# SpatialData-DB datasets, shard 9d

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-large-intestine-akp99vmiu7i9txdx0000"></a>
## Human large intestine

- uid: `akP99vMiU7I9txDX0000`
- Page: /datasets/visium-spatial-gene-expression-large-intestine-akp99vmiu7i9txdx0000/
- Technology: Visium
- Organism: human
- Tissue: large intestine
- Condition: colorectal cancer
- Modality: RNA
- Observations (spots): 2,660
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-intestine-cancer-1-standard
- Load: `Catalog().dataset("akP99vMiU7I9txDX0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-ec5swo1hzxbwlvth0000"></a>
## Mouse spinal cord

- uid: `Ec5sWo1HZxbWlvth0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-ec5swo1hzxbwlvth0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 218
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("Ec5sWo1HZxbWlvth0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-k0dag6wbeggnjult0000"></a>
## Mouse spinal cord

- uid: `K0dAg6wbegGnjULt0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-k0dag6wbeggnjult0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 305
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("K0dAg6wbegGnjULt0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-ex9mwenlf4mit0a40000"></a>
## Mouse spinal cord

- uid: `EX9mWenlf4Mit0a40000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-ex9mwenlf4mit0a40000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 340
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("EX9mWenlf4Mit0a40000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-j7r8knks1qj3jnqn0000"></a>
## Mouse spinal cord

- uid: `j7r8kNKS1qJ3Jnqn0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-j7r8knks1qj3jnqn0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 108
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("j7r8kNKS1qJ3Jnqn0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-4wepcp6jwxr6xyqz0000"></a>
## Human brain

- uid: `4wEpcP6jWXR6XYQZ0000`
- Page: /datasets/visium-spatial-gene-expression-brain-4wepcp6jwxr6xyqz0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (spots): 2,705
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://academic.oup.com/neuro-oncology/article/24/Supplement_1/i45/6600572
- Publication: https://doi.org/10.1093/neuonc/noac079.165
- Collections: [doi-10-1093-neuonc-noac079-165](/collections/md/6.md#doi-10-1093-neuonc-noac079-165)
- Load: `Catalog().dataset("4wEpcP6jWXR6XYQZ0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-adwrf9r0zehho0p30000"></a>
## Human brain

- uid: `AdwRf9R0ZEhhO0p30000`
- Page: /datasets/visium-spatial-gene-expression-brain-adwrf9r0zehho0p30000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,661
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41593-020-00787-0#data-availability
- Publication: https://doi.org/10.1038/s41593-020-00787-0
- Collections: [doi-10-1038-s41593-020-00787-0](/collections/md/3.md#doi-10-1038-s41593-020-00787-0)
- Load: `Catalog().dataset("AdwRf9R0ZEhhO0p30000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-7j5yycds7nxtfm3m0000"></a>
## Human heart

- uid: `7j5YYCds7nxTFM3M0000`
- Page: /datasets/visium-spatial-gene-expression-heart-7j5yycds7nxtfm3m0000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 1,702
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("7j5YYCds7nxTFM3M0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-sqy7y6b7y6b3d4ze0000"></a>
## Human prostate gland

- uid: `Sqy7y6B7y6b3d4Ze0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-sqy7y6b7y6b3d4ze0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostatic acinar adenocarcinoma
- Modality: RNA
- Observations (spots): 3,749
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05023-2
- Publication: https://doi.org/10.1038/s41586-022-05023-2
- Collections: [doi-10-1038-s41586-022-05023-2](/collections/md/5.md#doi-10-1038-s41586-022-05023-2)
- Load: `Catalog().dataset("Sqy7y6B7y6b3d4Ze0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-un7goo5apjlbj3jn0000"></a>
## Mouse brain

- uid: `un7goO5aPjLBj3jn0000`
- Page: /datasets/visium-spatial-gene-expression-brain-un7goo5apjlbj3jn0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,714
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285858
- Publication: https://doi.org/10.1016/j.neuron.2025.05.014
- Collections: [geo-gse285858](/collections/md/d.md#geo-gse285858)
- Load: `Catalog().dataset("un7goO5aPjLBj3jn0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-lmg5vibdbpw9a1vs0000"></a>
## Mouse heart

