# SpatialData-DB datasets, shard 70

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-brain-2tr7434o4lgfuwci0000"></a>
## Human brain

- uid: `2TR7434o4LgFuwCi0000`
- Page: /datasets/visium-hd-brain-2tr7434o4lgfuwci0000/
- Technology: Visium HD
- Organism: human
- Tissue: brain
- Condition: brain cancer
- Modality: RNA
- Observations (bins): 521,175
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-6p5mm-human-brain-cancer
- Load: `Catalog().dataset("2TR7434o4LgFuwCi0000").to_sdata()`


<a id="visium-hd-brain-urjhhr0p4lrqbphe0000"></a>
## Mouse brain

- uid: `URjHhR0P4lrqBPHe0000`
- Page: /datasets/visium-hd-brain-urjhhr0p4lrqbphe0000/
- Technology: Visium HD
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (bins): 435,605
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-mouse-brain-fixed-frozen
- Load: `Catalog().dataset("URjHhR0P4lrqBPHe0000").to_sdata()`


<a id="10x-xenium-brain-ljdozh0l9zjbm04l0000"></a>
## Mouse brain

- uid: `LjDoZH0l9ZjBm04L0000`
- Page: /datasets/10x-xenium-brain-ljdozh0l9zjbm04l0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 130,870
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/fresh-frozen-mouse-brain-for-xenium-explorer-demo-1-standard
- Load: `Catalog().dataset("LjDoZH0l9ZjBm04L0000").to_sdata()`


<a id="10x-xenium-colon-rxlf0ekofagrab7z0000"></a>
## Human colon

- uid: `RXlf0EKofAgraB7z0000`
- Page: /datasets/10x-xenium-colon-rxlf0ekofagrab7z0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (cells): 647,524
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-colon-preview-data-xenium-human-colon-gene-expression-panel-1-standard
- Load: `Catalog().dataset("RXlf0EKofAgraB7z0000").to_sdata()`


<a id="visium-spatial-gene-expression-zone-of-skin-wz2gvqhhnvvaxdb10000"></a>
## Human zone of skin

- uid: `WZ2GVQhhNvvaXdb10000`
- Page: /datasets/visium-spatial-gene-expression-zone-of-skin-wz2gvqhhnvvaxdb10000/
- Technology: Visium
- Organism: human
- Tissue: zone of skin
- Condition: systemic sclerosis
- Modality: RNA
- Observations (spots): 4,453
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312129
- Publication: https://doi.org/10.1172/jci.insight.198954
- Collections: [geo-gse312129](/collections/md/a.md#geo-gse312129)
- Load: `Catalog().dataset("WZ2GVQhhNvvaXdb10000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-mm0uztk2xlavaeha0000"></a>
## Mouse spinal cord

- uid: `mM0UztK2xlAVAEHA0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-mm0uztk2xlavaeha0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 281
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("mM0UztK2xlAVAEHA0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-c7tacju2zewmtmmw0000"></a>
## Human skin of body

- uid: `c7TacjU2zEWmTmmw0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-c7tacju2zewmtmmw0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: atopic eczema
- Modality: RNA
- Observations (spots): 923
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("c7TacjU2zEWmTmmw0000").to_sdata()`


<a id="vizgen-merscope-liver-il93x3irx1cazxs80000"></a>
## Mouse liver

- uid: `il93X3iRx1cAzxs80000`
- Page: /datasets/vizgen-merscope-liver-il93x3irx1cazxs80000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (cells): 140,698
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313704
- Collections: [geo-gse313704](/collections/md/9.md#geo-gse313704)
- Load: `Catalog().dataset("il93X3iRx1cAzxs80000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-cafmpwlyujewi8uf0000"></a>
## Mouse brain

- uid: `cAFMPWlyujEwi8uF0000`
- Page: /datasets/visium-spatial-gene-expression-brain-cafmpwlyujewi8uf0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,964
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE232910
- Publication: https://doi.org/10.1038/s41587-023-01937-y
- Collections: [geo-gse232910](/collections/md/0.md#geo-gse232910)
- Load: `Catalog().dataset("cAFMPWlyujEwi8uF0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-z7kdcmrk3w5nlwqb0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `z7KDCMRk3W5nLwqb0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-z7kdcmrk3w5nlwqb0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("z7KDCMRk3W5nLwqb0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-c65geysnymkdgdgz0000"></a>
## Rat brain

- uid: `c65GeySNyMKdgDgZ0000`
- Page: /datasets/visium-spatial-gene-expression-brain-c65geysnymkdgdgz0000/
- Technology: Visium
- Organism: rat
- Tissue: brain
- Condition: temporal lobe epilepsy
- Modality: RNA
- Observations (spots): 2,907
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301260
- Publication: https://doi.org/10.1186/s40478-026-02224-y
- Collections: [geo-gse301260](/collections/md/f.md#geo-gse301260)
- Load: `Catalog().dataset("c65GeySNyMKdgDgZ0000").to_sdata()`


