# SpatialData-DB datasets, shard 7a

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-uccykrpnv88ffdwr0000"></a>
## Human brain

- uid: `uCCYkrPnv88ffdWr0000`
- Page: /datasets/visium-spatial-gene-expression-brain-uccykrpnv88ffdwr0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 4,501
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE276841
- Publication: https://doi.org/10.1126/science.abm5214
- Collections: [geo-gse276841](/collections/md/b.md#geo-gse276841)
- Load: `Catalog().dataset("uCCYkrPnv88ffdWr0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-tcfxnqyxxzjl9vzb0000"></a>
## Mouse liver

- uid: `tcfxNQYxXZjl9VZb0000`
- Page: /datasets/visium-spatial-gene-expression-liver-tcfxnqyxxzjl9vzb0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: liver and intrahepatic bile duct neoplasm
- Modality: RNA
- Observations (spots): 4,970
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297081
- Publication: https://doi.org/10.1038/s41586-025-09297-0
- Collections: [geo-gse297081](/collections/md/4.md#geo-gse297081)
- Load: `Catalog().dataset("tcfxNQYxXZjl9VZb0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-rruveabzyhxlx5dx0000"></a>
## Mouse spinal cord

- uid: `RrUVEAbzYhxlx5Dx0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-rruveabzyhxlx5dx0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 320
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("RrUVEAbzYhxlx5Dx0000").to_sdata()`


<a id="spatial-transcriptomics-brain-zduyvdby0pkfkv0k0000"></a>
## Mouse brain

- uid: `ZDUyVdBY0PkfKv0K0000`
- Page: /datasets/spatial-transcriptomics-brain-zduyvdby0pkfkv0k0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 577
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("ZDUyVdBY0PkfKv0K0000").to_sdata()`


<a id="spatial-transcriptomics-breast-vwg7nkhryt7vcygl0000"></a>
## Human breast

- uid: `Vwg7NKHrYt7vCYgl0000`
- Page: /datasets/spatial-transcriptomics-breast-vwg7nkhryt7vcygl0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 441
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("Vwg7NKHrYt7vCYgl0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-8taluto6riakji5t0000"></a>
## Mouse spinal cord

- uid: `8TaLuto6riAKji5t0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-8taluto6riakji5t0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 99
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("8TaLuto6riAKji5t0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-oxvj8ubxluu8njfk0000"></a>
## Human prostate gland

- uid: `oxvJ8UBxLUu8njFk0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-oxvj8ubxluu8njfk0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostatic acinar adenocarcinoma
- Modality: RNA
- Observations (spots): 1,751
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05023-2
- Publication: https://doi.org/10.1038/s41586-022-05023-2
- Collections: [doi-10-1038-s41586-022-05023-2](/collections/md/5.md#doi-10-1038-s41586-022-05023-2)
- Load: `Catalog().dataset("oxvJ8UBxLUu8njFk0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-g2dau41bre59e2gd0000"></a>
## Human prostate gland

- uid: `G2Dau41bre59E2Gd0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-g2dau41bre59e2gd0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE230282
- Publication: https://doi.org/10.3390/ijms24108955
- Load: `Catalog().dataset("G2Dau41bre59E2Gd0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-aiuybdzibujlxz2e0000"></a>
## Mouse brain

- uid: `aIuYBdziBUjlXz2E0000`
- Page: /datasets/visium-spatial-gene-expression-brain-aiuybdzibujlxz2e0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,913
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE232910
- Publication: https://doi.org/10.1038/s41587-023-01937-y
- Collections: [geo-gse232910](/collections/md/0.md#geo-gse232910)
- Load: `Catalog().dataset("aIuYBdziBUjlXz2E0000").to_sdata()`


<a id="phenocycler-fusion-tonsil-frzjqc459f4cdz200000"></a>
## Human tonsil

- uid: `frZJqc459F4cdz200000`
- Page: /datasets/phenocycler-fusion-tonsil-frzjqc459f4cdz200000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: tonsil
- Modality: protein
- Observations (cells): 289,534
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2491
- Collections: [bia-s-biad2491](/collections/md/4.md#bia-s-biad2491)
- Load: `Catalog().dataset("frZJqc459F4cdz200000").to_sdata()`


