# SpatialData-DB datasets, shard 79

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="spatial-transcriptomics-spinal-cord-zlcnhhmlmtdnmvdk0000"></a>
## Mouse spinal cord

- uid: `ZLCnhhmlmtDnmvdk0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-zlcnhhmlmtdnmvdk0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 341
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("ZLCnhhmlmtDnmvdk0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-jup9squls1saqs9w0000"></a>
## Mouse spinal cord

- uid: `juP9squls1SAQS9W0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-jup9squls1saqs9w0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 372
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("juP9squls1SAQS9W0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-yl0e3r7l9tec5zrr0000"></a>
## Mouse brain

- uid: `Yl0E3R7l9TEC5ZRR0000`
- Page: /datasets/visium-spatial-gene-expression-brain-yl0e3r7l9tec5zrr0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,541
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://zenodo.org/records/10520022
- Publication: https://doi.org/10.5281/zenodo.10520022
- Collections: [doi-10-5281-zenodo-10520022](/collections/md/2.md#doi-10-5281-zenodo-10520022)
- Load: `Catalog().dataset("Yl0E3R7l9TEC5ZRR0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-ve4rab7tkmho1zry0000"></a>
## Human lung

- uid: `ve4RAB7TKMho1zRY0000`
- Page: /datasets/visium-spatial-gene-expression-lung-ve4rab7tkmho1zry0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 1,768
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41588-022-01243-4
- Publication: https://doi.org/10.1038/s41588-022-01243-4
- Collections: [doi-10-1038-s41588-022-01243-4](/collections/md/9.md#doi-10-1038-s41588-022-01243-4)
- Load: `Catalog().dataset("ve4RAB7TKMho1zRY0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-uxjvkqzugu7zjhas0000"></a>
## Human brain

- uid: `uXJvkqZuGU7zjhaS0000`
- Page: /datasets/visium-spatial-gene-expression-brain-uxjvkqzugu7zjhas0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,110
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41593-020-00787-0#data-availability
- Publication: https://doi.org/10.1038/s41593-020-00787-0
- Collections: [doi-10-1038-s41593-020-00787-0](/collections/md/3.md#doi-10-1038-s41593-020-00787-0)
- Load: `Catalog().dataset("uXJvkqZuGU7zjhaS0000").to_sdata()`


<a id="10x-xenium-brain-a2sdchwafb0dcaed0000"></a>
## Mouse brain

- uid: `A2SdCHwafB0Dcaed0000`
- Page: /datasets/10x-xenium-brain-a2sdchwafb0dcaed0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 83,672
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9489192
- Publication: https://doi.org/10.1016/j.stemcr.2026.102967
- Collections: [geo-gse318202](/collections/md/3.md#geo-gse318202)
- Load: `Catalog().dataset("A2SdCHwafB0Dcaed0000").to_sdata()`


<a id="visium-spatial-gene-expression-placenta-w3rgxmap6qjjqoyv0000"></a>
## Human placenta

- uid: `W3RgxmAp6qJJQoYV0000`
- Page: /datasets/visium-spatial-gene-expression-placenta-w3rgxmap6qjjqoyv0000/
- Technology: Visium
- Organism: human
- Tissue: placenta
- Condition: COVID-19
- Modality: RNA
- Observations (spots): 369
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/37423216/
- Publication: https://doi.org/10.1016/j.medj.2023.06.003
- Collections: [doi-10-1016-j-medj-2023-06-003](/collections/md/6.md#doi-10-1016-j-medj-2023-06-003)
- Load: `Catalog().dataset("W3RgxmAp6qJJQoYV0000").to_sdata()`


<a id="visium-spatial-gene-expression-mucosa-abhe2yubamk16p2w0000"></a>
## Human mucosa

- uid: `aBhe2yUBAMk16P2w0000`
- Page: /datasets/visium-spatial-gene-expression-mucosa-abhe2yubamk16p2w0000/
- Technology: Visium
- Organism: human
- Tissue: mucosa
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268014
- Publication: https://doi.org/10.1038/s41588-026-02723-7
- Collections: [geo-gse268014](/collections/md/a.md#geo-gse268014)
- Load: `Catalog().dataset("aBhe2yUBAMk16P2w0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-xujhlgejzzz9v9yi0000"></a>
## Human basal ganglion

