# SpatialData-DB datasets, shard 8c

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="10x-xenium-lung-1roodv3jreyzgsdz0000"></a>
## Human lung

- uid: `1rooDV3jrEYzgsdz0000`
- Page: /datasets/10x-xenium-lung-1roodv3jreyzgsdz0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: lung cancer
- Modality: RNA
- Observations (cells): 150,365
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-lung-cancer-preview-data-xenium-human-multi-tissue-and-cancer-panel-1-standard
- Load: `Catalog().dataset("1rooDV3jrEYzgsdz0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-sy8sjhrva5ehz5ix0000"></a>
## Human intestine

- uid: `sY8sJhrva5EhZ5iX0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-sy8sjhrva5ehz5ix0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: rectum adenocarcinoma
- Modality: RNA
- Observations (spots): 1,691
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.biorxiv.org/content/10.1101/2023.01.23.525135v2
- Publication: https://doi.org/10.1101/2023.01.23.525135
- Collections: [doi-10-1101-2023-01-23-525135](/collections/md/f.md#doi-10-1101-2023-01-23-525135)
- Load: `Catalog().dataset("sY8sJhrva5EhZ5iX0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-dsqplk0nf838etay0000"></a>
## Mouse spinal cord

- uid: `dsQpLk0nF838eTay0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-dsqplk0nf838etay0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 266
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("dsQpLk0nF838eTay0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-hceq4gwlpcnnvlw00000"></a>
## Human heart

- uid: `hCeQ4GwlPcNNvlw00000`
- Page: /datasets/visium-spatial-gene-expression-heart-hceq4gwlpcnnvlw00000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 1,035
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("hCeQ4GwlPcNNvlw00000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-uyi1eookadmsgrqi0000"></a>
## Human liver

- uid: `uYI1eoOKaDmsgrQi0000`
- Page: /datasets/visium-spatial-gene-expression-liver-uyi1eookadmsgrqi0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243981
- Publication: https://doi.org/10.1016/j.jhep.2023.12.023
- Collections: [geo-gse240429](/collections/md/3.md#geo-gse240429)
- Load: `Catalog().dataset("uYI1eoOKaDmsgrQi0000").to_sdata()`


<a id="visium-spatial-gene-expression-plantaris-8wvdm7tgoj5ln3wo0000"></a>
## Mouse plantaris

- uid: `8wvdm7TgoJ5LN3Wo0000`
- Page: /datasets/visium-spatial-gene-expression-plantaris-8wvdm7tgoj5ln3wo0000/
- Technology: Visium
- Organism: mouse
- Tissue: plantaris
- Modality: RNA
- Observations (spots): 1,068
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE294765
- Publication: https://doi.org/10.1016/j.devcel.2026.03.010
- Collections: [geo-gse294765](/collections/md/7.md#geo-gse294765)
- Load: `Catalog().dataset("8wvdm7TgoJ5LN3Wo0000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-1qviqhcfleyumqz10000"></a>
## Human entorhinal cortex

- uid: `1qVIQhCflEyUmQz10000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-1qviqhcfleyumqz10000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("1qVIQhCflEyUmQz10000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-ytcbrgugobuu2e5s0000"></a>
## Macaque colon

- uid: `yTcBrGuGoBuU2E5S0000`
- Page: /datasets/visium-spatial-gene-expression-colon-ytcbrgugobuu2e5s0000/
- Technology: Visium
- Organism: macaque
- Tissue: colon
- Condition: simian immunodeficiency virus infection
- Modality: RNA
- Observations (spots): 2,872
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341607
- Publication: https://doi.org/10.3389/fimmu.2026.1862864
- Collections: [geo-gse341607](/collections/md/3.md#geo-gse341607)
- Load: `Catalog().dataset("yTcBrGuGoBuU2E5S0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-4m3rzp4achogihem0000"></a>
## Mouse brain

