# SpatialData-DB datasets, shard a2

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-breast-uzxwwpo50kem16cw0000"></a>
## Human breast

- uid: `UzxWwpO50keM16Cw0000`
- Page: /datasets/visium-hd-breast-uzxwwpo50kem16cw0000/
- Technology: Visium HD
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (bins): 415,161
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-11mm-human-breast-cancer-tma
- Load: `Catalog().dataset("UzxWwpO50keM16Cw0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-zop81kadhqkd9uip0000"></a>
## Mouse colon

- uid: `Zop81KAdHQKd9UIp0000`
- Page: /datasets/visium-spatial-gene-expression-colon-zop81kadhqkd9uip0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 7,626
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334067
- Publication: https://doi.org/10.1038/s41588-026-02673-0
- Collections: [geo-gse334067](/collections/md/b.md#geo-gse334067)
- Load: `Catalog().dataset("Zop81KAdHQKd9UIp0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-touwxts0qwvrvegl0000"></a>
## Mouse colon

- uid: `tOUWXTs0qwVRvEgL0000`
- Page: /datasets/visium-spatial-gene-expression-colon-touwxts0qwvrvegl0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 2,576
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334067
- Publication: https://doi.org/10.1038/s41588-026-02673-0
- Collections: [geo-gse334067](/collections/md/b.md#geo-gse334067)
- Load: `Catalog().dataset("tOUWXTs0qwVRvEgL0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-d9xbyzog5rdecklx0000"></a>
## Mouse colon

- uid: `d9XbYZOG5rdEcklX0000`
- Page: /datasets/visium-spatial-gene-expression-colon-d9xbyzog5rdecklx0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 4,083
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334067
- Publication: https://doi.org/10.1038/s41588-026-02673-0
- Collections: [geo-gse334067](/collections/md/b.md#geo-gse334067)
- Load: `Catalog().dataset("d9XbYZOG5rdEcklX0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-ewx754a3yuzfdgae0000"></a>
## Human colon

- uid: `Ewx754a3yUZfDGAe0000`
- Page: /datasets/visium-spatial-gene-expression-colon-ewx754a3yuzfdgae0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 14,336
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312204
- Publication: https://doi.org/10.1038/s41467-026-71944-5
- Collections: [geo-gse312204](/collections/md/4.md#geo-gse312204)
- Load: `Catalog().dataset("Ewx754a3yUZfDGAe0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-xlabzigzndcmtoxo0000"></a>
## Rat colon

- uid: `XLaBZiGZNdCmtoxO0000`
- Page: /datasets/visium-spatial-gene-expression-colon-xlabzigzndcmtoxo0000/
- Technology: Visium
- Organism: rat
- Tissue: colon
- Condition: adenocarcinoma
- Modality: RNA
- Observations (spots): 1,124
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE211895
- Publication: https://doi.org/10.1016/j.crmeth.2022.100340
- Collections: [geo-gse211895](/collections/md/d.md#geo-gse211895)
- Load: `Catalog().dataset("XLaBZiGZNdCmtoxO0000").to_sdata()`


<a id="visium-spatial-gene-expression-periosteum-uaxrvibdetrhxhbl0000"></a>
## Mouse periosteum

- uid: `UAxRviBdEtrhXHBL0000`
- Page: /datasets/visium-spatial-gene-expression-periosteum-uaxrvibdetrhxhbl0000/
- Technology: Visium
- Organism: mouse
- Tissue: periosteum
- Condition: bone fracture
- Modality: RNA
- Observations (spots): 7,260
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297119
- Publication: https://doi.org/10.1038/s42003-025-08316-0
- Collections: [geo-gse297119](/collections/md/e.md#geo-gse297119)
- Load: `Catalog().dataset("UAxRviBdEtrhXHBL0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-lbc0r043bbqwp9yd0000"></a>
## Mouse spinal cord

- uid: `lbC0R043bbQWp9yd0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-lbc0r043bbqwp9yd0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 258
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("lbC0R043bbQWp9yd0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-s4esup5dk4gyb1qg0000"></a>
## Mouse spinal cord

- uid: `S4eSup5DK4gyb1QG0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-s4esup5dk4gyb1qg0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 151
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("S4eSup5DK4gyb1QG0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-ikbjfdfne6ytlnyc0000"></a>
## Mouse spinal cord