- uid: `lMG5vIbdBPW9A1VS0000`
- Page: /datasets/visium-spatial-gene-expression-heart-lmg5vibdbpw9a1vs0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Modality: RNA
- Observations (spots): 1,935
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE218759
- Publication: https://doi.org/10.1161/CIRCULATIONAHA.123.067504
- Collections: [geo-gse218759](/collections/md/4.md#geo-gse218759)
- Load: `Catalog().dataset("lMG5vIbdBPW9A1VS0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-4v3o8nbmuglha2ax0000"></a>
## Human basal ganglion

- uid: `4V3o8NbmUGLHA2Ax0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-4v3o8nbmuglha2ax0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 64,776
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("4V3o8NbmUGLHA2Ax0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-ceucgr2hwfdotyu20000"></a>
## Human pancreas

- uid: `CEucgR2HWFDotyU20000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-ceucgr2hwfdotyu20000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,901
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("CEucgR2HWFDotyU20000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-uy1oehkwf7loaecc0000"></a>
## Human basal ganglion

- uid: `uy1oEHkWF7lOaeCC0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-uy1oehkwf7loaecc0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 68,931
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("uy1oEHkWF7lOaeCC0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-2sbvlewqmyaaazgi0000"></a>
## Human basal ganglion

- uid: `2SBvlewqMYAaAzgI0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-2sbvlewqmyaaazgi0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 29,933
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("2SBvlewqMYAaAzgI0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-nvgggnqlsoyipnmk0000"></a>
## Mouse brain

- uid: `NvGGGNqlSOyIpNmK0000`
- Page: /datasets/visium-spatial-gene-expression-brain-nvgggnqlsoyipnmk0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 3,499
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282203
- Publication: https://doi.org/10.64898/2026.01.26.701799
- Collections: [geo-gse282203](/collections/md/3.md#geo-gse282203)
- Load: `Catalog().dataset("NvGGGNqlSOyIpNmK0000").to_sdata()`


<a id="visium-spatial-gene-expression-oral-cavity-jfs5zjv7kp5vme0m0000"></a>
## Human oral cavity

- uid: `Jfs5zjv7Kp5vme0m0000`
- Page: /datasets/visium-spatial-gene-expression-oral-cavity-jfs5zjv7kp5vme0m0000/
- Technology: Visium
- Organism: human
- Tissue: oral cavity
- Condition: oral cavity squamous cell carcinoma
- Modality: RNA
- Observations (spots): 2,475
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE208253
- Publication: https://doi.org/10.1038/s41467-023-40271-4
- Collections: [geo-gse208253](/collections/md/e.md#geo-gse208253)
- Load: `Catalog().dataset("Jfs5zjv7Kp5vme0m0000").to_sdata()`


<a id="visium-spatial-gene-expression-anterior-cingulate-cortex-g97wkoosutwhxma60001"></a>
## Human anterior cingulate cortex

- uid: `G97wKooSutWHxmA60001`
- Page: /datasets/visium-spatial-gene-expression-anterior-cingulate-cortex-g97wkoosutwhxma60001/
- Technology: Visium
- Organism: human
- Tissue: anterior cingulate cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296789
- Publication: https://doi.org/10.1016/j.celrep.2026.117500
- Collections: [geo-gse296789](/collections/md/0.md#geo-gse296789)
- Load: `Catalog().dataset("G97wKooSutWHxmA60001").to_sdata()`


<a id="visium-spatial-gene-expression-liver-tcs3jzmacbn3w8jo0000"></a>
## Mouse liver

- uid: `tCS3JzmacbN3w8jO0000`
- Page: /datasets/visium-spatial-gene-expression-liver-tcs3jzmacbn3w8jo0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 1,908
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE236424
- Collections: [geo-gse236424](/collections/md/3.md#geo-gse236424)
- Load: `Catalog().dataset("tCS3JzmacbN3w8jO0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-nia2ghsnb9pppu8m0000"></a>
## Mouse lung

- uid: `NIa2gHsnB9pppu8M0000`
- Page: /datasets/visium-spatial-gene-expression-lung-nia2ghsnb9pppu8m0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Modality: RNA
- Observations (spots): 4,936
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274767
- Publication: https://doi.org/10.1128/mbio.02562-24
- Collections: [geo-gse274767](/collections/md/7.md#geo-gse274767)
- Load: `Catalog().dataset("NIa2gHsnB9pppu8M0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-xecebweziututyhj0001"></a>
## Mouse spinal cord