<a id="visium-spatial-gene-expression-small-intestine-aq0wgpvycxfpnh7k0000"></a>
## Mouse small intestine

- uid: `AQ0WgpvYcxfpNh7k0000`
- Page: /datasets/visium-spatial-gene-expression-small-intestine-aq0wgpvycxfpnh7k0000/
- Technology: Visium
- Organism: mouse
- Tissue: small intestine
- Modality: RNA
- Observations (spots): 4,190
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7106693
- Collections: [geo-gse227742](/collections/md/9.md#geo-gse227742)
- Load: `Catalog().dataset("AQ0WgpvYcxfpNh7k0000").to_sdata()`


<a id="visium-spatial-gene-expression-ectocervix-szj1xj0uqqoccwq40000"></a>
## Human ectocervix

- uid: `SZJ1xJ0uqQOccwq40000`
- Page: /datasets/visium-spatial-gene-expression-ectocervix-szj1xj0uqqoccwq40000/
- Technology: Visium
- Organism: human
- Tissue: ectocervix
- Modality: RNA
- Observations (spots): 1,040
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9053846
- Collections: [geo-gse300112](/collections/md/2.md#geo-gse300112)
- Load: `Catalog().dataset("SZJ1xJ0uqQOccwq40000").to_sdata()`


<a id="10x-xenium-larynx-wfom2tpwiuvb5gc90000"></a>
## Human larynx

- uid: `WfoM2TpWiuVb5gC90000`
- Page: /datasets/10x-xenium-larynx-wfom2tpwiuvb5gc90000/
- Technology: 10x Xenium
- Organism: human
- Tissue: larynx
- Condition: laryngeal squamous cell carcinoma
- Modality: RNA
- Observations (cells): 59,995
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE300147
- Publication: https://doi.org/10.1126/sciimmunol.aec3133
- Load: `Catalog().dataset("WfoM2TpWiuVb5gC90000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-jvagmityvqzjqyz20000"></a>
## Mouse liver

- uid: `jvAGMiTYvqzjqYZ20000`
- Page: /datasets/visium-spatial-gene-expression-liver-jvagmityvqzjqyz20000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: visceral leishmaniasis
- Modality: RNA
- Observations (spots): 1,446
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8810741
- Collections: [geo-gse290324](/collections/md/9.md#geo-gse290324)
- Load: `Catalog().dataset("jvAGMiTYvqzjqYZ20000").to_sdata()`


<a id="10x-xenium-brain-b02mzywt4dcmsvvh0000"></a>
## Human brain

- uid: `b02mzyWt4dCMSVvh0000`
- Page: /datasets/10x-xenium-brain-b02mzywt4dcmsvvh0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (cells): 8,016
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE339006
- Load: `Catalog().dataset("b02mzyWt4dCMSVvh0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-t6gapzndpwveyfss0000"></a>
## Mouse skin of body

- uid: `T6gApZNdPwVEyfSs0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-t6gapzndpwveyfss0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (spots): 462
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9376204
- Collections: [geo-gse313828](/collections/md/9.md#geo-gse313828)
- Load: `Catalog().dataset("T6gApZNdPwVEyfSs0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-it2z40orhyvpwlkf0000"></a>
## Human ovary

- uid: `It2z40ORHYvpwlKf0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-it2z40orhyvpwlkf0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 1,799
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327312
- Collections: [geo-gse327312](/collections/md/b.md#geo-gse327312)
- Load: `Catalog().dataset("It2z40ORHYvpwlKf0000").to_sdata()`


<a id="visium-spatial-gene-expression-placenta-wlcpy9jm8youzdcw0000"></a>
## Mouse placenta

- uid: `wlCPy9JM8yOuzDCw0000`
- Page: /datasets/visium-spatial-gene-expression-placenta-wlcpy9jm8youzdcw0000/
- Technology: Visium
- Organism: mouse
- Tissue: placenta
- Modality: RNA
- Observations (spots): 2,087
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333401
- Publication: https://doi.org/10.64898/2026.07.11.732137
- Collections: [geo-gse333401](/collections/md/5.md#geo-gse333401)
- Load: `Catalog().dataset("wlCPy9JM8yOuzDCw0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-v2tybrpqmbuve2hg0000"></a>
## Mouse brain

- uid: `V2tyBrPqmBuvE2hG0000`
- Page: /datasets/visium-spatial-gene-expression-brain-v2tybrpqmbuve2hg0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,860
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("V2tyBrPqmBuvE2hG0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-mxs1cbfjzkguzfvq0000"></a>
## Human colon

