# SpatialData-DB datasets, shard 9f

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-rc7d5fkwklogqbfm0000"></a>
## Mouse brain

- uid: `Rc7D5fkWkLOgqbFM0000`
- Page: /datasets/visium-spatial-gene-expression-brain-rc7d5fkwklogqbfm0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 4,442
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319409
- Publication: https://doi.org/10.1186/s40478-025-02219-1
- Collections: [geo-gse319409](/collections/md/8.md#geo-gse319409)
- Load: `Catalog().dataset("Rc7D5fkWkLOgqbFM0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-sehlo0pi1f1rtn7t0000"></a>
## Human kidney

- uid: `SEHlo0Pi1f1rTn7t0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-sehlo0pi1f1rtn7t0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: hypertensive nephropathy
- Modality: RNA
- Observations (spots): 4,892
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE339455
- Collections: [geo-gse339455](/collections/md/c.md#geo-gse339455)
- Load: `Catalog().dataset("SEHlo0Pi1f1rTn7t0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-bx6unag2omtrgnfv0000"></a>
## Mouse spinal cord

- uid: `BX6unAG2OmTrGnFV0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-bx6unag2omtrgnfv0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 313
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("BX6unAG2OmTrGnFV0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-yaqozadyabouzbjh0000"></a>
## Human brain

- uid: `yAQoZadYAbouzbJH0000`
- Page: /datasets/visium-spatial-gene-expression-brain-yaqozadyabouzbjh0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 1,112
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE237183
- Publication: https://doi.org/10.1016/j.cell.2024.03.029
- Collections: [geo-gse237183](/collections/md/d.md#geo-gse237183)
- Load: `Catalog().dataset("yAQoZadYAbouzbJH0000").to_sdata()`


<a id="visium-hd-central-amygdaloid-nucleus-r5vyxrq5qdleejwb0000"></a>
## Human central amygdaloid nucleus

- uid: `r5VyXRQ5qdlEEJWb0000`
- Page: /datasets/visium-hd-central-amygdaloid-nucleus-r5vyxrq5qdleejwb0000/
- Technology: Visium HD
- Organism: human
- Tissue: central amygdaloid nucleus
- Modality: RNA
- Observations (bins): 702,244
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9937426
- Collections: [geo-gse342738](/collections/md/8.md#geo-gse342738)
- Load: `Catalog().dataset("r5VyXRQ5qdlEEJWb0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-rq6udw2tnzftpqzd0000"></a>
## Mouse lung

- uid: `rq6uDW2TnzfTpQzd0000`
- Page: /datasets/visium-spatial-gene-expression-lung-rq6udw2tnzftpqzd0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: influenza
- Modality: RNA
- Observations (spots): 2,769
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE184384
- Publication: https://doi.org/10.1038/s41467-023-41387-3
- Collections: [geo-gse184384](/collections/md/5.md#geo-gse184384)
- Load: `Catalog().dataset("rq6uDW2TnzfTpQzd0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-onylj3bruxhy9wos0000"></a>
## Mouse pancreas

- uid: `onYlJ3BRUXHY9wOS0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-onylj3bruxhy9wos0000/
- Technology: Visium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (spots): 1,563
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE249121
- Publication: https://doi.org/10.1186/s13073-025-01452-6
- Collections: [geo-gse249121](/collections/md/d.md#geo-gse249121)
- Load: `Catalog().dataset("onYlJ3BRUXHY9wOS0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-tfbf9uoqwws5oypl0000"></a>
## Mouse colon

- uid: `TFbF9uoqWWs5OypL0000`
- Page: /datasets/visium-spatial-gene-expression-colon-tfbf9uoqwws5oypl0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 3,547
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE190595
- Publication: https://doi.org/10.1038/s41467-022-28497-0
- Load: `Catalog().dataset("TFbF9uoqWWs5OypL0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-jpsiakdkkrc994bo0000"></a>
## Mouse brain

- uid: `JpSIAKDkKRC994BO0000`
- Page: /datasets/visium-spatial-gene-expression-brain-jpsiakdkkrc994bo0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,841
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE203424
- Publication: https://doi.org/10.1002/alz.12821
- Collections: [geo-gse203424](/collections/md/7.md#geo-gse203424)
- Load: `Catalog().dataset("JpSIAKDkKRC994BO0000").to_sdata()`


