# SpatialData-DB datasets, shard 9a

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-mammary-gland-5eneisiscx4yxe9g0000"></a>
## Rat mammary gland

- uid: `5ENeIsIsCx4yXE9g0000`
- Page: /datasets/visium-spatial-gene-expression-mammary-gland-5eneisiscx4yxe9g0000/
- Technology: Visium
- Organism: rat
- Tissue: mammary gland
- Modality: RNA
- Observations (spots): 2,543
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE253585
- Publication: https://doi.org/10.1016/j.ccell.2026.03.015
- Collections: [geo-gse253585](/collections/md/8.md#geo-gse253585)
- Load: `Catalog().dataset("5ENeIsIsCx4yXE9g0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-bcfco58jpi1kgpxv0000"></a>
## Human colon

- uid: `bcFco58JPI1KGPxv0000`
- Page: /datasets/visium-spatial-gene-expression-colon-bcfco58jpi1kgpxv0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 11,709
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312204
- Publication: https://doi.org/10.1038/s41467-026-71944-5
- Collections: [geo-gse312204](/collections/md/4.md#geo-gse312204)
- Load: `Catalog().dataset("bcFco58JPI1KGPxv0000").to_sdata()`


<a id="spatial-transcriptomics-brain-qa6bvamj8hswojxm0000"></a>
## Mouse brain

- uid: `qa6Bvamj8HSwojxm0000`
- Page: /datasets/spatial-transcriptomics-brain-qa6bvamj8hswojxm0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 591
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("qa6Bvamj8HSwojxm0000").to_sdata()`


<a id="visium-spatial-gene-expression-small-intestine-waujovow1gr35k4w0000"></a>
## Human small intestine

- uid: `wAUjovOW1gr35k4W0000`
- Page: /datasets/visium-spatial-gene-expression-small-intestine-waujovow1gr35k4w0000/
- Technology: Visium
- Organism: human
- Tissue: small intestine
- Condition: small intestine neuroendocrine neoplasm
- Modality: RNA
- Observations (spots): 823
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301265
- Publication: https://doi.org/10.1158/1078-0432.CCR-25-2854
- Collections: [geo-gse301265](/collections/md/a.md#geo-gse301265)
- Load: `Catalog().dataset("wAUjovOW1gr35k4W0000").to_sdata()`


<a id="spatial-transcriptomics-brain-cd1tswuqd8nceqqt0000"></a>
## Mouse brain

- uid: `CD1tSwUQD8ncEqQT0000`
- Page: /datasets/spatial-transcriptomics-brain-cd1tswuqd8nceqqt0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 574
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("CD1tSwUQD8ncEqQT0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-miplzmo5bnpmicp30000"></a>
## Human intestine

- uid: `mIplzMo5BnpMicP30000`
- Page: /datasets/visium-spatial-gene-expression-intestine-miplzmo5bnpmicp30000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Modality: RNA
- Observations (spots): 3,320
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/34845373/
- Publication: https://doi.org/10.1038/s41587-021-01075-3
- Collections: [doi-10-1038-s41587-021-01075-3](/collections/md/a.md#doi-10-1038-s41587-021-01075-3)
- Load: `Catalog().dataset("mIplzMo5BnpMicP30000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-csgog2gy7prio2jy0000"></a>
## Mouse spinal cord

- uid: `cSGOg2gY7prIo2jY0000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-csgog2gy7prio2jy0000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Condition: spinal cord injury
- Modality: RNA
- Observations (spots): 1,558
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE256397
- Publication: https://doi.org/10.1016/j.devcel.2024.06.016
- Collections: [geo-gse256397](/collections/md/3.md#geo-gse256397)
- Load: `Catalog().dataset("cSGOg2gY7prIo2jY0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-f3qzf2lyb26motas0000"></a>
## Mouse spinal cord

- uid: `F3QZF2LyB26moTAs0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-f3qzf2lyb26motas0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 312
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("F3QZF2LyB26moTAs0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-0wqovvjgagajm5aa0000"></a>
## Human breast

- uid: `0WqovVjgagAJM5aa0000`
- Page: /datasets/visium-spatial-gene-expression-breast-0wqovvjgagajm5aa0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 1,325
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE210616
- Publication: https://doi.org/10.1158/0008-5472.CAN-22-2682
- Collections: [geo-gse210616](/collections/md/8.md#geo-gse210616)
- Load: `Catalog().dataset("0WqovVjgagAJM5aa0000").to_sdata()`