- uid: `ikbjfdfnE6ytlNYC0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-ikbjfdfne6ytlnyc0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 288
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("ikbjfdfnE6ytlNYC0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-e7g91ooqs2ryvz6i0000"></a>
## Mouse spinal cord

- uid: `E7g91oOQs2Ryvz6I0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-e7g91ooqs2ryvz6i0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 23
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("E7g91oOQs2Ryvz6I0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-9aqd1vwd9z2es8d10000"></a>
## Mouse spinal cord

- uid: `9aqD1vWd9Z2eS8d10000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-9aqd1vwd9z2es8d10000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 268
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("9aqD1vWd9Z2eS8d10000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-ahzjhfhit5xrgs4s0000"></a>
## Mouse heart

- uid: `AHZjhfHIT5xRGS4S0000`
- Page: /datasets/visium-spatial-gene-expression-heart-ahzjhfhit5xrgs4s0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Modality: RNA
- Observations (spots): 2,826
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source:                                             
- Collections: [hest-yap-drives-assembly-of-a-spatially-colocalized-cellular-triad-required-for-heart-renewal](/collections/md/a.md#hest-yap-drives-assembly-of-a-spatially-colocalized-cellular-triad-required-for-heart-renewal)
- Load: `Catalog().dataset("AHZjhfHIT5xRGS4S0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-reqaf84ffpuza6iv0000"></a>
## Human brain

- uid: `ReQaf84fFPuZA6IV0000`
- Page: /datasets/visium-spatial-gene-expression-brain-reqaf84ffpuza6iv0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 3,464
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE237183
- Publication: https://doi.org/10.1016/j.cell.2024.03.029
- Collections: [geo-gse237183](/collections/md/d.md#geo-gse237183)
- Load: `Catalog().dataset("ReQaf84fFPuZA6IV0000").to_sdata()`


<a id="visium-hd-bone-element-xvk6t0rajftgokci0000"></a>
## Human bone element

- uid: `xVK6T0rajFTgOKci0000`
- Page: /datasets/visium-hd-bone-element-xvk6t0rajftgokci0000/
- Technology: Visium HD
- Organism: human
- Tissue: bone element
- Condition: Ewing sarcoma
- Modality: RNA
- Observations (bins): 13,627
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9556004
- Collections: [geo-gse322640](/collections/md/a.md#geo-gse322640)
- Load: `Catalog().dataset("xVK6T0rajFTgOKci0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-irvqjbdaxfd9iqzs0000"></a>
## Mouse pancreas

- uid: `iRVQjBdaXfd9IQZs0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-irvqjbdaxfd9iqzs0000/
- Technology: Visium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (spots): 2,764
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE249121
- Publication: https://doi.org/10.1186/s13073-025-01452-6
- Collections: [geo-gse249121](/collections/md/d.md#geo-gse249121)
- Load: `Catalog().dataset("iRVQjBdaXfd9IQZs0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-fr1r0qahulipfxrt0000"></a>
## Human basal ganglion

- uid: `FR1r0qaHulIpfXrT0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-fr1r0qahulipfxrt0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 90,811
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("FR1r0qaHulIpfXrT0000").to_sdata()`


<a id="visium-spatial-gene-expression-brainstem-s1fjcsibqcble58h0001"></a>
## Rat brainstem

- uid: `S1fJcsIBQcble58H0001`
- Page: /datasets/visium-spatial-gene-expression-brainstem-s1fjcsibqcble58h0001/
- Technology: Visium
- Organism: rat
- Tissue: brainstem
- Modality: RNA
- Observations (spots): 1,792
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260847
- Publication: https://doi.org/10.1016/j.isci.2024.110549
- Collections: [geo-gse260847](/collections/md/4.md#geo-gse260847)
- Load: `Catalog().dataset("S1fJcsIBQcble58H0001").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ughflet5hrkyvhlo0000"></a>
## Mouse brain

- uid: `UgHFLeT5HRkyvhLO0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ughflet5hrkyvhlo0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,651
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE194338
- Load: `Catalog().dataset("UgHFLeT5HRkyvhLO0000").to_sdata()`


<a id="visium-spatial-gene-expression-temporal-cortex-727uumbdhxgcxpkx0000"></a>
## Human temporal cortex