<a id="visium-spatial-gene-expression-saphenous-vein-utdaef4yhm1oquws0000"></a>
## Human saphenous vein

- uid: `utDaEF4yHM1OQuWS0000`
- Page: /datasets/visium-spatial-gene-expression-saphenous-vein-utdaef4yhm1oquws0000/
- Technology: Visium
- Organism: human
- Tissue: saphenous vein
- Modality: RNA
- Observations (spots): 4,583
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310351
- Publication: https://doi.org/10.1152/ajpheart.00653.2025
- Collections: [geo-gse310351](/collections/md/a.md#geo-gse310351)
- Load: `Catalog().dataset("utDaEF4yHM1OQuWS0000").to_sdata()`


<a id="visium-spatial-gene-expression-mesenteric-artery-6ofmgvoqzr7ark0b0000"></a>
## Human mesenteric artery

- uid: `6ofMGvOQzr7ARk0b0000`
- Page: /datasets/visium-spatial-gene-expression-mesenteric-artery-6ofmgvoqzr7ark0b0000/
- Technology: Visium
- Organism: human
- Tissue: mesenteric artery
- Condition: type 2 diabetes mellitus
- Modality: RNA
- Observations (spots): 1,471
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293427
- Publication: https://doi.org/10.1126/scitranslmed.adu3761
- Collections: [geo-gse293427](/collections/md/7.md#geo-gse293427)
- Load: `Catalog().dataset("6ofMGvOQzr7ARk0b0000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-8lhwwc8xfvg21rth0000"></a>
## Human entorhinal cortex

- uid: `8lhwWC8XfvG21RtH0000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-8lhwwc8xfvg21rth0000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("8lhwWC8XfvG21RtH0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-sqww6mawks1bybdh0000"></a>
## Human pancreas

- uid: `sQwW6MAWKs1BYbDh0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-sqww6mawks1bybdh0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,559
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("sQwW6MAWKs1BYbDh0000").to_sdata()`


<a id="visium-spatial-gene-expression-hippocampal-formation-pwmvg2vw9mu6kgfr0000"></a>
## Human hippocampal formation

- uid: `PWMvg2Vw9mu6KGfR0000`
- Page: /datasets/visium-spatial-gene-expression-hippocampal-formation-pwmvg2vw9mu6kgfr0000/
- Technology: Visium
- Organism: human
- Tissue: hippocampal formation
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE264692
- Collections: [geo-gse264692](/collections/md/2.md#geo-gse264692)
- Load: `Catalog().dataset("PWMvg2Vw9mu6KGfR0000").to_sdata()`


<a id="10x-xenium-brain-xnolmxu6jpu6dg5j0000"></a>
## Mouse brain

- uid: `XnoLMxU6JpU6dg5j0000`
- Page: /datasets/10x-xenium-brain-xnolmxu6jpu6dg5j0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (cells): 112,292
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266971
- Publication: https://doi.org/10.1016/j.ccell.2024.08.012
- Load: `Catalog().dataset("XnoLMxU6JpU6dg5j0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-3h2dlkv18y7pqo7h0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `3H2DlKv18y7Pqo7h0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-3h2dlkv18y7pqo7h0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("3H2DlKv18y7Pqo7h0000").to_sdata()`


<a id="10x-xenium-brain-soucjqpy9uukeiri0000"></a>
## Mouse brain

- uid: `SOUcjQpY9uUkeiRI0000`
- Page: /datasets/10x-xenium-brain-soucjqpy9uukeiri0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (cells): 134,142
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266971
- Publication: https://doi.org/10.1016/j.ccell.2024.08.012
- Load: `Catalog().dataset("SOUcjQpY9uUkeiRI0000").to_sdata()`


<a id="vizgen-merscope-brain-w0nprjy0h1qxldds0000"></a>
## Mouse brain

- uid: `W0NPrJY0H1qxLDDs0000`
- Page: /datasets/vizgen-merscope-brain-w0nprjy0h1qxldds0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 378,211
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("W0NPrJY0H1qxLDDs0000").to_sdata()`


<a id="merfish-brain-r1ls5usfhdu1fdlq0000"></a>
## Mouse brain

- uid: `R1ls5USfhdu1fDLQ0000`
- Page: /datasets/merfish-brain-r1ls5usfhdu1fdlq0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 22,010
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("R1ls5USfhdu1fDLQ0000").to_sdata()`