- uid: `4M3rZp4achoGihem0000`
- Page: /datasets/visium-spatial-gene-expression-brain-4m3rzp4achogihem0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,244
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313896
- Publication: https://doi.org/10.1016/j.cell.2026.03.013
- Collections: [geo-gse313896](/collections/md/f.md#geo-gse313896)
- Load: `Catalog().dataset("4M3rZp4achoGihem0000").to_sdata()`


<a id="visium-spatial-gene-expression-gastrocnemius-kguesih2ol9izlqs0000"></a>
## Mouse gastrocnemius

- uid: `KgueSiH2oL9iZlQs0000`
- Page: /datasets/visium-spatial-gene-expression-gastrocnemius-kguesih2ol9izlqs0000/
- Technology: Visium
- Organism: mouse
- Tissue: gastrocnemius
- Condition: Duchenne muscular dystrophy
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297388
- Publication: https://doi.org/10.1186/s13395-026-00429-2
- Collections: [geo-gse297388](/collections/md/7.md#geo-gse297388)
- Load: `Catalog().dataset("KgueSiH2oL9iZlQs0000").to_sdata()`


<a id="visium-spatial-gene-expression-amygdala-eyhzu3w9hs8m10wq0000"></a>
## Human amygdala

- uid: `eyHzU3w9hs8m10wq0000`
- Page: /datasets/visium-spatial-gene-expression-amygdala-eyhzu3w9hs8m10wq0000/
- Technology: Visium
- Organism: human
- Tissue: amygdala
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342709
- Collections: [geo-gse342709](/collections/md/a.md#geo-gse342709)
- Load: `Catalog().dataset("eyHzU3w9hs8m10wq0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-aalnizieh6zcvisr0000"></a>
## Human breast

- uid: `aALNiZieH6zcvISR0000`
- Page: /datasets/visium-spatial-gene-expression-breast-aalnizieh6zcvisr0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: ductal breast carcinoma in situ
- Modality: RNA
- Observations (spots): 2,773
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE348919
- Collections: [geo-gse348919](/collections/md/4.md#geo-gse348919)
- Load: `Catalog().dataset("aALNiZieH6zcvISR0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-xmdlhpcsfgdzqsgu0000"></a>
## Human pancreas

- uid: `xMdlhpcSfgDZQsGu0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-xmdlhpcsfgdzqsgu0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 4,216
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("xMdlhpcSfgDZQsGu0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-3rcaczb7bncrsen10000"></a>
## Rat brain

- uid: `3RCaCzB7bNCrSEn10000`
- Page: /datasets/visium-spatial-gene-expression-brain-3rcaczb7bncrsen10000/
- Technology: Visium
- Organism: rat
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,162
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301260
- Publication: https://doi.org/10.1186/s40478-026-02224-y
- Collections: [geo-gse301260](/collections/md/f.md#geo-gse301260)
- Load: `Catalog().dataset("3RCaCzB7bNCrSEn10000").to_sdata()`


<a id="10x-xenium-larynx-7r831qk5ez2wfhed0000"></a>
## Human larynx

- uid: `7R831Qk5Ez2WFHEd0000`
- Page: /datasets/10x-xenium-larynx-7r831qk5ez2wfhed0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: larynx
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (cells): 6,826
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE324934
- Publication: https://doi.org/10.1186/s12916-026-04883-z
- Load: `Catalog().dataset("7R831Qk5Ez2WFHEd0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-mjdjihbea4v23cvc0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `mjdJiHBEa4V23cVc0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-mjdjihbea4v23cvc0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("mjdJiHBEa4V23cVc0000").to_sdata()`


<a id="visium-spatial-gene-expression-anterior-cingulate-cortex-3wld9ttdkartgxfg0000"></a>
## Human anterior cingulate cortex