- uid: `xECebWEziUTuTyHJ0001`
- Page: /datasets/spatial-transcriptomics-spinal-cord-xecebweziututyhj0001/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 272
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("xECebWEziUTuTyHJ0001").to_sdata()`


<a id="visium-spatial-gene-expression-bone-element-500mp4c5ml5q1gha0000"></a>
## Human bone element

- uid: `500mp4c5ml5q1gha0000`
- Page: /datasets/visium-spatial-gene-expression-bone-element-500mp4c5ml5q1gha0000/
- Technology: Visium
- Organism: human
- Tissue: bone element
- Condition: osteosarcoma
- Modality: RNA
- Observations (spots): 754
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293065
- Publication: https://doi.org/10.1038/s41467-026-74603-x
- Collections: [geo-gse293065](/collections/md/7.md#geo-gse293065)
- Load: `Catalog().dataset("500mp4c5ml5q1gha0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ptiioiiyhb2drlyp0000"></a>
## Mouse brain

- uid: `pTIIOiIYHb2dRlYp0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ptiioiiyhb2drlyp0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (spots): 1,398
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE272236
- Publication: https://doi.org/10.1038/s41467-025-66985-1
- Collections: [geo-gse272236](/collections/md/8.md#geo-gse272236)
- Load: `Catalog().dataset("pTIIOiIYHb2dRlYp0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-hjfg6eqkr8okvkom0000"></a>
## Human pancreas

- uid: `hjfG6eqKr8oKVkom0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-hjfg6eqkr8okvkom0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,568
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("hjfG6eqKr8oKVkom0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-mcqxkrjo8duwgdvt0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `McqXkRJO8duwGDVT0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-mcqxkrjo8duwgdvt0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("McqXkRJO8duwGDVT0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-2qwrtpis3ve3knap0000"></a>
## Human brain

- uid: `2qwrtPiS3vE3knAp0000`
- Page: /datasets/visium-spatial-gene-expression-brain-2qwrtpis3ve3knap0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: metastatic malignant neoplasm
- Modality: RNA
- Observations (spots): 3,735
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325196
- Collections: [geo-gse325196](/collections/md/2.md#geo-gse325196)
- Load: `Catalog().dataset("2qwrtPiS3vE3knAp0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-x2jlvggagsmqlvbh0000"></a>
## Human lung

- uid: `X2jLVGgAgSmQLvbH0000`
- Page: /datasets/visium-spatial-gene-expression-lung-x2jlvggagsmqlvbh0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (spots): 2,894
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE322553
- Publication: https://doi.org/10.1126/science.ady1678
- Collections: [geo-gse322553](/collections/md/9.md#geo-gse322553)
- Load: `Catalog().dataset("X2jLVGgAgSmQLvbH0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-hajza5iixv6g83ih0000"></a>
## Human ovary

- uid: `HAjzA5iiXv6G83iH0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-hajza5iixv6g83ih0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 475
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327312
- Collections: [geo-gse327312](/collections/md/b.md#geo-gse327312)
- Load: `Catalog().dataset("HAjzA5iiXv6G83iH0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-nidbqizmoefoq8rm0000"></a>
## Human lung

- uid: `nidbqiZMOefOQ8Rm0000`
- Page: /datasets/visium-spatial-gene-expression-lung-nidbqizmoefoq8rm0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: obsolete idiopathic pulmonary fibrosis
- Modality: RNA
- Observations (spots): 1,452
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285246
- Publication: https://doi.org/10.1183/13993003.00022-2025
- Collections: [geo-gse285246](/collections/md/b.md#geo-gse285246)
- Load: `Catalog().dataset("nidbqiZMOefOQ8Rm0000").to_sdata()`


<a id="10x-xenium-breast-isk4xamndjio3bd90000"></a>
## Human breast

- uid: `isk4XamNDjIO3BD90000`
- Page: /datasets/10x-xenium-breast-isk4xamndjio3bd90000/
- Technology: 10x Xenium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (cells): 142,272
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243168
- Publication: https://doi.org/10.1038/s41467-023-43458-x
- Load: `Catalog().dataset("isk4XamNDjIO3BD90000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-marrow-dnkpgrucjdpcwvmc0000"></a>
## Human bone marrow