<a id="mibi-tof-breast-0jrctdy3brzsrhxx0000"></a>
## Human breast

- uid: `0jRCtdy3BRZsRHxX0000`
- Page: /datasets/mibi-tof-breast-0jrctdy3brzsrhxx0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 393
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("0jRCtdy3BRZsRHxX0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-liver-svg8vtj2pti0jaws0000"></a>
## Mouse liver

- uid: `sVg8Vtj2PTI0jAws0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-liver-svg8vtj2pti0jaws0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: liver
- Modality: Metabolomics
- Observations: 10,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-04-16_08h17m59s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("sVg8Vtj2PTI0jAws0000").to_sdata()`


<a id="mibi-tof-brain-we6xesvx1sq9diqh0000"></a>
## Human brain

- uid: `WE6xesvX1SQ9dIqh0000`
- Page: /datasets/mibi-tof-brain-we6xesvx1sq9diqh0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: protein
- Observations: 1,817
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1579
- Collections: [bia-s-biad1579](/collections/md/2.md#bia-s-biad1579)
- Load: `Catalog().dataset("WE6xesvX1SQ9dIqh0000").to_sdata()`


<a id="mibi-tof-brain-cnzdfcwftmkfhzdi0000"></a>
## Human brain

- uid: `cnzdFCWFTMkfHzdi0000`
- Page: /datasets/mibi-tof-brain-cnzdfcwftmkfhzdi0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: protein
- Observations: 2,169
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1579
- Collections: [bia-s-biad1579](/collections/md/2.md#bia-s-biad1579)
- Load: `Catalog().dataset("cnzdFCWFTMkfHzdi0000").to_sdata()`


<a id="stereo-seq-brain-skbsqv9u0mcyo8bh0000"></a>
## Mouse brain

- uid: `SKBSqv9U0McyO8Bh0000`
- Page: /datasets/stereo-seq-brain-skbsqv9u0mcyo8bh0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations: 49,475
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("SKBSqv9U0McyO8Bh0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-liver-yijh4btx60glpbig0000"></a>
## Mouse liver

- uid: `yIjH4btX60GLPBig0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-liver-yijh4btx60glpbig0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: liver
- Modality: Metabolomics
- Observations: 10,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-04-14_14h45m46s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("yIjH4btX60GLPBig0000").to_sdata()`


<a id="mibi-tof-breast-yraqcxgqdrsjp7m60000"></a>
## Human breast

- uid: `YraQCxgqdRSJp7m60000`
- Page: /datasets/mibi-tof-breast-yraqcxgqdrsjp7m60000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,924
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("YraQCxgqdRSJp7m60000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-12puaq6vuvnf5uit0000"></a>
## Human skin of body

- uid: `12PuAQ6VuVNF5UIt0000`
- Page: /datasets/vizgen-merscope-skin-of-body-12puaq6vuvnf5uit0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 15,200
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("12PuAQ6VuVNF5UIt0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-rq0ccjz540qpfupb0000"></a>
## Human lymph node

- uid: `rQ0CcJZ540qpFUPb0000`
- Page: /datasets/phenocycler-fusion-lymph-node-rq0ccjz540qpfupb0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: Burkitt lymphoma
- Modality: protein
- Observations (cells): 14,966
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("rQ0CcJZ540qpFUPb0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-hafwhznorojbzlnn0000"></a>
## Human skin of body

- uid: `HAfWHZNOROJBzLNn0000`
- Page: /datasets/vizgen-merscope-skin-of-body-hafwhznorojbzlnn0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 5,221
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("HAfWHZNOROJBzLNn0000").to_sdata()`


<a id="10x-xenium-amygdala-ld2hvc1jbdggpp3o0000"></a>
## Human amygdala

- uid: `LD2hVc1JBDGGpP3o0000`
- Page: /datasets/10x-xenium-amygdala-ld2hvc1jbdggpp3o0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: amygdala
- Modality: RNA
- Observations (cells): 287,565
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342289
- Load: `Catalog().dataset("LD2hVc1JBDGGpP3o0000").to_sdata()`


<a id="mibi-tof-breast-asvbbzzrlyltg26d0000"></a>
## Human breast

- uid: `aSVbbZZRLyltg26d0000`
- Page: /datasets/mibi-tof-breast-asvbbzzrlyltg26d0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,043
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("aSVbbZZRLyltg26d0000").to_sdata()`