# SpatialData-DB datasets, shard 83

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-lung-psux2yt4wfcu9cl70000"></a>
## Human lung

- uid: `pSUx2YT4WFcu9cL70000`
- Page: /datasets/visium-hd-lung-psux2yt4wfcu9cl70000/
- Technology: Visium HD
- Organism: human
- Tissue: lung
- Condition: lung cancer
- Modality: RNA
- Observations (bins): 617,107
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-human-lung-cancer-fixed-frozen
- Load: `Catalog().dataset("pSUx2YT4WFcu9cL70000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-lekacjiqo6g46vsd0000"></a>
## Human breast

- uid: `LEkACjiQo6G46VsD0000`
- Page: /datasets/visium-spatial-gene-expression-breast-lekacjiqo6g46vsd0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: breast neoplasm
- Modality: RNA
- Observations (spots): 2,256
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE289326
- Publication: https://doi.org/10.1158/1078-0432.ccr-25-4079
- Collections: [geo-gse289326](/collections/md/3.md#geo-gse289326)
- Load: `Catalog().dataset("LEkACjiQo6G46VsD0000").to_sdata()`


<a id="spatial-transcriptomics-breast-fcssss0no79nk2bo0000"></a>
## Human breast

- uid: `fcSsSs0NO79nK2Bo0000`
- Page: /datasets/spatial-transcriptomics-breast-fcssss0no79nk2bo0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 695
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("fcSsSs0NO79nK2Bo0000").to_sdata()`


<a id="spatial-transcriptomics-brain-poah2ffcobviyssu0000"></a>
## Mouse brain

- uid: `PoaH2ffCObviYSsU0000`
- Page: /datasets/spatial-transcriptomics-brain-poah2ffcobviyssu0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 237
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("PoaH2ffCObviYSsU0000").to_sdata()`


<a id="10x-xenium-brain-zkcoc91rskq0hkrb0000"></a>
## Mouse brain

- uid: `zkcoC91rSKQ0HkRb0000`
- Page: /datasets/10x-xenium-brain-zkcoc91rskq0hkrb0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Condition: demyelinating disease of central nervous system
- Modality: RNA
- Observations (cells): 127,215
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8253806
- Publication: https://doi.org/10.1016/j.celrep.2024.115194
- Collections: [geo-gse266689](/collections/md/6.md#geo-gse266689)
- Load: `Catalog().dataset("zkcoC91rSKQ0HkRb0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-puq0jrq4lazh73eq0000"></a>
## Human ovary

- uid: `puq0jrq4lazH73eQ0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-puq0jrq4lazh73eq0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian squamous cell carcinoma
- Modality: RNA
- Observations (spots): 869
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE272833
- Publication: https://doi.org/10.1111/cas.70022
- Collections: [geo-gse272833](/collections/md/4.md#geo-gse272833)
- Load: `Catalog().dataset("puq0jrq4lazH73eQ0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-marrow-k0ymwzqlt8bv2zoj0000"></a>
## Human bone marrow

- uid: `K0YmwZQLT8bv2zoj0000`
- Page: /datasets/visium-spatial-gene-expression-bone-marrow-k0ymwzqlt8bv2zoj0000/
- Technology: Visium
- Organism: human
- Tissue: bone marrow
- Modality: RNA
- Observations (spots): 1,254
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269875
- Publication: https://doi.org/10.1111/acel.70475
- Collections: [geo-gse269875](/collections/md/4.md#geo-gse269875)
- Load: `Catalog().dataset("K0YmwZQLT8bv2zoj0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-knheosxvz6jxqsmv0000"></a>
## Mouse brain

- uid: `KnHEoSxvz6JxQSmv0000`
- Page: /datasets/visium-spatial-gene-expression-brain-knheosxvz6jxqsmv0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,344
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282203
- Publication: https://doi.org/10.64898/2026.01.26.701799
- Collections: [geo-gse282203](/collections/md/3.md#geo-gse282203)
- Load: `Catalog().dataset("KnHEoSxvz6JxQSmv0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-opug41ncpaorkzyg0000"></a>
## Human liver

- uid: `OPuG41NCPaORKZYg0000`
- Page: /datasets/visium-spatial-gene-expression-liver-opug41ncpaorkzyg0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: colorectal cancer
- Modality: RNA
- Observations (spots): 3,070
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE254364
- Publication: https://doi.org/10.1158/2326-6066.CIR-22-0462
- Collections: [geo-gse254364](/collections/md/6.md#geo-gse254364)
- Load: `Catalog().dataset("OPuG41NCPaORKZYg0000").to_sdata()`


