# SpatialData-DB datasets, shard 6e

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-breast-ujnpd7w8tg5eomao0000"></a>
## Human breast

- uid: `uJNPd7W8tg5eOmao0000`
- Page: /datasets/visium-hd-breast-ujnpd7w8tg5eomao0000/
- Technology: Visium HD
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (bins): 700,193
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-human-breast-cancer-fixed-frozen
- Load: `Catalog().dataset("uJNPd7W8tg5eOmao0000").to_sdata()`


<a id="visium-hd-brain-u6gkyool1lholpgu0000"></a>
## Mouse brain

- uid: `u6GKYoOL1lhoLPgU0000`
- Page: /datasets/visium-hd-brain-u6gkyool1lholpgu0000/
- Technology: Visium HD
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (bins): 393,543
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-libraries-of-mouse-brain-he
- Load: `Catalog().dataset("u6GKYoOL1lhoLPgU0000").to_sdata()`


<a id="visium-spatial-gene-expression-caudate-nucleus-xcj39salzzaztbht0000"></a>
## Mouse caudate nucleus

- uid: `Xcj39sALzZaZtBhT0000`
- Page: /datasets/visium-spatial-gene-expression-caudate-nucleus-xcj39salzzaztbht0000/
- Technology: Visium
- Organism: mouse
- Tissue: caudate nucleus
- Condition: Parkinson disease
- Modality: RNA
- Observations (spots): 4,868
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE232910
- Publication: https://doi.org/10.1038/s41587-023-01937-y
- Collections: [geo-gse232910](/collections/md/0.md#geo-gse232910)
- Load: `Catalog().dataset("Xcj39sALzZaZtBhT0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-element-uhqhqatenmanjxuk0000"></a>
## Mouse bone element

- uid: `uhQhqATeNmaNJxUk0000`
- Page: /datasets/visium-spatial-gene-expression-bone-element-uhqhqatenmanjxuk0000/
- Technology: Visium
- Organism: mouse
- Tissue: bone element
- Modality: RNA
- Observations (spots): 1,298
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-023-36071-5
- Publication: https://doi.org/10.1038/s41467-023-36071-5
- Collections: [doi-10-1038-s41467-023-36071-5](/collections/md/9.md#doi-10-1038-s41467-023-36071-5)
- Load: `Catalog().dataset("uhQhqATeNmaNJxUk0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-qrdyadxg4argtvev0000"></a>
## Human lung

- uid: `qRDYaDxg4aRgTVeV0000`
- Page: /datasets/visium-spatial-gene-expression-lung-qrdyadxg4argtvev0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: obsolete idiopathic pulmonary fibrosis
- Modality: RNA
- Observations (spots): 4,430
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE248082
- Publication: https://doi.org/10.1183/13993003.01114-2024
- Collections: [geo-gse248082](/collections/md/3.md#geo-gse248082)
- Load: `Catalog().dataset("qRDYaDxg4aRgTVeV0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-n1nppi3jofmxeoga0000"></a>
## Mouse pancreas

- uid: `N1nPPI3jOFMxEOga0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-n1nppi3jofmxeoga0000/
- Technology: Visium
- Organism: mouse
- Tissue: pancreas
- Modality: RNA
- Observations (spots): 1,455
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE249121
- Publication: https://doi.org/10.1186/s13073-025-01452-6
- Collections: [geo-gse249121](/collections/md/d.md#geo-gse249121)
- Load: `Catalog().dataset("N1nPPI3jOFMxEOga0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-ieo8pdrjvseiiu7i0000"></a>
## Mouse intestine

- uid: `IEO8PDRJvseIiu7I0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-ieo8pdrjvseiiu7i0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 4,414
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245274
- Publication: https://doi.org/10.1038/s41586-024-08216-z
- Collections: [geo-gse245274](/collections/md/1.md#geo-gse245274)
- Load: `Catalog().dataset("IEO8PDRJvseIiu7I0000").to_sdata()`


<a id="visium-spatial-gene-expression-peritoneum-tytihv1ulnybd9rq0000"></a>
## Human peritoneum

- uid: `TYTIhV1ULNYBd9RQ0000`
- Page: /datasets/visium-spatial-gene-expression-peritoneum-tytihv1ulnybd9rq0000/
- Technology: Visium
- Organism: human
- Tissue: peritoneum
- Condition: desmoplastic small round cell tumor
- Modality: RNA
- Observations (spots): 3,583
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE263523
- Publication: https://doi.org/10.1016/j.xcrm.2024.101582
- Collections: [geo-gse267806](/collections/md/4.md#geo-gse267806)
- Load: `Catalog().dataset("TYTIhV1ULNYBd9RQ0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-whqbpb62mecywbg40000"></a>
## Mouse lung