- uid: `727uUMbDHXGCXPkx0000`
- Page: /datasets/visium-spatial-gene-expression-temporal-cortex-727uumbdhxgcxpkx0000/
- Technology: Visium
- Organism: human
- Tissue: temporal cortex
- Condition: Lewy body dementia
- Modality: RNA
- Observations (spots): 11,447
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293896
- Publication: https://doi.org/10.1007/s00401-026-02981-z
- Collections: [geo-gse293896](/collections/md/f.md#geo-gse293896)
- Load: `Catalog().dataset("727uUMbDHXGCXPkx0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-w9k1mbdcnxskw1nn0000"></a>
## Human prostate gland

- uid: `W9k1MbDCNxsKw1NN0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-w9k1mbdcnxskw1nn0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: benign prostatic hyperplasia
- Modality: RNA
- Observations (spots): 2,030
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("W9k1MbDCNxsKw1NN0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-phpfcihgjcljesla0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `PHpfcihgJcLJesLa0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-phpfcihgjcljesla0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: major depressive disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("PHpfcihgJcLJesLa0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-xwe97uxwa8wji0hr0000"></a>
## Human brain

- uid: `xwe97UXwa8wJI0hr0000`
- Page: /datasets/visium-spatial-gene-expression-brain-xwe97uxwa8wji0hr0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: metastatic malignant neoplasm
- Modality: RNA
- Observations (spots): 4,569
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325196
- Collections: [geo-gse325196](/collections/md/2.md#geo-gse325196)
- Load: `Catalog().dataset("xwe97UXwa8wJI0hr0000").to_sdata()`


<a id="10x-xenium-oral-cavity-yxg4wyipg5elcvlv0000"></a>
## Human oral cavity

- uid: `YXG4wYiPg5ELCVLV0000`
- Page: /datasets/10x-xenium-oral-cavity-yxg4wyipg5elcvlv0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: oral cavity
- Condition: ameloblastoma
- Modality: RNA
- Observations (cells): 38,672
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE300147
- Publication: https://doi.org/10.1126/sciimmunol.aec3133
- Load: `Catalog().dataset("YXG4wYiPg5ELCVLV0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-n0uujxnpctn27iol0000"></a>
## Human lung

- uid: `N0UUjxNpctn27iol0000`
- Page: /datasets/visium-spatial-gene-expression-lung-n0uujxnpctn27iol0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 1,873
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452881
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("N0UUjxNpctn27iol0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-nx8xv6cp8fsozhl60000"></a>
## Human liver

- uid: `nx8xV6CP8fsOZHL60000`
- Page: /datasets/visium-spatial-gene-expression-liver-nx8xv6cp8fsozhl60000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,397
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452862
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("nx8xV6CP8fsOZHL60000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-hexmiiiglceuxlzt0000"></a>
## Mouse colon

- uid: `HexMIIiglCeuXLzT0000`
- Page: /datasets/visium-spatial-gene-expression-colon-hexmiiiglceuxlzt0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colorectal cancer
- Modality: RNA
- Observations (spots): 4,344
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7103782
- Collections: [geo-gse227598](/collections/md/2.md#geo-gse227598)
- Load: `Catalog().dataset("HexMIIiglCeuXLzT0000").to_sdata()`


<a id="visium-spatial-gene-expression-amygdala-pfqv9o3vyze9dgzv0000"></a>
## Human amygdala

- uid: `pfqv9o3VYZe9dGZv0000`
- Page: /datasets/visium-spatial-gene-expression-amygdala-pfqv9o3vyze9dgzv0000/
- Technology: Visium
- Organism: human
- Tissue: amygdala
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342709
- Collections: [geo-gse342709](/collections/md/a.md#geo-gse342709)
- Load: `Catalog().dataset("pfqv9o3VYZe9dGZv0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-r6fjt5iuku2bjlp40000"></a>
## Human lung

- uid: `R6fJT5IUku2bjlP40000`
- Page: /datasets/visium-spatial-gene-expression-lung-r6fjt5iuku2bjlp40000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: sarcoidosis
- Modality: RNA
- Observations (spots): 1,859
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE262998
- Collections: [geo-gse262998](/collections/md/a.md#geo-gse262998)
- Load: `Catalog().dataset("R6fJT5IUku2bjlP40000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-ki3j6vpkjavwuppy0000"></a>
## Human lung