<a id="visium-spatial-gene-expression-ilium-mpwpojffpcygswdm0000"></a>
## Human ilium

- uid: `MPwpojFFpCygSwdm0000`
- Page: /datasets/visium-spatial-gene-expression-ilium-mpwpojffpcygswdm0000/
- Technology: Visium
- Organism: human
- Tissue: ilium
- Modality: RNA
- Observations (spots): 1,007
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281317
- Publication: https://doi.org/10.1038/s41586-025-09399-9
- Collections: [geo-gse281317](/collections/md/6.md#geo-gse281317)
- Load: `Catalog().dataset("MPwpojFFpCygSwdm0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-0877bxvk1afupod90000"></a>
## Human pancreas

- uid: `0877Bxvk1AFUpoD90000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-0877bxvk1afupod90000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,261
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("0877Bxvk1AFUpoD90000").to_sdata()`


<a id="visium-spatial-gene-expression-brainstem-zqjeynxhbsymjq1s0000"></a>
## Rat brainstem

- uid: `ZqJEYNxHBSymjQ1s0000`
- Page: /datasets/visium-spatial-gene-expression-brainstem-zqjeynxhbsymjq1s0000/
- Technology: Visium
- Organism: rat
- Tissue: brainstem
- Modality: RNA
- Observations (spots): 2,182
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260847
- Publication: https://doi.org/10.1016/j.isci.2024.110549
- Collections: [geo-gse260847](/collections/md/4.md#geo-gse260847)
- Load: `Catalog().dataset("ZqJEYNxHBSymjQ1s0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-oyfhjdz8h3dhc8ef0000"></a>
## Macaque colon

- uid: `OyFhjDz8h3DHc8EF0000`
- Page: /datasets/visium-spatial-gene-expression-colon-oyfhjdz8h3dhc8ef0000/
- Technology: Visium
- Organism: macaque
- Tissue: colon
- Condition: simian immunodeficiency virus infection
- Modality: RNA
- Observations (spots): 2,988
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341607
- Publication: https://doi.org/10.3389/fimmu.2026.1862864
- Collections: [geo-gse341607](/collections/md/3.md#geo-gse341607)
- Load: `Catalog().dataset("OyFhjDz8h3DHc8EF0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-el61swc4mbtginj20001"></a>
## Human liver

- uid: `El61sWC4mbTGiNj20001`
- Page: /datasets/visium-spatial-gene-expression-liver-el61swc4mbtginj20001/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: biliary atresia
- Modality: RNA
- Observations (spots): 1,537
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE338525
- Publication: https://doi.org/10.1097/HC9.0000000000000992
- Collections: [geo-gse338525](/collections/md/1.md#geo-gse338525)
- Load: `Catalog().dataset("El61sWC4mbTGiNj20001").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-1haj9pifzeahfpvn0000"></a>
## Human skin of body

- uid: `1Haj9pIFZeaHFPvN0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-1haj9pifzeahfpvn0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: hidradenitis suppurativa
- Modality: RNA
- Observations (spots): 14,335
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE346090
- Collections: [geo-gse346090](/collections/md/a.md#geo-gse346090)
- Load: `Catalog().dataset("1Haj9pIFZeaHFPvN0000").to_sdata()`


<a id="visium-spatial-gene-expression-long-bone-j43mww29hgggfyqt0000"></a>
## Mouse long bone

- uid: `J43mWW29hgGGFyqt0000`
- Page: /datasets/visium-spatial-gene-expression-long-bone-j43mww29hgggfyqt0000/
- Technology: Visium
- Organism: mouse
- Tissue: long bone
- Modality: RNA
- Observations (spots): 2,031
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE338404
- Publication: https://doi.org/10.1126/sciadv.adx7511
- Collections: [geo-gse338404](/collections/md/1.md#geo-gse338404)
- Load: `Catalog().dataset("J43mWW29hgGGFyqt0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-qbmivzta1undi7jo0000"></a>
## Human breast

- uid: `qBMIVZTa1UNDI7jo0000`
- Page: /datasets/visium-spatial-gene-expression-breast-qbmivzta1undi7jo0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: estrogen-receptor positive breast cancer
- Modality: RNA
- Observations (spots): 4,651
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298286
- Publication: https://doi.org/10.1158/0008-5472.CAN-25-3161
- Collections: [geo-gse298286](/collections/md/0.md#geo-gse298286)
- Load: `Catalog().dataset("qBMIVZTa1UNDI7jo0000").to_sdata()`