<a id="visium-spatial-gene-expression-popliteal-lymph-node-d4kqpoemmsutzod20000"></a>
## Mouse popliteal lymph node

- uid: `D4KQPoEMmSutZod20000`
- Page: /datasets/visium-spatial-gene-expression-popliteal-lymph-node-d4kqpoemmsutzod20000/
- Technology: Visium
- Organism: mouse
- Tissue: popliteal lymph node
- Condition: rheumatoid arthritis
- Modality: RNA
- Observations (spots): 2,015
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE195598
- Publication: https://doi.org/10.3389/fimmu.2023.1237498
- Collections: [geo-gse195598](/collections/md/4.md#geo-gse195598)
- Load: `Catalog().dataset("D4KQPoEMmSutZod20000").to_sdata()`


<a id="visium-spatial-gene-expression-locus-ceruleus-wicqryqgp1i4t8ts0000"></a>
## Human locus ceruleus

- uid: `wicQRYQgp1i4T8Ts0000`
- Page: /datasets/visium-spatial-gene-expression-locus-ceruleus-wicqryqgp1i4t8ts0000/
- Technology: Visium
- Organism: human
- Tissue: locus ceruleus
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307866
- Publication: https://doi.org/10.1101/2025.10.29.685354
- Collections: [geo-gse307866](/collections/md/9.md#geo-gse307866)
- Load: `Catalog().dataset("wicQRYQgp1i4T8Ts0000").to_sdata()`


<a id="visium-spatial-gene-expression-coronary-artery-crnvyt0muqlvk4sj0000"></a>
## Human coronary artery

- uid: `crNvYt0MUqlvk4sJ0000`
- Page: /datasets/visium-spatial-gene-expression-coronary-artery-crnvyt0muqlvk4sj0000/
- Technology: Visium
- Organism: human
- Tissue: coronary artery
- Condition: atherosclerosis
- Modality: RNA
- Observations (spots): 889
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314851
- Publication: https://doi.org/10.1126/science.adx1736
- Collections: [geo-gse314851](/collections/md/d.md#geo-gse314851)
- Load: `Catalog().dataset("crNvYt0MUqlvk4sJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-olfactory-bulb-6z4xmh7fb4xa6ozv0000"></a>
## Mouse olfactory bulb

- uid: `6Z4Xmh7Fb4XA6OZv0000`
- Page: /datasets/visium-spatial-gene-expression-olfactory-bulb-6z4xmh7fb4xa6ozv0000/
- Technology: Visium
- Organism: mouse
- Tissue: olfactory bulb
- Modality: RNA
- Observations (spots): 364
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("6Z4Xmh7Fb4XA6OZv0000").to_sdata()`


<a id="10x-xenium-heart-left-ventricle-xvmrmiglwjbz0qzq0000"></a>
## Mouse heart left ventricle

- uid: `xVmrmiGLWJbZ0qzQ0000`
- Page: /datasets/10x-xenium-heart-left-ventricle-xvmrmiglwjbz0qzq0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: heart left ventricle
- Condition: heart disorder
- Modality: RNA
- Observations (cells): 35,946
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280376
- Publication: https://doi.org/10.1038/s44161-025-00739-6
- Collections: [geo-gse280376](/collections/md/c.md#geo-gse280376)
- Load: `Catalog().dataset("xVmrmiGLWJbZ0qzQ0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-jxugg9ucr4bvf8xa0000"></a>
## Mouse liver

- uid: `JXugg9ucr4bVf8Xa0000`
- Page: /datasets/visium-spatial-gene-expression-liver-jxugg9ucr4bvf8xa0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 1,168
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE236424
- Collections: [geo-gse236424](/collections/md/3.md#geo-gse236424)
- Load: `Catalog().dataset("JXugg9ucr4bVf8Xa0000").to_sdata()`


