000/
- Technology: Visium
- Organism: human
- Tissue: infrapatellar fat pad
- Condition: osteoarthritis, knee
- Modality: RNA
- Observations (spots): 2,200
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE253199
- Publication: https://doi.org/10.1136/ard-2024-225928
- Collections: [geo-gse253199](/collections/md/9.md#geo-gse253199)
- Load: `Catalog().dataset("bxL4j55dKJyTLhpJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-3lrepyldaf0nvpej0000"></a>
## Mouse colon

- uid: `3lrePYlDAF0nvPeJ0000`
- Page: /datasets/visium-spatial-gene-expression-colon-3lrepyldaf0nvpej0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Modality: RNA
- Observations (spots): 2,604
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE169749
- Publication: https://doi.org/10.1038/s41467-022-28497-0
- Collections: [geo-gse169749](/collections/md/5.md#geo-gse169749)
- Load: `Catalog().dataset("3lrePYlDAF0nvPeJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-iezsazxbxn3cgs7f0000"></a>
## Human kidney

- uid: `iEzsAzXBxN3cgS7F0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-iezsazxbxn3cgs7f0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: clear cell renal carcinoma
- Modality: RNA
- Observations (spots): 4,359
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/35231421/
- Publication: https://doi.org/10.1016/j.immuni.2022.02.001
- Collections: [doi-10-1016-j-immuni-2022-02-001](/collections/md/d.md#doi-10-1016-j-immuni-2022-02-001)
- Load: `Catalog().dataset("iEzsAzXBxN3cgS7F0000").to_sdata()`


<a id="visium-spatial-gene-expression-lymphoid-tissue-k4yqpmlbbiwz8uig0000"></a>
## Human lymphoid tissue

- uid: `K4YqPmlBbIWZ8uiG0000`
- Page: /datasets/visium-spatial-gene-expression-lymphoid-tissue-k4yqpmlbbiwz8uig0000/
- Technology: Visium
- Organism: human
- Tissue: lymphoid tissue
- Condition: non-Hodgkin lymphoma
- Modality: RNA
- Observations (spots): 3,687
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274051
- Publication: https://doi.org/10.1101/2025.10.15.682084
- Collections: [geo-gse274051](/collections/md/9.md#geo-gse274051)
- Load: `Catalog().dataset("K4YqPmlBbIWZ8uiG0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-n5cwmqqscod1oh9t0000"></a>
## Human lung

- uid: `N5CwmqqScod1OH9T0000`
- Page: /datasets/visium-spatial-gene-expression-lung-n5cwmqqscod1oh9t0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: lung adenocarcinoma
- Modality: RNA
- Observations (spots): 1,915
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273378
- Publication: https://doi.org/10.1038/s41467-026-70600-2
- Collections: [geo-gse273378](/collections/md/2.md#geo-gse273378)
- Load: `Catalog().dataset("N5CwmqqScod1OH9T0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-1k46b540ncwx7uwd0000"></a>
## Human lung

- uid: `1k46B540Ncwx7UWd0000`
- Page: /datasets/visium-spatial-gene-expression-lung-1k46b540ncwx7uwd0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: lung adenocarcinoma
- Modality: RNA
- Observations (spots): 3,784
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273378
- Publication: https://doi.org/10.1038/s41467-026-70600-2
- Collections: [geo-gse273378](/collections/md/2.md#geo-gse273378)
- Load: `Catalog().dataset("1k46B540Ncwx7UWd0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-low4bllewvqk6w9x0000"></a>
## Mouse brain

- uid: `lOW4BLlEWVQk6w9x0000`
- Page: /datasets/visium-spatial-gene-expression-brain-low4bllewvqk6w9x0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 2,345
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313407
- Publication: https://doi.org/10.1177/08977151251390528
- Collections: [geo-gse313407](/collections/md/3.md#geo-gse313407)
- Load: `Catalog().dataset("lOW4BLlEWVQk6w9x0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-oeqntngtdyanvg2i0000"></a>
## Mouse liver

- uid: `oeqNTnGTDyanVg2I0000`
- Page: /datasets/visium-spatial-gene-expression-liver-oeqntngtdyanvg2i0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: alcoholic liver diseases
- Modality: RNA
- Observations (spots): 1,813
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320442
- Collections: [geo-gse320442](/collections/md/7.md#geo-gse320442)
- Load: `Catalog().dataset("oeqNTnGTDyanVg2I0000").to_sdata()`


<a id="mibi-tof-breast-bm04tnb7b94ux5db0000"></a>
## Human breast

- uid: `Bm04TNb7b94Ux5dB0000`
- Page: /datasets/mibi-tof-breast-bm04tnb7b94ux5db0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,781
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("Bm04TNb7b94Ux5dB0000").to_sdata()`


<a id="10x-xenium-uterus-2x1ynbstgsnc8yyo0000"></a>
## Mouse uterus

- uid: `2x1YnBSTgsNc8YYo0000`
- Page: /datasets/10x-xenium-uterus-2x1ynbstgsnc8yyo0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: uterus
- Modality: RNA
- Observations (cells): 214,768
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9457932
- Publication: https://doi.org/10.1073/pnas.2600524123
- Collections: [geo-gse316662](/collections/md/f.md#geo-gse316662)
- Load: `Catalog().dataset("2x1YnBSTgsNc8YYo0000").to_sdata()`


<a id="visium-spatial-gene-expression-plantaris-ofirgkjmozwnfb7s0000"></a>
## Mouse plantaris

