# SpatialData-DB datasets, shard 9c

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-breast-iibfogvrzqxa4sqc0000"></a>
## Human breast

- uid: `iIbfOgVRzQXa4sQc0000`
- Page: /datasets/visium-hd-breast-iibfogvrzqxa4sqc0000/
- Technology: Visium HD
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (bins): 583,104
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-libraries-human-breast-cancer-ff-ultima
- Load: `Catalog().dataset("iIbfOgVRzQXa4sQc0000").to_sdata()`


<a id="visium-spatial-gene-expression-inferior-parietal-cortex-m25y8ikx3fvxe2000000"></a>
## Human inferior parietal cortex

- uid: `M25y8IkX3fvxE2000000`
- Page: /datasets/visium-spatial-gene-expression-inferior-parietal-cortex-m25y8ikx3fvxe2000000/
- Technology: Visium
- Organism: human
- Tissue: inferior parietal cortex
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 9,564
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE263079
- Publication: https://doi.org/10.1038/s41591-025-03574-1
- Collections: [geo-gse263079](/collections/md/2.md#geo-gse263079)
- Load: `Catalog().dataset("M25y8IkX3fvxE2000000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-ujzkfapajsbokcun0000"></a>
## Mouse spinal cord

- uid: `UjzKFAPAJsboKCuN0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-ujzkfapajsbokcun0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 270
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("UjzKFAPAJsboKCuN0000").to_sdata()`


<a id="spatial-transcriptomics-brain-zpn8oosiw3iyhjif0000"></a>
## Mouse brain

- uid: `zpn8OoSiW3iYHJIf0000`
- Page: /datasets/spatial-transcriptomics-brain-zpn8oosiw3iyhjif0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 406
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("zpn8OoSiW3iYHJIf0000").to_sdata()`


<a id="spatial-transcriptomics-breast-6r0awvlngq8duch90000"></a>
## Human breast

- uid: `6r0AwvlNGQ8DuCh90000`
- Page: /datasets/spatial-transcriptomics-breast-6r0awvlngq8duch90000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 277
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/34650042/
- Publication: https://doi.org/10.1038/s41467-021-26271-2
- Collections: [doi-10-1038-s41467-021-26271-2](/collections/md/6.md#doi-10-1038-s41467-021-26271-2)
- Load: `Catalog().dataset("6r0AwvlNGQ8DuCh90000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-wzow92ntyg0nmwpq0000"></a>
## Mouse spinal cord

- uid: `WZoW92ntYg0nmWPq0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-wzow92ntyg0nmwpq0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 194
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("WZoW92ntYg0nmWPq0000").to_sdata()`


<a id="visium-spatial-gene-expression-synovial-membrane-of-synovial-joint-bssqr8jduquvalfl0001"></a>
## Human synovial membrane of synovial joint

- uid: `BSsQr8JDUQUvalfL0001`
- Page: /datasets/visium-spatial-gene-expression-synovial-membrane-of-synovial-joint-bssqr8jduquvalfl0001/
- Technology: Visium
- Organism: human
- Tissue: synovial membrane of synovial joint
- Condition: rheumatoid arthritis
- Modality: RNA
- Observations (spots): 488
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347797
- Collections: [geo-gse347797](/collections/md/b.md#geo-gse347797)
- Load: `Catalog().dataset("BSsQr8JDUQUvalfL0001").to_sdata()`


<a id="visium-spatial-gene-expression-cornea-h5z55ewsruv8yeir0000"></a>
## Human cornea

- uid: `H5z55EWSrUV8YeiR0000`
- Page: /datasets/visium-spatial-gene-expression-cornea-h5z55ewsruv8yeir0000/
- Technology: Visium
- Organism: human
- Tissue: cornea
- Condition: keratoconus
- Modality: RNA
- Observations (spots): 1,368
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE303036
- Publication: https://doi.org/10.1167/iovs.67.4.7
- Collections: [geo-gse303036](/collections/md/b.md#geo-gse303036)
- Load: `Catalog().dataset("H5z55EWSrUV8YeiR0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-vcbak3aroxnb4pfc0000"></a>
## Mouse liver

- uid: `vcBak3arOXNb4PFC0000`
- Page: /datasets/visium-spatial-gene-expression-liver-vcbak3aroxnb4pfc0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: metabolic dysfunction-associated steatotic liver disease
- Modality: RNA
- Observations (spots): 2,348
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5764420
- Collections: [geo-gse192741](/collections/md/4.md#geo-gse192741)
- Load: `Catalog().dataset("vcBak3arOXNb4PFC0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-ylpbnwsllvoqtcae0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `yLPbNwslLvoqtcae0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-ylpbnwsllvoqtcae0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: major depressive disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("yLPbNwslLvoqtcae0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-qad6h5vw9lm637ai0000"></a>
## Mouse lung

- uid: `Qad6h5vW9Lm637AI0000`
- Page: /datasets/visium-spatial-gene-expression-lung-qad6h5vw9lm637ai0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: lung cancer
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295967
- Collections: [geo-gse295967](/collections/md/1.md#geo-gse295967)
- Load: `Catalog().dataset("Qad6h5vW9Lm637AI0000").to_sdata()`


