# SpatialData-DB datasets, shard 75

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-elzlm4pwffrduifv0000"></a>
## Mouse brain

- uid: `eLzLm4PwffrDUiFv0000`
- Page: /datasets/visium-spatial-gene-expression-brain-elzlm4pwffrduifv0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 4,068
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319409
- Publication: https://doi.org/10.1186/s40478-025-02219-1
- Collections: [geo-gse319409](/collections/md/8.md#geo-gse319409)
- Load: `Catalog().dataset("eLzLm4PwffrDUiFv0000").to_sdata()`


<a id="spatial-transcriptomics-brain-yuqewiqhiok1fpeg0000"></a>
## Mouse brain

- uid: `YuQEwiqHiOK1FPeG0000`
- Page: /datasets/spatial-transcriptomics-brain-yuqewiqhiok1fpeg0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 152
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("YuQEwiqHiOK1FPeG0000").to_sdata()`


<a id="spatial-transcriptomics-brain-k9rtgn3a0rr8wlhu0000"></a>
## Mouse brain

- uid: `K9RTGN3a0RR8WLhU0000`
- Page: /datasets/spatial-transcriptomics-brain-k9rtgn3a0rr8wlhu0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 546
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("K9RTGN3a0RR8WLhU0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-xlfmvwp52aop4nuq0000"></a>
## Mouse spinal cord

- uid: `XLFMvwp52aoP4nUq0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-xlfmvwp52aop4nuq0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 330
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("XLFMvwp52aoP4nUq0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-ssnmgsggkf8cdxg50000"></a>
## Mouse liver

- uid: `ssNMGSgGkF8CDxg50000`
- Page: /datasets/visium-spatial-gene-expression-liver-ssnmgsggkf8cdxg50000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: hepatoblastoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-023-39717-6
- Publication: https://doi.org/10.1038/s41467-023-39717-6
- Collections: [doi-10-1038-s41467-023-39717-6](/collections/md/4.md#doi-10-1038-s41467-023-39717-6)
- Load: `Catalog().dataset("ssNMGSgGkF8CDxg50000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-tazftvxot6v4eryt0000"></a>
## Human intestine

- uid: `tazfTvxot6v4erYT0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-tazftvxot6v4eryt0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: colon adenocarcinoma
- Modality: RNA
- Observations (spots): 1,727
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.cell.com/cell/fulltext/S0092-8674(23)01222-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867423012229%3Fshowall%3Dtrue#secsectitle0020
- Publication: https://doi.org/10.1016/j.cell.2023.11.006
- Collections: [doi-10-1016-j-cell-2023-11-006](/collections/md/1.md#doi-10-1016-j-cell-2023-11-006)
- Load: `Catalog().dataset("tazfTvxot6v4erYT0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-1tdmivyrwoeihh3b0000"></a>
## Mouse spinal cord

- uid: `1tDmiVyrWoeihh3B0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-1tdmivyrwoeihh3b0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 239
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("1tDmiVyrWoeihh3B0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-afeznebbxkzpvjle0000"></a>
## Mouse spinal cord

- uid: `AFEZnEBBXKzPvJlE0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-afeznebbxkzpvjle0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 130
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("AFEZnEBBXKzPvJlE0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-sb9sq4okuujgbolq0000"></a>
## Human intestine

- uid: `SB9sQ4okuuJgbOLq0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-sb9sq4okuujgbolq0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: colon adenocarcinoma
- Modality: RNA
- Observations (spots): 4,511
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.cell.com/cell/fulltext/S0092-8674(23)01222-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867423012229%3Fshowall%3Dtrue#secsectitle0020
- Publication: https://doi.org/10.1016/j.cell.2023.11.006
- Collections: [doi-10-1016-j-cell-2023-11-006](/collections/md/1.md#doi-10-1016-j-cell-2023-11-006)
- Load: `Catalog().dataset("SB9sQ4okuuJgbOLq0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-60u29be78hbq6akx0000"></a>
## Human skin of body

- uid: `60U29Be78Hbq6aKX0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-60u29be78hbq6akx0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: lichen planus
- Modality: RNA
- Observations (spots): 695
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("60U29Be78Hbq6aKX0000").to_sdata()`


<a id="visium-spatial-gene-expression-mucosa-twmasswlnfkdowby0000"></a>
## Human mucosa

