# SpatialData-DB datasets, shard 95

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-breast-y7l6g2vrksw8zkgx0000"></a>
## Human breast

- uid: `Y7L6G2vRKsw8ZKGx0000`
- Page: /datasets/visium-spatial-gene-expression-breast-y7l6g2vrksw8zkgx0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: breast neoplasm
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE289326
- Publication: https://doi.org/10.1158/1078-0432.ccr-25-4079
- Collections: [geo-gse289326](/collections/md/3.md#geo-gse289326)
- Load: `Catalog().dataset("Y7L6G2vRKsw8ZKGx0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-jukpq9jw4lxorc3w0000"></a>
## Human heart

- uid: `JUkpQ9Jw4LXOrC3w0000`
- Page: /datasets/visium-spatial-gene-expression-heart-jukpq9jw4lxorc3w0000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 2,177
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("JUkpQ9Jw4LXOrC3w0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-8qybjcfiuhckmjy30000"></a>
## Human brain

- uid: `8qYBJCfiuhckmjY30000`
- Page: /datasets/visium-spatial-gene-expression-brain-8qybjcfiuhckmjy30000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: embryonal tumor with multilayered rosettes
- Modality: RNA
- Observations (spots): 848
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE224477
- Publication: https://doi.org/10.1038/s41467-025-60442-9
- Collections: [geo-gse224477](/collections/md/1.md#geo-gse224477)
- Load: `Catalog().dataset("8qYBJCfiuhckmjY30000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-24sinqjlewgpmwtd0000"></a>
## Human liver

- uid: `24sINQJLEWgPMwtD0000`
- Page: /datasets/visium-spatial-gene-expression-liver-24sinqjlewgpmwtd0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: metabolic dysfunction-associated steatotic liver disease
- Modality: RNA
- Observations (spots): 3,738
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278621
- Publication: https://doi.org/10.1093/gigascience/giag074
- Load: `Catalog().dataset("24sINQJLEWgPMwtD0000").to_sdata()`


<a id="visium-spatial-gene-expression-thymus-wonoobycaex7art30000"></a>
## Human thymus

- uid: `WOnOoBYcaEx7art30000`
- Page: /datasets/visium-spatial-gene-expression-thymus-wonoobycaex7art30000/
- Technology: Visium
- Organism: human
- Tissue: thymus
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE207205
- Publication: https://doi.org/10.3389/fimmu.2022.1092028
- Collections: [geo-gse207205](/collections/md/6.md#geo-gse207205)
- Load: `Catalog().dataset("WOnOoBYcaEx7art30000").to_sdata()`


<a id="10x-xenium-kidney-pxwiwsetzbkmvrxp0000"></a>
## Human kidney

- uid: `PxwiWsETZbkmvrXp0000`
- Page: /datasets/10x-xenium-kidney-pxwiwsetzbkmvrxp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Modality: RNA
- Observations (cells): 288,214
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9428109
- Collections: [geo-gse315435](/collections/md/f.md#geo-gse315435)
- Load: `Catalog().dataset("PxwiWsETZbkmvrXp0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-f4jfyttsmjgv3rvz0000"></a>
## Mouse spleen

- uid: `f4JFyttSMJgv3rVZ0000`
- Page: /datasets/visium-spatial-gene-expression-spleen-f4jfyttsmjgv3rvz0000/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Condition: lymphocytic choriomeningitis
- Modality: RNA
- Observations (spots): 2,177
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE200720
- Publication: https://doi.org/10.1016/j.celrep.2022.111736
- Collections: [geo-gse200720](/collections/md/0.md#geo-gse200720)
- Load: `Catalog().dataset("f4JFyttSMJgv3rVZ0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-ecqledjilydgqaeq0000"></a>
## Human basal ganglion

- uid: `eCqlEdJiLYDGQaEq0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-ecqledjilydgqaeq0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 48,585
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("eCqlEdJiLYDGQaEq0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-element-b5ndyznf2w2gahkn0000"></a>
## Human bone element

- uid: `b5ndyZNF2W2gahKN0000`
- Page: /datasets/visium-spatial-gene-expression-bone-element-b5ndyznf2w2gahkn0000/
- Technology: Visium
- Organism: human
- Tissue: bone element
- Condition: osteosarcoma
- Modality: RNA
- Observations (spots): 1,190
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293065
- Publication: https://doi.org/10.1038/s41467-026-74603-x
- Collections: [geo-gse293065](/collections/md/7.md#geo-gse293065)
- Load: `Catalog().dataset("b5ndyZNF2W2gahKN0000").to_sdata()`


<a id="visium-spatial-gene-expression-stomach-rlqfmhjkbqnstnwd0000"></a>
## Human stomach

- uid: `rlqfMhJKBQnSTNwD0000`
- Page: /datasets/visium-spatial-gene-expression-stomach-rlqfmhjkbqnstnwd0000/
- Technology: Visium
- Organism: human
- Tissue: stomach
- Condition: gastrointestinal stromal tumor
- Modality: RNA
- Observations (spots): 2,624
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE203612
- Publication: https://doi.org/10.1038/s41588-022-01141-9
- Collections: [geo-gse203612](/collections/md/8.md#geo-gse203612)
- Load: `Catalog().dataset("rlqfMhJKBQnSTNwD0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ynh5lzuoyqtqdo8i0000"></a>
## Mouse brain