- uid: `DnKPgRUcJDpCWvMc0000`
- Page: /datasets/visium-spatial-gene-expression-bone-marrow-dnkpgrucjdpcwvmc0000/
- Technology: Visium
- Organism: human
- Tissue: bone marrow
- Condition: acute myeloid leukemia
- Modality: RNA
- Observations (spots): 2,766
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8576301
- Collections: [geo-gse279576](/collections/md/c.md#geo-gse279576)
- Load: `Catalog().dataset("DnKPgRUcJDpCWvMc0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-axgdcjemcceusk3k0000"></a>
## Rat heart

- uid: `aXgDcjemcCeusk3K0000`
- Page: /datasets/visium-spatial-gene-expression-heart-axgdcjemcceusk3k0000/
- Technology: Visium
- Organism: rat
- Tissue: heart
- Condition: myocardial infarction
- Modality: RNA
- Observations (spots): 4,231
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299772
- Publication: https://doi.org/10.1101/2025.11.08.687255
- Collections: [geo-gse299772](/collections/md/2.md#geo-gse299772)
- Load: `Catalog().dataset("aXgDcjemcCeusk3K0000").to_sdata()`


<a id="vizgen-merscope-brain-sfbvsxxjfuaqfaur0000"></a>
## Mouse brain

- uid: `SFBVSxXJFuaQFAUr0000`
- Page: /datasets/vizgen-merscope-brain-sfbvsxxjfuaqfaur0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 80,305
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("SFBVSxXJFuaQFAUr0000").to_sdata()`


<a id="vizgen-merscope-brain-lio7b3bsxdifpore0000"></a>
## Mouse brain

- uid: `LiO7b3bSxDIfpOrE0000`
- Page: /datasets/vizgen-merscope-brain-lio7b3bsxdifpore0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 8,177
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("LiO7b3bSxDIfpOrE0000").to_sdata()`


<a id="vizgen-merscope-heart-left-ventricle-hilnivj8gsca5hrs0000"></a>
## Human heart left ventricle

- uid: `HiLNIvJ8gSca5hrS0000`
- Page: /datasets/vizgen-merscope-heart-left-ventricle-hilnivj8gsca5hrs0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: heart left ventricle
- Modality: RNA
- Observations (cells): 183,310
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315408
- Load: `Catalog().dataset("HiLNIvJ8gSca5hrS0000").to_sdata()`


<a id="mibi-tof-brain-xbcs0zkgtqawu6tm0000"></a>
## Human brain

- uid: `XBCS0ZkGtqawU6Tm0000`
- Page: /datasets/mibi-tof-brain-xbcs0zkgtqawu6tm0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: protein
- Observations: 2,296
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1579
- Collections: [bia-s-biad1579](/collections/md/2.md#bia-s-biad1579)
- Load: `Catalog().dataset("XBCS0ZkGtqawU6Tm0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-w8it4aixi9rorqz20000"></a>
## Human skin of body

- uid: `w8it4AixI9RORQz20000`
- Page: /datasets/vizgen-merscope-skin-of-body-w8it4aixi9rorqz20000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 10,967
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("w8it4AixI9RORQz20000").to_sdata()`


<a id="vizgen-merscope-brain-wxkxljpenonbequm0000"></a>
## Mouse brain

- uid: `wxkXLjpenOnbeQum0000`
- Page: /datasets/vizgen-merscope-brain-wxkxljpenonbequm0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (cells): 113,880
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE275026
- Publication: https://doi.org/10.1038/s41586-025-09662-z
- Collections: [geo-gse275026](/collections/md/f.md#geo-gse275026)
- Load: `Catalog().dataset("wxkXLjpenOnbeQum0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-xi4n2gjr68ttaesg0000"></a>
## Human skin of body

- uid: `XI4N2Gjr68ttaesG0000`
- Page: /datasets/vizgen-merscope-skin-of-body-xi4n2gjr68ttaesg0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 4,054
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("XI4N2Gjr68ttaesG0000").to_sdata()`


<a id="mibi-tof-breast-kbrwzwa85wyqxr1t0000"></a>
## Human breast

- uid: `KBrWzWa85wyqXR1T0000`
- Page: /datasets/mibi-tof-breast-kbrwzwa85wyqxr1t0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,895
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("KBrWzWa85wyqXR1T0000").to_sdata()`