<a id="visium-spatial-gene-expression-forelimb-zeugopod-yjcfyri37uwzwi1m0000"></a>
## Ambystoma mexicanum forelimb zeugopod

- uid: `YjCFyri37UWZwI1M0000`
- Page: /datasets/visium-spatial-gene-expression-forelimb-zeugopod-yjcfyri37uwzwi1m0000/
- Technology: Visium
- Organism: ambystoma mexicanum
- Tissue: forelimb zeugopod
- Modality: RNA
- Observations (spots): 1,192
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7781044
- Load: `Catalog().dataset("YjCFyri37UWZwI1M0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-liver-ea5lvcuslx1cxfoz0000"></a>
## Mouse liver

- uid: `Ea5LvCUslX1cXfOZ0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-liver-ea5lvcuslx1cxfoz0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: liver
- Modality: Metabolomics
- Observations: 10,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-03-28_11h56m06s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("Ea5LvCUslX1cXfOZ0000").to_sdata()`


<a id="vizgen-merscope-barrel-cortex-21ihupjnqtwbzm1s0000"></a>
## Mouse barrel cortex

- uid: `21iHUPJnQTwBzM1s0000`
- Page: /datasets/vizgen-merscope-barrel-cortex-21ihupjnqtwbzm1s0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: barrel cortex
- Modality: RNA
- Observations (cells): 211,398
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298314
- Publication: https://doi.org/10.1016/j.cell.2025.08.023
- Collections: [geo-gse298314](/collections/md/b.md#geo-gse298314)
- Load: `Catalog().dataset("21iHUPJnQTwBzM1s0000").to_sdata()`


<a id="mibi-tof-skin-of-body-zxotawihubc7vwrd0000"></a>
## Human skin of body

- uid: `zxotAwIhuBc7VwrD0000`
- Page: /datasets/mibi-tof-skin-of-body-zxotawihubc7vwrd0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: skin of body
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 203
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("zxotAwIhuBc7VwrD0000").to_sdata()`


<a id="mibi-tof-breast-xfbwffpbxycxte450000"></a>
## Human breast

- uid: `xfbWFFPBXYcxtE450000`
- Page: /datasets/mibi-tof-breast-xfbwffpbxycxte450000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,383
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("xfbWFFPBXYcxtE450000").to_sdata()`


<a id="mibi-tof-lymph-node-6luzfygl5k60twbp0000"></a>
## Human lymph node

- uid: `6luzFyGl5K60twBP0000`
- Page: /datasets/mibi-tof-lymph-node-6luzfygl5k60twbp0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,229
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("6luzFyGl5K60twBP0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-knocy5umg8yb4bde0000"></a>
## Human kidney

- uid: `knocY5UmG8YB4BDe0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-knocy5umg8yb4bde0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 22,261
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-09-12_00h37m23s
- Load: `Catalog().dataset("knocY5UmG8YB4BDe0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-tlhb030qmzacja9l0000"></a>
## Human lymph node

- uid: `TlHb030QmzAcja9L0000`
- Page: /datasets/phenocycler-fusion-lymph-node-tlhb030qmzacja9l0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 20,932
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("TlHb030QmzAcja9L0000").to_sdata()`


<a id="10x-xenium-brain-b4kh6nnqiohcwgsw0000"></a>
## Mouse brain

- uid: `B4kh6nNQiOHcWGSw0000`
- Page: /datasets/10x-xenium-brain-b4kh6nnqiohcwgsw0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 109,767
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337270
- Load: `Catalog().dataset("B4kh6nNQiOHcWGSw0000").to_sdata()`


<a id="merfish-brain-8hmssxut5fkd5al30000"></a>
## Mouse brain

- uid: `8HMSsXUT5fKD5AL30000`
- Page: /datasets/merfish-brain-8hmssxut5fkd5al30000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 23,444
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("8HMSsXUT5fKD5AL30000").to_sdata()`