- uid: `yNH5lZuoYQtQDo8i0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ynh5lzuoyqtqdo8i0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,193
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313896
- Publication: https://doi.org/10.1016/j.cell.2026.03.013
- Collections: [geo-gse313896](/collections/md/f.md#geo-gse313896)
- Load: `Catalog().dataset("yNH5lZuoYQtQDo8i0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-fdlkflr3oxjccdhw0000"></a>
## Mouse heart

- uid: `FDlkflr3OXjccDhW0000`
- Page: /datasets/visium-spatial-gene-expression-heart-fdlkflr3oxjccdhw0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Modality: RNA
- Observations (spots): 1,256
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319842
- Publication: https://doi.org/10.1158/2767-9764.CRC-25-0511
- Collections: [geo-gse319842](/collections/md/8.md#geo-gse319842)
- Load: `Catalog().dataset("FDlkflr3OXjccDhW0000").to_sdata()`


<a id="visium-spatial-gene-expression-placenta-l7krnswr5kd865up0000"></a>
## Mouse placenta

- uid: `L7kRNSWR5kd865uP0000`
- Page: /datasets/visium-spatial-gene-expression-placenta-l7krnswr5kd865up0000/
- Technology: Visium
- Organism: mouse
- Tissue: placenta
- Modality: RNA
- Observations (spots): 1,961
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333401
- Publication: https://doi.org/10.64898/2026.07.11.732137
- Collections: [geo-gse333401](/collections/md/5.md#geo-gse333401)
- Load: `Catalog().dataset("L7kRNSWR5kd865uP0000").to_sdata()`


<a id="10x-xenium-submandibular-gland-wc9wadmukughut0t0000"></a>
## Mouse submandibular gland

- uid: `Wc9wAdMuKUghuT0t0000`
- Page: /datasets/10x-xenium-submandibular-gland-wc9wadmukughut0t0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: submandibular gland
- Modality: RNA
- Observations (cells): 131,054
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314531
- Publication: https://doi.org/10.1016/j.isci.2026.117494
- Load: `Catalog().dataset("Wc9wAdMuKUghuT0t0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-m4thazfnpqmrtg9q0000"></a>
## Human pancreas

- uid: `m4ThaZFNpQMRTg9q0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-m4thazfnpqmrtg9q0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,892
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452887
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("m4ThaZFNpQMRTg9q0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-havhoynzrunahkdk0000"></a>
## Human breast

- uid: `HAVHOyNzrUNahkdK0000`
- Page: /datasets/visium-spatial-gene-expression-breast-havhoynzrunahkdk0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: estrogen-receptor positive breast cancer
- Modality: RNA
- Observations (spots): 1,911
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298286
- Publication: https://doi.org/10.1158/0008-5472.CAN-25-3161
- Collections: [geo-gse298286](/collections/md/0.md#geo-gse298286)
- Load: `Catalog().dataset("HAVHOyNzrUNahkdK0000").to_sdata()`


<a id="visium-hd-adrenal-gland-ezvbxllunyzgpmsp0000"></a>
## Mouse adrenal gland

- uid: `EzVbXLlUnYZgpmSP0000`
- Page: /datasets/visium-hd-adrenal-gland-ezvbxllunyzgpmsp0000/
- Technology: Visium HD
- Organism: mouse
- Tissue: adrenal gland
- Modality: RNA
- Observations (bins): 550,841
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8874474
- Collections: [geo-gse293042](/collections/md/6.md#geo-gse293042)
- Load: `Catalog().dataset("EzVbXLlUnYZgpmSP0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-hz8omuadvlc7eqro0000"></a>
## Human breast

- uid: `Hz8omuadvlc7eQrO0000`
- Page: /datasets/visium-spatial-gene-expression-breast-hz8omuadvlc7eqro0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (spots): 757
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7777521
- Collections: [geo-gse243022](/collections/md/4.md#geo-gse243022)
- Load: `Catalog().dataset("Hz8omuadvlc7eQrO0000").to_sdata()`


<a id="10x-xenium-rectum-wtr8tccjafwlubkp0000"></a>
## Human rectum

- uid: `wTr8tCCjAfWlUbkP0000`
- Page: /datasets/10x-xenium-rectum-wtr8tccjafwlubkp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: rectum
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 32,860
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312420
- Publication: https://doi.org/10.1038/s41467-026-72482-w
- Load: `Catalog().dataset("wTr8tCCjAfWlUbkP0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-left-ventricle-jpmyppeayak7o1v00000"></a>
## Rat heart left ventricle