- uid: `TWmasSWlNfkdowBY0000`
- Page: /datasets/visium-spatial-gene-expression-mucosa-twmasswlnfkdowby0000/
- Technology: Visium
- Organism: human
- Tissue: mucosa
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268014
- Publication: https://doi.org/10.1038/s41588-026-02723-7
- Collections: [geo-gse268014](/collections/md/a.md#geo-gse268014)
- Load: `Catalog().dataset("TWmasSWlNfkdowBY0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-vhzk2zj0n4rjnytq0000"></a>
## Human brain

- uid: `VhZk2ZJ0n4rJNYTQ0000`
- Page: /datasets/visium-spatial-gene-expression-brain-vhzk2zj0n4rjnytq0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 2,253
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE235672
- Publication: https://doi.org/10.1038/s43018-023-00598-9
- Collections: [geo-gse235672](/collections/md/b.md#geo-gse235672)
- Load: `Catalog().dataset("VhZk2ZJ0n4rJNYTQ0000").to_sdata()`


<a id="visium-spatial-gene-expression-mucosa-of-oral-region-kwyzehjacsjenv8u0000"></a>
## Mouse mucosa of oral region

- uid: `kWYZEhjaCSjENv8U0000`
- Page: /datasets/visium-spatial-gene-expression-mucosa-of-oral-region-kwyzehjacsjenv8u0000/
- Technology: Visium
- Organism: mouse
- Tissue: mucosa of oral region
- Modality: RNA
- Observations (spots): 1,288
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE287384
- Publication: https://doi.org/10.1126/scitranslmed.adk2101
- Collections: [geo-gse287384](/collections/md/a.md#geo-gse287384)
- Load: `Catalog().dataset("kWYZEhjaCSjENv8U0000").to_sdata()`


<a id="visium-spatial-gene-expression-decidua-basalis-lxm32yqwrn8b5szp0000"></a>
## Human decidua basalis

- uid: `LXm32yQwrn8b5szP0000`
- Page: /datasets/visium-spatial-gene-expression-decidua-basalis-lxm32yqwrn8b5szp0000/
- Technology: Visium
- Organism: human
- Tissue: decidua basalis
- Modality: RNA
- Observations (spots): 871
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301306
- Publication: https://doi.org/10.1093/humrep/deag078
- Collections: [geo-gse301306](/collections/md/3.md#geo-gse301306)
- Load: `Catalog().dataset("LXm32yQwrn8b5szP0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-zup24cecqlpbkour0000"></a>
## Mouse lung

- uid: `zuP24CEcqlpbKOUr0000`
- Page: /datasets/visium-spatial-gene-expression-lung-zup24cecqlpbkour0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: pulmonary fibrosis
- Modality: RNA
- Observations (spots): 1,303
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7454043
- Collections: [geo-gse234198](/collections/md/6.md#geo-gse234198)
- Load: `Catalog().dataset("zuP24CEcqlpbKOUr0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-4jy41dx0kcjkpg9f0000"></a>
## Human lung

- uid: `4JY41dx0kCjkPG9f0000`
- Page: /datasets/visium-spatial-gene-expression-lung-4jy41dx0kcjkpg9f0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: lung adenocarcinoma
- Modality: RNA
- Observations (spots): 2,801
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273378
- Publication: https://doi.org/10.1038/s41467-026-70600-2
- Collections: [geo-gse273378](/collections/md/2.md#geo-gse273378)
- Load: `Catalog().dataset("4JY41dx0kCjkPG9f0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-odrit57vlkjcq3f70000"></a>
## Mouse breast

- uid: `odRIt57VLkjcq3F70000`
- Page: /datasets/visium-spatial-gene-expression-breast-odrit57vlkjcq3f70000/
- Technology: Visium
- Organism: mouse
- Tissue: breast
- Condition: breast carcinoma
- Modality: RNA
- Observations (spots): 3,561
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299631
- Collections: [geo-gse299631](/collections/md/e.md#geo-gse299631)
- Load: `Catalog().dataset("odRIt57VLkjcq3F70000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-fwhqawrgv5drva0k0000"></a>
## Human entorhinal cortex