- uid: `KI3j6VpkjaVwuPPY0000`
- Page: /datasets/visium-spatial-gene-expression-lung-ki3j6vpkjavwuppy0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (spots): 5,388
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8855707
- Collections: [geo-gse292299](/collections/md/c.md#geo-gse292299)
- Load: `Catalog().dataset("KI3j6VpkjaVwuPPY0000").to_sdata()`


<a id="merfish-brain-q3j58bf2ngpwxrgx0000"></a>
## Mouse brain

- uid: `q3J58Bf2NgPWxRgX0000`
- Page: /datasets/merfish-brain-q3j58bf2ngpwxrgx0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 27,487
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("q3J58Bf2NgPWxRgX0000").to_sdata()`


<a id="vizgen-merscope-brain-qsehv79c64bpuhus0000"></a>
## Mouse brain

- uid: `QSeHv79c64BPuhUs0000`
- Page: /datasets/vizgen-merscope-brain-qsehv79c64bpuhus0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 93,478
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("QSeHv79c64BPuhUs0000").to_sdata()`


<a id="stereo-seq-thymus-rjcett3pv0q2c4dx0000"></a>
## Mouse thymus

- uid: `RJcett3Pv0q2C4Dx0000`
- Page: /datasets/stereo-seq-thymus-rjcett3pv0q2c4dx0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: thymus
- Modality: RNA
- Observations: 17,760
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333479
- Collections: [geo-gse333479](/collections/md/4.md#geo-gse333479)
- Load: `Catalog().dataset("RJcett3Pv0q2C4Dx0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-2sugsrcynepsqh490000"></a>
## Human kidney

- uid: `2SUGsrcYNepSqH490000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-2sugsrcynepsqh490000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 45,816
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-09-05_21h58m55s
- Load: `Catalog().dataset("2SUGsrcYNepSqH490000").to_sdata()`


<a id="vizgen-merscope-brain-mbfja0doqmzj0tnq0000"></a>
## Mouse brain

- uid: `mbFJA0DoQmzj0tNq0000`
- Page: /datasets/vizgen-merscope-brain-mbfja0doqmzj0tnq0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 37,480
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("mbFJA0DoQmzj0tNq0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-mynm3o06hrd3yigf0000"></a>
## Human lymph node

- uid: `mYnm3O06hrD3yiGF0000`
- Page: /datasets/phenocycler-fusion-lymph-node-mynm3o06hrd3yigf0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: protein
- Observations (cells): 13,424
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("mYnm3O06hrD3yiGF0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-1b6vqottqfxoaefw0000"></a>
## Human skin of body

- uid: `1B6vqoTtqFxOaeFw0000`
- Page: /datasets/vizgen-merscope-skin-of-body-1b6vqottqfxoaefw0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,178
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("1B6vqoTtqFxOaeFw0000").to_sdata()`


<a id="mibi-tof-breast-mgzkrf3yuxndhtgz0000"></a>
## Human breast

- uid: `mGZKrF3yUXndhTGz0000`
- Page: /datasets/mibi-tof-breast-mgzkrf3yuxndhtgz0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,488
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("mGZKrF3yUXndhTGz0000").to_sdata()`


<a id="mibi-tof-breast-8j6or82cq4tqtgeg0000"></a>
## Human breast

- uid: `8J6oR82CQ4tqtGeg0000`
- Page: /datasets/mibi-tof-breast-8j6or82cq4tqtgeg0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,048
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("8J6oR82CQ4tqtGeg0000").to_sdata()`


<a id="10x-xenium-pancreas-bgvq7ofrco0aufhx0000"></a>
## Mouse pancreas

- uid: `bGvQ7oFRCo0aUfHx0000`
- Page: /datasets/10x-xenium-pancreas-bgvq7ofrco0aufhx0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (cells): 236,220
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315243
- Publication: https://doi.org/10.1016/j.cell.2026.03.032
- Load: `Catalog().dataset("bGvQ7oFRCo0aUfHx0000").to_sdata()`


<a id="10x-xenium-small-intestine-xoworbfmvhh0fpdo0000"></a>
## Human small intestine

- uid: `XOworbFmvhh0fpDo0000`
- Page: /datasets/10x-xenium-small-intestine-xoworbfmvhh0fpdo0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: small intestine
- Modality: RNA
- Observations (cells): 50,588
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296331
- Publication: https://doi.org/10.1016/j.cell.2025.08.029
- Load: `Catalog().dataset("XOworbFmvhh0fpDo0000").to_sdata()`