- uid: `JpmYpPeaYaK7o1v00000`
- Page: /datasets/visium-spatial-gene-expression-heart-left-ventricle-jpmyppeayak7o1v00000/
- Technology: Visium
- Organism: rat
- Tissue: heart left ventricle
- Condition: myocardial infarction
- Modality: RNA
- Observations (spots): 2,593
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8169585
- Collections: [geo-gse262430](/collections/md/7.md#geo-gse262430)
- Load: `Catalog().dataset("JpmYpPeaYaK7o1v00000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-jw01ns0wqscvbg5s0000"></a>
## Mouse entorhinal cortex

- uid: `JW01NS0wQSCvBG5S0000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-jw01ns0wqscvbg5s0000/
- Technology: Visium
- Organism: mouse
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 3,037
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347650
- Collections: [geo-gse347650](/collections/md/7.md#geo-gse347650)
- Load: `Catalog().dataset("JW01NS0wQSCvBG5S0000").to_sdata()`


<a id="visium-spatial-gene-expression-unknown-y4yodcvu0xtvwbrp0000"></a>
## Human unknown

- uid: `y4YodcVu0xTvWbrp0000`
- Page: /datasets/visium-spatial-gene-expression-unknown-y4yodcvu0xtvwbrp0000/
- Technology: Visium
- Organism: human
- Tissue: unknown
- Condition: diffuse large B-cell lymphoma
- Modality: RNA
- Observations (spots): 2,913
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9980516
- Collections: [geo-gse344506](/collections/md/1.md#geo-gse344506)
- Load: `Catalog().dataset("y4YodcVu0xTvWbrp0000").to_sdata()`


<a id="10x-xenium-lymph-node-evgqkhjbtq5cbieb0000"></a>
## Human lymph node

- uid: `eVgqkHJbtq5CBieB0000`
- Page: /datasets/10x-xenium-lymph-node-evgqkhjbtq5cbieb0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (cells): 144,744
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328422
- Load: `Catalog().dataset("eVgqkHJbtq5CBieB0000").to_sdata()`


<a id="merfish-brain-uucu7vpd3ckeclji0000"></a>
## Mouse brain

- uid: `UucU7VPd3CkeCLJI0000`
- Page: /datasets/merfish-brain-uucu7vpd3ckeclji0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 8,129
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("UucU7VPd3CkeCLJI0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-cx57s3m4tzmjcz080000"></a>
## Human kidney

- uid: `cX57s3M4tZmjcz080000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-cx57s3m4tzmjcz080000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 8,058
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-08-01_01h41m58s
- Load: `Catalog().dataset("cX57s3M4tZmjcz080000").to_sdata()`


<a id="vizgen-merscope-brain-q1pveggwxkuvolll0000"></a>
## Mouse brain

- uid: `Q1pveGgwxkUvoLlL0000`
- Page: /datasets/vizgen-merscope-brain-q1pveggwxkuvolll0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 9,020
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("Q1pveGgwxkUvoLlL0000").to_sdata()`


<a id="mibi-tof-breast-8zypbqpxs6l8ocii0000"></a>
## Human breast

- uid: `8zYpBqPxS6l8OCiI0000`
- Page: /datasets/mibi-tof-breast-8zypbqpxs6l8ocii0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,875
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("8zYpBqPxS6l8OCiI0000").to_sdata()`


<a id="vizgen-merscope-brain-wlootnk5dwxbuu8b0000"></a>
## Mouse brain

- uid: `WLoOTnK5dWXBUu8b0000`
- Page: /datasets/vizgen-merscope-brain-wlootnk5dwxbuu8b0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 212,162
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("WLoOTnK5dWXBUu8b0000").to_sdata()`


<a id="10x-xenium-pancreas-aglghy0xzzbthy940000"></a>
## Mouse pancreas

- uid: `AgLGHy0xZZbtHy940000`
- Page: /datasets/10x-xenium-pancreas-aglghy0xzzbthy940000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (cells): 285,151
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315243
- Publication: https://doi.org/10.1016/j.cell.2026.03.032
- Load: `Catalog().dataset("AgLGHy0xZZbtHy940000").to_sdata()`


<a id="10x-xenium-rectum-6vigby7esrnrvun30000"></a>
## Human rectum

- uid: `6VIGBY7EsRNrVuN30000`
- Page: /datasets/10x-xenium-rectum-6vigby7esrnrvun30000/
- Technology: 10x Xenium
- Organism: human
- Tissue: rectum
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 16,193
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("6VIGBY7EsRNrVuN30000").to_sdata()`


<a id="10x-xenium-common-carotid-artery-plus-branches-f0clidx4zsofmgn50000"></a>
## Human common carotid artery plus branches

- uid: `f0cLIDx4zsofmgN50000`
- Page: /datasets/10x-xenium-common-carotid-artery-plus-branches-f0clidx4zsofmgn50000/
- Technology: 10x Xenium
- Organism: human
- Tissue: common carotid artery plus branches
- Condition: atherosclerosis
- Modality: RNA
- Observations (cells): 48,629
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE294466
- Publication: https://doi.org/10.1038/s41467-025-67679-4
- Load: `Catalog().dataset("f0cLIDx4zsofmgN50000").to_sdata()`