<a id="visium-spatial-gene-expression-ilium-t0orkzdaocf08kds0001"></a>
## Human ilium

- uid: `T0OrKzdaoCF08kds0001`
- Page: /datasets/visium-spatial-gene-expression-ilium-t0orkzdaocf08kds0001/
- Technology: Visium
- Organism: human
- Tissue: ilium
- Modality: RNA
- Observations (spots): 152
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281317
- Publication: https://doi.org/10.1038/s41586-025-09399-9
- Collections: [geo-gse281317](/collections/md/6.md#geo-gse281317)
- Load: `Catalog().dataset("T0OrKzdaoCF08kds0001").to_sdata()`


<a id="visium-spatial-gene-expression-brain-9chwqcbizafusdnc0000"></a>
## Mouse brain

- uid: `9ChwqCBIzaFUsdNc0000`
- Page: /datasets/visium-spatial-gene-expression-brain-9chwqcbizafusdnc0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,981
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("9ChwqCBIzaFUsdNc0000").to_sdata()`


<a id="visium-spatial-gene-expression-aortic-valve-leaflet-aljdknjr1njebjge0000"></a>
## Human aortic valve leaflet

- uid: `aljDkNJr1njeBJGE0000`
- Page: /datasets/visium-spatial-gene-expression-aortic-valve-leaflet-aljdknjr1njebjge0000/
- Technology: Visium
- Organism: human
- Tissue: aortic valve leaflet
- Condition: aortic valve stenosis
- Modality: RNA
- Observations (spots): 1,693
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306288
- Publication: https://doi.org/10.1161/ATVBAHA.126.324694
- Collections: [geo-gse306288](/collections/md/2.md#geo-gse306288)
- Load: `Catalog().dataset("aljDkNJr1njeBJGE0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-jfs0wdufgeltwpao0000"></a>
## Human pancreas

- uid: `JFs0WdUFgELTWPaO0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-jfs0wdufgeltwpao0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,999
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452853
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("JFs0WdUFgELTWPaO0000").to_sdata()`


<a id="visium-spatial-gene-expression-synovial-membrane-of-synovial-joint-fxdduravo3w3z1g20000"></a>
## Human synovial membrane of synovial joint

- uid: `FxDDUraVO3W3z1g20000`
- Page: /datasets/visium-spatial-gene-expression-synovial-membrane-of-synovial-joint-fxdduravo3w3z1g20000/
- Technology: Visium
- Organism: human
- Tissue: synovial membrane of synovial joint
- Condition: rheumatoid arthritis
- Modality: RNA
- Observations (spots): 2,512
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347797
- Collections: [geo-gse347797](/collections/md/b.md#geo-gse347797)
- Load: `Catalog().dataset("FxDDUraVO3W3z1g20000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-ad0fnaw5y0sjbxhb0000"></a>
## Macaque colon

- uid: `aD0fnAW5Y0SJbXhb0000`
- Page: /datasets/visium-spatial-gene-expression-colon-ad0fnaw5y0sjbxhb0000/
- Technology: Visium
- Organism: macaque
- Tissue: colon
- Condition: simian immunodeficiency virus infection
- Modality: RNA
- Observations (spots): 3,012
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341607
- Publication: https://doi.org/10.3389/fimmu.2026.1862864
- Collections: [geo-gse341607](/collections/md/3.md#geo-gse341607)
- Load: `Catalog().dataset("aD0fnAW5Y0SJbXhb0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-element-sutivcmswyrzismv0000"></a>
## Human bone element

- uid: `sUTiVCmSwyrZIsmv0000`
- Page: /datasets/visium-spatial-gene-expression-bone-element-sutivcmswyrzismv0000/
- Technology: Visium
- Organism: human
- Tissue: bone element
- Condition: osteosarcoma
- Modality: RNA
- Observations (spots): 1,218
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293065
- Publication: https://doi.org/10.1038/s41467-026-74603-x
- Collections: [geo-gse293065](/collections/md/7.md#geo-gse293065)
- Load: `Catalog().dataset("sUTiVCmSwyrZIsmv0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-ertxinauxfq1n7zs0000"></a>
## Human pancreas

- uid: `ErTXinauxFQ1N7zs0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-ertxinauxfq1n7zs0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,064
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("ErTXinauxFQ1N7zs0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-2bjfngiraiyzkuqa0000"></a>
## Mouse kidney