- uid: `3Wld9TtdkARtGxFg0000`
- Page: /datasets/visium-spatial-gene-expression-anterior-cingulate-cortex-3wld9ttdkartgxfg0000/
- Technology: Visium
- Organism: human
- Tissue: anterior cingulate cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296789
- Publication: https://doi.org/10.1016/j.celrep.2026.117500
- Collections: [geo-gse296789](/collections/md/0.md#geo-gse296789)
- Load: `Catalog().dataset("3Wld9TtdkARtGxFg0000").to_sdata()`


<a id="merfish-brain-3gsmdumpzkqudsel0000"></a>
## Mouse brain

- uid: `3GSMdumPZKquDseL0000`
- Page: /datasets/merfish-brain-3gsmdumpzkqudsel0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 23,905
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("3GSMdumPZKquDseL0000").to_sdata()`


<a id="merfish-brain-zimvlo4wlv8hhvuu0000"></a>
## Mouse brain

- uid: `ZiMvlo4wlv8HHVuU0000`
- Page: /datasets/merfish-brain-zimvlo4wlv8hhvuu0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 24,776
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("ZiMvlo4wlv8HHVuU0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-dp4wbd1fheaaxh7n0000"></a>
## Human kidney

- uid: `DP4WBd1FheAAxH7n0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-dp4wbd1fheaaxh7n0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 11,288
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-02-28_21h25m15s
- Load: `Catalog().dataset("DP4WBd1FheAAxH7n0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-colon-s4oyb6v39zto4nha0000"></a>
## Mouse colon

- uid: `S4OYB6V39ZTo4Nha0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-colon-s4oyb6v39zto4nha0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: colon
- Condition: malignant colon neoplasm
- Modality: Metabolomics
- Observations: 51,436
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2025-01-17_11h10m04s
- Publication: https://doi.org/10.1126/science.adw8520
- Load: `Catalog().dataset("S4OYB6V39ZTo4Nha0000").to_sdata()`


<a id="mibi-tof-breast-lc0liahm5ziab0qz0000"></a>
## Human breast

- uid: `lc0liaHm5zIAb0Qz0000`
- Page: /datasets/mibi-tof-breast-lc0liahm5ziab0qz0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,907
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("lc0liaHm5zIAb0Qz0000").to_sdata()`


<a id="stereo-seq-prefrontal-cortex-morarrr4iwqzlxxn0000"></a>
## Human prefrontal cortex

- uid: `MorARRr4IWqZlXXn0000`
- Page: /datasets/stereo-seq-prefrontal-cortex-morarrr4iwqzlxxn0000/
- Technology: Stereo-seq
- Organism: human
- Tissue: prefrontal cortex
- Condition: Alzheimer disease
- Modality: RNA
- Observations: 80,183
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269906
- Collections: [geo-gse269906](/collections/md/5.md#geo-gse269906)
- Load: `Catalog().dataset("MorARRr4IWqZlXXn0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-mtdrcp515g3d7umj0000"></a>
## Human kidney

- uid: `mtDrcP515G3d7UMJ0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-mtdrcp515g3d7umj0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 2,912
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2018-09-12_09h28m04s
- Load: `Catalog().dataset("mtDrcP515G3d7UMJ0000").to_sdata()`


<a id="mibi-tof-brain-3r6u75bdwrwyys9o0000"></a>
## Human brain

- uid: `3r6u75bdwRwYYs9O0000`
- Page: /datasets/mibi-tof-brain-3r6u75bdwrwyys9o0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: protein
- Observations: 392
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1579
- Collections: [bia-s-biad1579](/collections/md/2.md#bia-s-biad1579)
- Load: `Catalog().dataset("3r6u75bdwRwYYs9O0000").to_sdata()`


<a id="10x-xenium-pancreas-hykv5bc8q02slunp0000"></a>
## Mouse pancreas

- uid: `hykv5Bc8Q02SLuNp0000`
- Page: /datasets/10x-xenium-pancreas-hykv5bc8q02slunp0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (cells): 203,952
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341984
- Load: `Catalog().dataset("hykv5Bc8Q02SLuNp0000").to_sdata()`