- uid: `OFiRGkjMoZWnfb7s0000`
- Page: /datasets/visium-spatial-gene-expression-plantaris-ofirgkjmozwnfb7s0000/
- Technology: Visium
- Organism: mouse
- Tissue: plantaris
- Modality: RNA
- Observations (spots): 1,169
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE294765
- Publication: https://doi.org/10.1016/j.devcel.2026.03.010
- Collections: [geo-gse294765](/collections/md/7.md#geo-gse294765)
- Load: `Catalog().dataset("OFiRGkjMoZWnfb7s0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-lrczydf2x1pou7yg0000"></a>
## Human prostate gland

- uid: `LrcZYDf2x1POu7YG0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-lrczydf2x1pou7yg0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 1,818
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("LrcZYDf2x1POu7YG0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-npge43djnhowdqqb0000"></a>
## Mouse brain

- uid: `npGe43DjnHOwdQqb0000`
- Page: /datasets/visium-spatial-gene-expression-brain-npge43djnhowdqqb0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 2,635
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313407
- Publication: https://doi.org/10.1177/08977151251390528
- Collections: [geo-gse313407](/collections/md/3.md#geo-gse313407)
- Load: `Catalog().dataset("npGe43DjnHOwdQqb0000").to_sdata()`


<a id="visium-spatial-gene-expression-white-matter-w0kwfnxxsu0pbqeg0000"></a>
## Human white matter

- uid: `W0kWfNxXSu0pBQeG0000`
- Page: /datasets/visium-spatial-gene-expression-white-matter-w0kwfnxxsu0pbqeg0000/
- Technology: Visium
- Organism: human
- Tissue: white matter
- Modality: RNA
- Observations (spots): 3,550
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6368797
- Collections: [geo-gse208747](/collections/md/d.md#geo-gse208747)
- Load: `Catalog().dataset("W0kWfNxXSu0pBQeG0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-4svppqskkrn36i4p0000"></a>
## Mouse brain

- uid: `4svPpqSkkrN36i4P0000`
- Page: /datasets/visium-spatial-gene-expression-brain-4svppqskkrn36i4p0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,400
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5773455
- Collections: [geo-gse193107](/collections/md/8.md#geo-gse193107)
- Load: `Catalog().dataset("4svPpqSkkrN36i4P0000").to_sdata()`


<a id="visium-spatial-gene-expression-perianal-skin-cu6uavq2qqdx8cxz0000"></a>
## Human perianal skin

- uid: `Cu6uaVQ2QqDx8CXz0000`
- Page: /datasets/visium-spatial-gene-expression-perianal-skin-cu6uavq2qqdx8cxz0000/
- Technology: Visium
- Organism: human
- Tissue: perianal skin
- Condition: anal fistula
- Modality: RNA
- Observations (spots): 2,076
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8521496
- Collections: [geo-gse277387](/collections/md/8.md#geo-gse277387)
- Load: `Catalog().dataset("Cu6uaVQ2QqDx8CXz0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-0f9p95ophhzt5zu30000"></a>
## Mouse heart

- uid: `0F9P95OPhhZt5Zu30000`
- Page: /datasets/visium-spatial-gene-expression-heart-0f9p95ophhzt5zu30000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Condition: myocardial infarction
- Modality: RNA
- Observations (spots): 2,251
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6613084
- Collections: [geo-gse214611](/collections/md/a.md#geo-gse214611)
- Load: `Catalog().dataset("0F9P95OPhhZt5Zu30000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-jwf3fnbcbwpkqsqg0000"></a>
## Human lung

- uid: `JWf3fNBcBwpkqsQG0000`
- Page: /datasets/visium-spatial-gene-expression-lung-jwf3fnbcbwpkqsqg0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 838
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310610
- Publication: https://doi.org/10.1038/s41598-025-34594-z
- Collections: [geo-gse310610](/collections/md/9.md#geo-gse310610)
- Load: `Catalog().dataset("JWf3fNBcBwpkqsQG0000").to_sdata()`


<a id="mibi-tof-breast-ya6t22mumwot3xrg0000"></a>
## Human breast

- uid: `ya6T22MUMWOt3XRg0000`
- Page: /datasets/mibi-tof-breast-ya6t22mumwot3xrg0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,135
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("ya6T22MUMWOt3XRg0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-9d9iodwtzt7ct5sz0000"></a>
## Human kidney

- uid: `9D9ioDwTZt7cT5Sz0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-9d9iodwtzt7ct5sz0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 8,140
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-06-15_19h14m01s
- Load: `Catalog().dataset("9D9ioDwTZt7cT5Sz0000").to_sdata()`


<a id="merfish-brain-yizszv4ptqddwobc0000"></a>
## Mouse brain

- uid: `Yizszv4pTqDdwObc0000`
- Page: /datasets/merfish-brain-yizszv4ptqddwobc0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 24,694
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("Yizszv4pTqDdwObc0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-jstjdyg1sa2oykzg0000"></a>
## Human skin of body

- uid: `JstJdYG1Sa2oYKzG0000`
- Page: /datasets/vizgen-merscope-skin-of-body-jstjdyg1sa2oykzg0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,485
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("JstJdYG1Sa2oYKzG0000").to_sdata()`


<a id="mibi-tof-breast-moxfz2jdahamed7c0000"></a>
## Human breast

- uid: `MOxfz2JdAHamED7C0000`
- Page: /datasets/mibi-tof-breast-moxfz2jdahamed7c0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,792
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("MOxfz2JdAHamED7C0000").to_sdata()`


<a id="mibi-tof-lymph-node-wgyw9g2jgpgfva7c0000"></a>
## Human lymph node

- uid: `WGYW9G2JGpgfVA7C0000`
- Page: /datasets/mibi-tof-lymph-node-wgyw9g2jgpgfva7c0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,652
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("WGYW9G2JGpgfVA7C0000").to_sdata()`