- uid: `mxS1cBFjzkguZFvq0000`
- Page: /datasets/visium-spatial-gene-expression-colon-mxs1cbfjzkguzfvq0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 3,565
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334323
- Collections: [geo-gse334323](/collections/md/a.md#geo-gse334323)
- Load: `Catalog().dataset("mxS1cBFjzkguZFvq0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-an3z8jemjrt9nadm0000"></a>
## Human skin of body

- uid: `aN3Z8JeMjRT9nADm0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-an3z8jemjrt9nadm0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (spots): 1,871
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313471
- Publication: https://doi.org/10.1186/s13287-026-05101-6
- Collections: [geo-gse313471](/collections/md/4.md#geo-gse313471)
- Load: `Catalog().dataset("aN3Z8JeMjRT9nADm0000").to_sdata()`


<a id="visium-spatial-gene-expression-amygdala-tiudslpjheykxs4v0000"></a>
## Human amygdala

- uid: `TiudslPJheykXs4v0000`
- Page: /datasets/visium-spatial-gene-expression-amygdala-tiudslpjheykxs4v0000/
- Technology: Visium
- Organism: human
- Tissue: amygdala
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342709
- Collections: [geo-gse342709](/collections/md/a.md#geo-gse342709)
- Load: `Catalog().dataset("TiudslPJheykXs4v0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-23qtmj7cjmicpfct0000"></a>
## Macaque basal ganglion

- uid: `23qTmJ7CJMIcpFct0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-23qtmj7cjmicpfct0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 27,207
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("23qTmJ7CJMIcpFct0000").to_sdata()`


<a id="mibi-tof-breast-ecdo25ocvgitkppl0000"></a>
## Human breast

- uid: `EcdO25oCvgiTkPpL0000`
- Page: /datasets/mibi-tof-breast-ecdo25ocvgitkppl0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,232
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("EcdO25oCvgiTkPpL0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-ideow2qw1vfzv2iv0000"></a>
## Human kidney

- uid: `ideoW2QW1vFZv2iv0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-ideow2qw1vfzv2iv0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 5,251
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2021-02-18_00h36m58s
- Load: `Catalog().dataset("ideoW2QW1vFZv2iv0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-placenta-fijyrjwmtaf1e5ns0000"></a>
## Human placenta

- uid: `fijyRjWmTaf1e5NS0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-placenta-fijyrjwmtaf1e5ns0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: placenta
- Modality: Metabolomics
- Observations: 64,256
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2024-07-12_21h29m37s
- Load: `Catalog().dataset("fijyRjWmTaf1e5NS0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-yzsiwtcmvbkuxzfg0000"></a>
## Human kidney

- uid: `YZSIWtcmVbKuXZFg0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-yzsiwtcmvbkuxzfg0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 9,828
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-05-26_22h00m03s
- Load: `Catalog().dataset("YZSIWtcmVbKuXZFg0000").to_sdata()`


<a id="mibi-tof-breast-lypkwotfr9kcj2yt0000"></a>
## Human breast

- uid: `LypKWOTfr9kcJ2yt0000`
- Page: /datasets/mibi-tof-breast-lypkwotfr9kcj2yt0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,859
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("LypKWOTfr9kcJ2yt0000").to_sdata()`


<a id="mibi-tof-breast-vstumczucwbewcr80000"></a>
## Human breast

- uid: `VsTumcZucwbEwCR80000`
- Page: /datasets/mibi-tof-breast-vstumczucwbewcr80000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,281
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("VsTumcZucwbEwCR80000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-jliqjnrsmvple15y0000"></a>
## Human lymph node

- uid: `JLiQjnrsMVPLe15y0000`
- Page: /datasets/phenocycler-fusion-lymph-node-jliqjnrsmvple15y0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: protein
- Observations (cells): 12,695
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("JLiQjnrsMVPLe15y0000").to_sdata()`


<a id="10x-xenium-brain-6remisffjdywdwa30000"></a>
## Human brain

- uid: `6REMisFfjdYwdWA30000`
- Page: /datasets/10x-xenium-brain-6remisffjdywdwa30000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (cells): 104,122
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260452
- Publication: https://doi.org/10.1038/s41586-026-10214-2
- Load: `Catalog().dataset("6REMisFfjdYwdWA30000").to_sdata()`


<a id="mibi-tof-breast-kosxa0vi6l6mvr040000"></a>
## Human breast

- uid: `kOSxa0Vi6l6MVr040000`
- Page: /datasets/mibi-tof-breast-kosxa0vi6l6mvr040000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,708
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("kOSxa0Vi6l6MVr040000").to_sdata()`