- uid: `XUjHlGejZzZ9V9yi0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-xujhlgejzzz9v9yi0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 25,353
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("XUjHlGejZzZ9V9yi0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-s3xchk5rvpgxccn50000"></a>
## Mouse ovary

- uid: `s3XCHk5rVPGXCCN50000`
- Page: /datasets/visium-spatial-gene-expression-ovary-s3xchk5rvpgxccn50000/
- Technology: Visium
- Organism: mouse
- Tissue: ovary
- Modality: RNA
- Observations (spots): 814
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE188257
- Publication: https://doi.org/10.1016/j.isci.2022.104819
- Collections: [geo-gse188257](/collections/md/e.md#geo-gse188257)
- Load: `Catalog().dataset("s3XCHk5rVPGXCCN50000").to_sdata()`


<a id="visium-spatial-gene-expression-eyelid-cumtjsbuh9ira49n0000"></a>
## Mouse eyelid

- uid: `cUmtjsbUH9Ira49N0000`
- Page: /datasets/visium-spatial-gene-expression-eyelid-cumtjsbuh9ira49n0000/
- Technology: Visium
- Organism: mouse
- Tissue: eyelid
- Modality: RNA
- Observations (spots): 375
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274497
- Publication: https://doi.org/10.1038/s41467-025-56907-6
- Load: `Catalog().dataset("cUmtjsbUH9Ira49N0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-eke2922uejro1jsu0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `eKE2922UEJRO1jsu0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-eke2922uejro1jsu0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("eKE2922UEJRO1jsu0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-9sphjmypdvwvxvu00000"></a>
## Macaque colon

- uid: `9SpHJmypDvWVXvU00000`
- Page: /datasets/visium-spatial-gene-expression-colon-9sphjmypdvwvxvu00000/
- Technology: Visium
- Organism: macaque
- Tissue: colon
- Condition: simian immunodeficiency virus infection
- Modality: RNA
- Observations (spots): 3,194
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341607
- Publication: https://doi.org/10.3389/fimmu.2026.1862864
- Collections: [geo-gse341607](/collections/md/3.md#geo-gse341607)
- Load: `Catalog().dataset("9SpHJmypDvWVXvU00000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-tod749eoulpzetwe0000"></a>
## Mouse brain

- uid: `TOD749EOUlpzEtWe0000`
- Page: /datasets/visium-spatial-gene-expression-brain-tod749eoulpzetwe0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,521
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313896
- Publication: https://doi.org/10.1016/j.cell.2026.03.013
- Collections: [geo-gse313896](/collections/md/f.md#geo-gse313896)
- Load: `Catalog().dataset("TOD749EOUlpzEtWe0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-element-2lggpaxlju98m77a0000"></a>
## Human bone element

- uid: `2lggpaxLJu98M77A0000`
- Page: /datasets/visium-spatial-gene-expression-bone-element-2lggpaxlju98m77a0000/
- Technology: Visium
- Organism: human
- Tissue: bone element
- Condition: osteosarcoma
- Modality: RNA
- Observations (spots): 2,406
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293065
- Publication: https://doi.org/10.1038/s41467-026-74603-x
- Collections: [geo-gse293065](/collections/md/7.md#geo-gse293065)
- Load: `Catalog().dataset("2lggpaxLJu98M77A0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-3vishk4ciyc30vje0000"></a>
## Human ovary

- uid: `3VIsHK4ciyc30vJE0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-3vishk4ciyc30vje0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274657
- Publication: https://doi.org/10.1038/s42003-025-08771-9
- Collections: [geo-gse274657](/collections/md/5.md#geo-gse274657)
- Load: `Catalog().dataset("3VIsHK4ciyc30vJE0000").to_sdata()`


<a id="10x-xenium-brain-j3g3wo3g5ecsd32c0000"></a>
## Mouse brain

- uid: `J3G3WO3g5ecSD32C0000`
- Page: /datasets/10x-xenium-brain-j3g3wo3g5ecsd32c0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 123,862
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310599
- Load: `Catalog().dataset("J3G3WO3g5ecSD32C0000").to_sdata()`


<a id="visium-spatial-gene-expression-testis-clwofdxsbpkvuedf0000"></a>
## Dog testis