<a id="10x-xenium-tongue-wotjyv3bu2fud60a0000"></a>
## Mouse tongue

- uid: `wOTjyv3bu2fUd60a0000`
- Page: /datasets/10x-xenium-tongue-wotjyv3bu2fud60a0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: tongue
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (cells): 75,178
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302128
- Publication: https://doi.org/10.1038/s41416-025-03189-w
- Load: `Catalog().dataset("wOTjyv3bu2fUd60a0000").to_sdata()`


<a id="10x-xenium-skin-of-body-wlomxqwwlqx0ndds0000"></a>
## Mouse skin of body

- uid: `WLomxQwwLQx0nDDS0000`
- Page: /datasets/10x-xenium-skin-of-body-wlomxqwwlqx0ndds0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: skin of body
- Condition: basal cell carcinoma
- Modality: RNA
- Observations (cells): 120,819
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320484
- Load: `Catalog().dataset("WLomxQwwLQx0nDDS0000").to_sdata()`


<a id="visium-spatial-gene-expression-hypothalamus-vp1ttikezyqmycbg0000"></a>
## Human hypothalamus

- uid: `VP1TtiKeZYQmYCBg0000`
- Page: /datasets/visium-spatial-gene-expression-hypothalamus-vp1ttikezyqmycbg0000/
- Technology: Visium
- Organism: human
- Tissue: hypothalamus
- Modality: RNA
- Observations (spots): 4,977
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280316
- Collections: [geo-gse280316](/collections/md/5.md#geo-gse280316)
- Load: `Catalog().dataset("VP1TtiKeZYQmYCBg0000").to_sdata()`


<a id="10x-xenium-pleura-eakcvgg53h0imi5q0000"></a>
## Human pleura

- uid: `EakcvGG53h0iMI5Q0000`
- Page: /datasets/10x-xenium-pleura-eakcvgg53h0imi5q0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: pleura
- Condition: pleural mesothelioma
- Modality: RNA
- Observations (cells): 57,823
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327347
- Publication: https://doi.org/10.1016/j.jtho.2025.11.019
- Load: `Catalog().dataset("EakcvGG53h0iMI5Q0000").to_sdata()`


<a id="vizgen-merscope-brain-vtzhjkw4pnwnoaxl0000"></a>
## Mouse brain

- uid: `VTZHJkw4pnWnOAXL0000`
- Page: /datasets/vizgen-merscope-brain-vtzhjkw4pnwnoaxl0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 10,087
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("VTZHJkw4pnWnOAXL0000").to_sdata()`


<a id="10x-xenium-heart-dds49bhpy4wvvzax0000"></a>
## Human heart

- uid: `dDS49bhpy4WVvzax0000`
- Page: /datasets/10x-xenium-heart-dds49bhpy4wvvzax0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: heart
- Condition: heart failure
- Modality: RNA
- Observations (cells): 25,198
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310386
- Load: `Catalog().dataset("dDS49bhpy4WVvzax0000").to_sdata()`


<a id="vizgen-merscope-brain-hgvc7yqicsmu1dy60000"></a>
## Mouse brain

- uid: `hgVC7YqicSmU1dY60000`
- Page: /datasets/vizgen-merscope-brain-hgvc7yqicsmu1dy60000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 82,584
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("hgVC7YqicSmU1dY60000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-placenta-myxclruaiwvqqthl0000"></a>
## Human placenta

- uid: `MYXcLrUaiwvQQThl0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-placenta-myxclruaiwvqqthl0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: placenta
- Modality: Metabolomics
- Observations: 34,404
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2024-02-26_22h36m04s
- Load: `Catalog().dataset("MYXcLrUaiwvQQThl0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-pm4husuueeillkok0000"></a>
## Human kidney

- uid: `pM4HusuuEEilLKoK0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-pm4husuueeillkok0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 1,610
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-08-01_01h35m23s
- Load: `Catalog().dataset("pM4HusuuEEilLKoK0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-iowni6go7xgkdttk0000"></a>
## Human kidney

- uid: `iOWNi6gO7xGKDTTK0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-iowni6go7xgkdttk0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 3,150
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-01-31_23h06m10s
- Load: `Catalog().dataset("iOWNi6gO7xGKDTTK0000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-gzx1bxegnjnlmjqr0000"></a>
## Human middle temporal gyrus

- uid: `gZX1BXeGnjNlmJqR0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-gzx1bxegnjnlmjqr0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 9,483
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("gZX1BXeGnjNlmJqR0000").to_sdata()`


<a id="mibi-tof-breast-bf2lrnqin0ygjvfb0000"></a>
## Human breast

- uid: `BF2LrNQIn0ygjVFB0000`
- Page: /datasets/mibi-tof-breast-bf2lrnqin0ygjvfb0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,231
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("BF2LrNQIn0ygjVFB0000").to_sdata()`