<a id="mibi-tof-breast-1jc5p6cfhmikfafr0000"></a>
## Human breast

- uid: `1jC5P6CfHmiKFaFr0000`
- Page: /datasets/mibi-tof-breast-1jc5p6cfhmikfafr0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,784
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("1jC5P6CfHmiKFaFr0000").to_sdata()`


<a id="vizgen-merscope-brain-4eamttqltkqojjzn0000"></a>
## Mouse brain

- uid: `4EAMTtqLtKqoJJzN0000`
- Page: /datasets/vizgen-merscope-brain-4eamttqltkqojjzn0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 11,262
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("4EAMTtqLtKqoJJzN0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-sbjmf4hbtvfkpg120000"></a>
## Human lymph node

- uid: `sbJMf4HBTVFkpg120000`
- Page: /datasets/phenocycler-fusion-lymph-node-sbjmf4hbtvfkpg120000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Modality: protein
- Observations (cells): 23,330
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("sbJMf4HBTVFkpg120000").to_sdata()`


<a id="mibi-tof-breast-zk5tgbeya5fu8xd50000"></a>
## Human breast

- uid: `zK5tgbeya5fU8XD50000`
- Page: /datasets/mibi-tof-breast-zk5tgbeya5fu8xd50000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,345
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("zK5tgbeya5fU8XD50000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-1vzq24kvdooy7veh0000"></a>
## Human kidney

- uid: `1VZq24kVdOoY7vEh0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-1vzq24kvdooy7veh0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 1,280
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-04-19_22h47m44s
- Load: `Catalog().dataset("1VZq24kVdOoY7vEh0000").to_sdata()`


<a id="10x-xenium-small-intestine-t4tpgxdfyfzrdz7u0000"></a>
## Human small intestine

- uid: `T4TPgXDfyFZrDZ7u0000`
- Page: /datasets/10x-xenium-small-intestine-t4tpgxdfyfzrdz7u0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: small intestine
- Condition: Crohn disease
- Modality: RNA
- Observations (cells): 150,072
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296331
- Publication: https://doi.org/10.1016/j.cell.2025.08.029
- Load: `Catalog().dataset("T4TPgXDfyFZrDZ7u0000").to_sdata()`


<a id="10x-xenium-pancreas-tokjgfkiyilo9vjm0000"></a>
## Mouse pancreas

- uid: `toKjGfkiyIlo9VJM0000`
- Page: /datasets/10x-xenium-pancreas-tokjgfkiyilo9vjm0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (cells): 107,097
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315243
- Publication: https://doi.org/10.1016/j.cell.2026.03.032
- Load: `Catalog().dataset("toKjGfkiyIlo9VJM0000").to_sdata()`


<a id="10x-xenium-lung-txh1nlwp3gxpkpok0000"></a>
## Human lung

- uid: `txh1nLwp3gxpkPOk0000`
- Page: /datasets/10x-xenium-lung-txh1nlwp3gxpkpok0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: chronic obstructive pulmonary disease
- Modality: RNA
- Observations (cells): 279,263
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310162
- Load: `Catalog().dataset("txh1nLwp3gxpkPOk0000").to_sdata()`


<a id="vizgen-merscope-brain-l1m6vws4iyv8nxek0000"></a>
## Mouse brain

- uid: `L1m6Vws4iYv8NxEk0000`
- Page: /datasets/vizgen-merscope-brain-l1m6vws4iyv8nxek0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 7,572
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("L1m6Vws4iYv8NxEk0000").to_sdata()`


<a id="vizgen-merscope-unknown-egdqnx8u3ifwg0hs0000"></a>
## Mouse unknown

- uid: `EgdQNX8U3IFWg0hs0000`
- Page: /datasets/vizgen-merscope-unknown-egdqnx8u3ifwg0hs0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: unknown
- Modality: RNA
- Observations (cells): 147,961
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301696
- Load: `Catalog().dataset("EgdQNX8U3IFWg0hs0000").to_sdata()`


<a id="merfish-brain-vw3t8akh2qvxv2ue0000"></a>
## Mouse brain

- uid: `VW3T8akH2qvXV2uE0000`
- Page: /datasets/merfish-brain-vw3t8akh2qvxv2ue0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 5,204
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("VW3T8akH2qvXV2uE0000").to_sdata()`