- uid: `2BjfNGIrAIYZkuqa0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-2bjfngiraiyzkuqa0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Condition: acute kidney failure
- Modality: RNA
- Observations (spots): 1,598
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5543483
- Collections: [geo-gse182939](/collections/md/d.md#geo-gse182939)
- Load: `Catalog().dataset("2BjfNGIrAIYZkuqa0000").to_sdata()`


<a id="visium-spatial-gene-expression-right-coronary-artery-yq7r3zaweyxf9hli0000"></a>
## Pig right coronary artery

- uid: `yq7r3ZAwEYxF9hli0000`
- Page: /datasets/visium-spatial-gene-expression-right-coronary-artery-yq7r3zaweyxf9hli0000/
- Technology: Visium
- Organism: pig
- Tissue: right coronary artery
- Condition: coronary atherosclerosis
- Modality: RNA
- Observations (spots): 1,441
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6796866
- Collections: [geo-gse220218](/collections/md/c.md#geo-gse220218)
- Load: `Catalog().dataset("yq7r3ZAwEYxF9hli0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-4mmopdjqo0sugchq0000"></a>
## Mouse heart

- uid: `4mmOpdJqo0sUGCHq0000`
- Page: /datasets/visium-spatial-gene-expression-heart-4mmopdjqo0sugchq0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Modality: RNA
- Observations (spots): 2,223
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8806098
- Collections: [geo-gse290094](/collections/md/b.md#geo-gse290094)
- Load: `Catalog().dataset("4mmOpdJqo0sUGCHq0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-brain-orsx7qtndckxclma0000"></a>
## Mouse brain

- uid: `orsx7QtNdckxcLmA0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-brain-orsx7qtndckxclma0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: brain
- Modality: Metabolomics
- Observations: 52,800
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2017-06-30_07h26m26s
- Load: `Catalog().dataset("orsx7QtNdckxcLmA0000").to_sdata()`


<a id="mibi-tof-breast-o8xbndwhwond1a5o0000"></a>
## Human breast

- uid: `o8XBnDWhWoND1a5o0000`
- Page: /datasets/mibi-tof-breast-o8xbndwhwond1a5o0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,173
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("o8XBnDWhWoND1a5o0000").to_sdata()`


<a id="mibi-tof-breast-tpvlsykcrnq206au0000"></a>
## Human breast

- uid: `tpVLsYkcRnQ206AU0000`
- Page: /datasets/mibi-tof-breast-tpvlsykcrnq206au0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,930
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("tpVLsYkcRnQ206AU0000").to_sdata()`


<a id="vizgen-merscope-brain-aq0rfmhvo0fcrn8a0000"></a>
## Mouse brain

- uid: `AQ0rFmhVo0fcRn8a0000`
- Page: /datasets/vizgen-merscope-brain-aq0rfmhvo0fcrn8a0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 395,806
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280177
- Publication: https://doi.org/10.1038/s41467-025-63752-0
- Load: `Catalog().dataset("AQ0rFmhVo0fcRn8a0000").to_sdata()`


<a id="merfish-brain-5rdxkomouedd2qav0000"></a>
## Mouse brain

- uid: `5rDxkomoUedD2QAV0000`
- Page: /datasets/merfish-brain-5rdxkomouedd2qav0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 23,377
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("5rDxkomoUedD2QAV0000").to_sdata()`


<a id="mibi-tof-breast-jyw2gssqkubrnla80000"></a>
## Human breast

- uid: `JYw2GsSQkuBrNLa80000`
- Page: /datasets/mibi-tof-breast-jyw2gssqkubrnla80000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 7,037
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("JYw2GsSQkuBrNLa80000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-pdrqlfbvyny1yjd60000"></a>
## Human middle temporal gyrus

- uid: `PdrQLFbVYNy1yjD60000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-pdrqlfbvyny1yjd60000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 22,158
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("PdrQLFbVYNy1yjD60000").to_sdata()`


<a id="10x-xenium-bone-marrow-tn4lpojxcvopizb10000"></a>
## Human bone marrow

- uid: `tn4lpoJXCvopiZb10000`
- Page: /datasets/10x-xenium-bone-marrow-tn4lpojxcvopizb10000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (cells): 42,857
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299207
- Publication: https://doi.org/10.1182/blood.2025028896
- Load: `Catalog().dataset("tn4lpoJXCvopiZb10000").to_sdata()`