- uid: `clWofdxsbpKVueDF0000`
- Page: /datasets/visium-spatial-gene-expression-testis-clwofdxsbpkvuedf0000/
- Technology: Visium
- Organism: dog
- Tissue: testis
- Condition: cryptorchidism
- Modality: RNA
- Observations (spots): 4,136
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9982019
- Collections: [geo-gse344594](/collections/md/4.md#geo-gse344594)
- Load: `Catalog().dataset("clWofdxsbpKVueDF0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-ftyyhl5e4fqkwfxw0000"></a>
## Human skin of body

- uid: `ftyyHL5E4FqKwfXw0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-ftyyhl5e4fqkwfxw0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (spots): 1,833
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313471
- Publication: https://doi.org/10.1186/s13287-026-05101-6
- Collections: [geo-gse313471](/collections/md/4.md#geo-gse313471)
- Load: `Catalog().dataset("ftyyHL5E4FqKwfXw0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-q4pljatorroigqkq0000"></a>
## Macaque basal ganglion

- uid: `Q4pLjATORRoigQkQ0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-q4pljatorroigqkq0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 19,434
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("Q4pLjATORRoigQkQ0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-lvcmyruu5o99buyf0000"></a>
## Human kidney

- uid: `LVcMyRuu5o99BuYf0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-lvcmyruu5o99buyf0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 4,422
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-01-03_21h35m37s
- Load: `Catalog().dataset("LVcMyRuu5o99BuYf0000").to_sdata()`


<a id="imaging-mass-cytometry-kidney-knywku1i4lubgulm0000"></a>
## Human kidney

- uid: `KnYWku1i4luBGULM0000`
- Page: /datasets/imaging-mass-cytometry-kidney-knywku1i4lubgulm0000/
- Technology: Imaging Mass Cytometry
- Organism: human
- Tissue: kidney
- Modality: protein
- Observations: 5,477
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD3694
- Collections: [bia-s-biad3694](/collections/md/7.md#bia-s-biad3694)
- Load: `Catalog().dataset("KnYWku1i4luBGULM0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-brain-wslf8bu2ah71gd3a0000"></a>
## Mouse brain

- uid: `WSlF8bu2Ah71gD3a0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-brain-wslf8bu2ah71gd3a0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: brain
- Modality: Metabolomics
- Observations: 174,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-05-06_18h26m06s
- Load: `Catalog().dataset("WSlF8bu2Ah71gD3a0000").to_sdata()`


<a id="mibi-tof-lymph-node-vvmxcddn07dbflwf0000"></a>
## Human lymph node

- uid: `VvMXcDdN07DbFLwF0000`
- Page: /datasets/mibi-tof-lymph-node-vvmxcddn07dbflwf0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,287
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("VvMXcDdN07DbFLwF0000").to_sdata()`


<a id="mibi-tof-breast-fg4fdt334syvea3z0000"></a>
## Human breast

- uid: `fG4Fdt334sYvEA3Z0000`
- Page: /datasets/mibi-tof-breast-fg4fdt334syvea3z0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,246
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("fG4Fdt334sYvEA3Z0000").to_sdata()`


<a id="mibi-tof-breast-meqwkai0r0srferr0000"></a>
## Human breast

- uid: `mEqWKAi0r0sRFERR0000`
- Page: /datasets/mibi-tof-breast-meqwkai0r0srferr0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,909
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("mEqWKAi0r0sRFERR0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-vtcx9jq3ceeubfuj0000"></a>
## Human lymph node

- uid: `vTCX9jq3CeeUbfuJ0000`
- Page: /datasets/phenocycler-fusion-lymph-node-vtcx9jq3ceeubfuj0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Modality: protein
- Observations (cells): 14,116
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("vTCX9jq3CeeUbfuJ0000").to_sdata()`


<a id="10x-xenium-brain-s5dd5xxxvdg1duzx0000"></a>
## Human brain

- uid: `s5DD5xxxvDg1Duzx0000`
- Page: /datasets/10x-xenium-brain-s5dd5xxxvdg1duzx0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (cells): 61,129
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260452
- Publication: https://doi.org/10.1038/s41586-026-10214-2
- Load: `Catalog().dataset("s5DD5xxxvDg1Duzx0000").to_sdata()`