- uid: `FWhqAwRGV5DRVA0K0000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-fwhqawrgv5drva0k0000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("FWhqAwRGV5DRVA0K0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-5hn75qxkh0dvbsvp0000"></a>
## Human pancreas

- uid: `5HN75QXkH0DvbSvp0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-5hn75qxkh0dvbsvp0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,346
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("5HN75QXkH0DvbSvp0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-ikvfnbgy2ncvblir0000"></a>
## Human kidney

- uid: `IKvfnBgY2NCVBLir0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-ikvfnbgy2ncvblir0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: diabetic kidney disease
- Modality: RNA
- Observations (spots): 1,682
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307817
- Publication: https://doi.org/10.1016/j.kint.2026.03.020
- Collections: [geo-gse307817](/collections/md/a.md#geo-gse307817)
- Load: `Catalog().dataset("IKvfnBgY2NCVBLir0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-white-matter-l4ooapynbwojdxtj0000"></a>
## Human brain white matter

- uid: `l4ooApyNBwoJDxtj0000`
- Page: /datasets/visium-spatial-gene-expression-brain-white-matter-l4ooapynbwojdxtj0000/
- Technology: Visium
- Organism: human
- Tissue: brain white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (spots): 3,551
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE277435
- Publication: https://doi.org/10.1038/s41467-025-63371-9
- Collections: [geo-gse277435](/collections/md/0.md#geo-gse277435)
- Load: `Catalog().dataset("l4ooApyNBwoJDxtj0000").to_sdata()`


<a id="mibi-tof-breast-07suhavo1h99le3n0000"></a>
## Human breast

- uid: `07SUhavo1h99lE3n0000`
- Page: /datasets/mibi-tof-breast-07suhavo1h99le3n0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,520
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("07SUhavo1h99lE3n0000").to_sdata()`


<a id="merfish-brain-pyh5ufrzda8n1hpf0000"></a>
## Mouse brain

- uid: `Pyh5uFRZdA8n1HPF0000`
- Page: /datasets/merfish-brain-pyh5ufrzda8n1hpf0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 13,729
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("Pyh5uFRZdA8n1HPF0000").to_sdata()`


<a id="vizgen-merscope-unknown-tlhvb4tugplqksqt0000"></a>
## Human unknown

- uid: `Tlhvb4TUgPLQksqT0000`
- Page: /datasets/vizgen-merscope-unknown-tlhvb4tugplqksqt0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: unknown
- Modality: RNA
- Observations (cells): 15,120
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE308147
- Publication: https://doi.org/10.1038/s41467-025-64990-y
- Collections: [geo-gsm9238734](/collections/md/8.md#geo-gsm9238734)
- Load: `Catalog().dataset("Tlhvb4TUgPLQksqT0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-bbtlvrzrextn7ywd0000"></a>
## Mouse kidney

- uid: `BbTLVRZreXtn7yWD0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-bbtlvrzrextn7ywd0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: kidney
- Modality: Metabolomics
- Observations: 27,674
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-03-28_18h03m06s
- Load: `Catalog().dataset("BbTLVRZreXtn7yWD0000").to_sdata()`


<a id="10x-xenium-bone-marrow-osiqs9tpbdy8reqj0000"></a>
## Human bone marrow

- uid: `OSIqs9TPBdY8reQj0000`
- Page: /datasets/10x-xenium-bone-marrow-osiqs9tpbdy8reqj0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Modality: RNA
- Observations (cells): 435,167
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE345302
- Publication: https://doi.org/10.1158/2643-3230.BCD-26-0080
- Load: `Catalog().dataset("OSIqs9TPBdY8reQj0000").to_sdata()`


<a id="vizgen-merscope-brain-0azqf3m8bv9phzjw0000"></a>
## Mouse brain

- uid: `0aZQf3m8Bv9pHZJW0000`
- Page: /datasets/vizgen-merscope-brain-0azqf3m8bv9phzjw0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 304,263
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("0aZQf3m8Bv9pHZJW0000").to_sdata()`


<a id="10x-xenium-descending-colon-ma2kccqf2vjxtjop0000"></a>
## Human descending colon

- uid: `MA2kccqf2vjXTjOP0000`
- Page: /datasets/10x-xenium-descending-colon-ma2kccqf2vjxtjop0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: descending colon
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 14,689
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("MA2kccqf2vjXTjOP0000").to_sdata()`