<a id="10x-xenium-brain-lobca0rher8t4rlc0000"></a>
## Mouse brain

- uid: `lobcA0rHER8t4RLc0000`
- Page: /datasets/10x-xenium-brain-lobca0rher8t4rlc0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 72,622
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330686
- Publication: https://doi.org/10.1186/s12974-026-03989-8
- Load: `Catalog().dataset("lobcA0rHER8t4RLc0000").to_sdata()`


<a id="10x-xenium-hypothalamus-f5pdzmwh3n3wnxn80000"></a>
## Mouse hypothalamus

- uid: `f5Pdzmwh3N3WNxN80000`
- Page: /datasets/10x-xenium-hypothalamus-f5pdzmwh3n3wnxn80000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: hypothalamus
- Condition: autism spectrum disorder
- Modality: RNA
- Observations (cells): 37,269
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE318415
- Load: `Catalog().dataset("f5Pdzmwh3N3WNxN80000").to_sdata()`


<a id="mibi-tof-lymph-node-ilxgyoiupccolz9i0000"></a>
## Human lymph node

- uid: `IlXGYoIuPcCOlZ9I0000`
- Page: /datasets/mibi-tof-lymph-node-ilxgyoiupccolz9i0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,517
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("IlXGYoIuPcCOlZ9I0000").to_sdata()`


<a id="mibi-tof-breast-t86dkxlvcrjin6eq0000"></a>
## Human breast

- uid: `T86DkXLvCRJIn6eQ0000`
- Page: /datasets/mibi-tof-breast-t86dkxlvcrjin6eq0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,601
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("T86DkXLvCRJIn6eQ0000").to_sdata()`


<a id="mibi-tof-brain-njudwjzzc394vhv50000"></a>
## Human brain

- uid: `nJudWjZzC394VhV50000`
- Page: /datasets/mibi-tof-brain-njudwjzzc394vhv50000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: protein
- Observations: 1,503
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1579
- Collections: [bia-s-biad1579](/collections/md/2.md#bia-s-biad1579)
- Load: `Catalog().dataset("nJudWjZzC394VhV50000").to_sdata()`


<a id="mibi-tof-breast-ggfmtvcuengrj46s0000"></a>
## Human breast

- uid: `GGFmTvcuEngRj46S0000`
- Page: /datasets/mibi-tof-breast-ggfmtvcuengrj46s0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,614
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("GGFmTvcuEngRj46S0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-urjereab3bhvfocc0000"></a>
## Human skin of body

- uid: `URjEreAb3bHvfOCc0000`
- Page: /datasets/vizgen-merscope-skin-of-body-urjereab3bhvfocc0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 4,419
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("URjEreAb3bHvfOCc0000").to_sdata()`


<a id="vizgen-merscope-unknown-x8epzesw37wvxd620000"></a>
## Human unknown

- uid: `x8EPZESW37Wvxd620000`
- Page: /datasets/vizgen-merscope-unknown-x8epzesw37wvxd620000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: unknown
- Modality: RNA
- Observations (cells): 13,134
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE308147
- Publication: https://doi.org/10.1038/s41467-025-64990-y
- Collections: [geo-gsm9238734](/collections/md/8.md#geo-gsm9238734)
- Load: `Catalog().dataset("x8EPZESW37Wvxd620000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-d9wpudfgzrkzxpo20000"></a>
## Human kidney

- uid: `D9WpUDFgZrKzXpO20000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-d9wpudfgzrkzxpo20000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 5,040
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-01-19_18h40m47s
- Load: `Catalog().dataset("D9WpUDFgZrKzXpO20000").to_sdata()`


<a id="mibi-tof-breast-yr6dizrywla5esk20000"></a>
## Human breast

- uid: `yR6dIzrywLa5esK20000`
- Page: /datasets/mibi-tof-breast-yr6dizrywla5esk20000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,249
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("yR6dIzrywLa5esK20000").to_sdata()`


<a id="vizgen-merscope-brain-dy3nhvkts0pbxbkj0000"></a>
## Mouse brain

- uid: `dy3NhVKTs0pbXBkj0000`
- Page: /datasets/vizgen-merscope-brain-dy3nhvkts0pbxbkj0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 9,703
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("dy3NhVKTs0pbXBkj0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-liver-ncvhdlrvt31rh1430000"></a>
## Mouse liver

- uid: `ncvHDlRVt31rh1430000`
- Page: /datasets/maldi-mass-spectrometry-imaging-liver-ncvhdlrvt31rh1430000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: liver
- Modality: Metabolomics
- Observations: 10,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-04-16_08h18m39s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("ncvHDlRVt31rh1430000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-0yetdjey77wfw4io0000"></a>
## Human middle temporal gyrus

- uid: `0YEtDJey77wfW4iO0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-0yetdjey77wfw4io0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 18,765
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("0YEtDJey77wfW4iO0000").to_sdata()`


<a id="mibi-tof-breast-hiuatqnowrzfrca30000"></a>
## Human breast

- uid: `HiUAtqNowRZfrCA30000`
- Page: /datasets/mibi-tof-breast-hiuatqnowrzfrca30000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,764
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("HiUAtqNowRZfrCA30000").to_sdata()`