- uid: `wHqbPB62mecYWbg40000`
- Page: /datasets/visium-spatial-gene-expression-lung-whqbpb62mecywbg40000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: coccidioidomycosis
- Modality: RNA
- Observations (spots): 4,991
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274767
- Publication: https://doi.org/10.1128/mbio.02562-24
- Collections: [geo-gse274767](/collections/md/7.md#geo-gse274767)
- Load: `Catalog().dataset("wHqbPB62mecYWbg40000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-xwdjzemkm6x1axtq0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `XwdJzemKM6X1aXTq0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-xwdjzemkm6x1axtq0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("XwdJzemKM6X1aXTq0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-x2gsdx6wbi7ugn3z0000"></a>
## Mouse skin of body

- uid: `x2gSdx6WBI7Ugn3Z0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-x2gsdx6wbi7ugn3z0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE178758
- Publication: https://doi.org/10.1073/pnas.2110025118
- Collections: [geo-gse178758](/collections/md/6.md#geo-gse178758)
- Load: `Catalog().dataset("x2gSdx6WBI7Ugn3Z0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-f7xrfjrljdgghmjf0000"></a>
## Mouse liver

- uid: `f7XRFjrlJdGghmjf0000`
- Page: /datasets/visium-spatial-gene-expression-liver-f7xrfjrljdgghmjf0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 1,338
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE236424
- Collections: [geo-gse236424](/collections/md/3.md#geo-gse236424)
- Load: `Catalog().dataset("f7XRFjrlJdGghmjf0000").to_sdata()`


<a id="visium-spatial-gene-expression-colorectum-etwgem211qdyxyxr0000"></a>
## Human colorectum

- uid: `ETWGEM211qDYxYxR0000`
- Page: /datasets/visium-spatial-gene-expression-colorectum-etwgem211qdyxyxr0000/
- Technology: Visium
- Organism: human
- Tissue: colorectum
- Condition: colorectal cancer
- Modality: RNA
- Observations (spots): 4,148
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7089855
- Collections: [geo-gse226997](/collections/md/a.md#geo-gse226997)
- Load: `Catalog().dataset("ETWGEM211qDYxYxR0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-fdqihwzuqvwgcx8n0000"></a>
## Human skin of body

- uid: `FDqiHwzUqvWGcX8n0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-fdqihwzuqvwgcx8n0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 1,194
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189294
- Collections: [geo-gse263298](/collections/md/5.md#geo-gse263298)
- Load: `Catalog().dataset("FDqiHwzUqvWGcX8n0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-cvpyvrp2s1jq9vsz0000"></a>
## Mouse skin of body

- uid: `cVpYVRp2S1jQ9VsZ0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-cvpyvrp2s1jq9vsz0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (spots): 2,746
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296660
- Publication: https://doi.org/10.1016/j.immuni.2025.07.007
- Collections: [geo-gse296660](/collections/md/8.md#geo-gse296660)
- Load: `Catalog().dataset("cVpYVRp2S1jQ9VsZ0000").to_sdata()`


<a id="visium-spatial-gene-expression-white-matter-j2tkx5mvjmzgjmle0000"></a>
## Human white matter

- uid: `j2Tkx5MVjMzgjMLE0000`
- Page: /datasets/visium-spatial-gene-expression-white-matter-j2tkx5mvjmzgjmle0000/
- Technology: Visium
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (spots): 4,789
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6368794
- Collections: [geo-gse208747](/collections/md/d.md#geo-gse208747)
- Load: `Catalog().dataset("j2Tkx5MVjMzgjMLE0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-cfqk7bfwg3sxd8ln0000"></a>
## Mouse liver

- uid: `cFQK7bfwg3SXd8lN0000`
- Page: /datasets/visium-spatial-gene-expression-liver-cfqk7bfwg3sxd8ln0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 2,928
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7116325
- Collections: [geo-gse228195](/collections/md/1.md#geo-gse228195)
- Load: `Catalog().dataset("cFQK7bfwg3SXd8lN0000").to_sdata()`


<a id="10x-xenium-vestibulocochlear-nerve-hiizrtusdhsji0g00000"></a>
## Human vestibulocochlear nerve

- uid: `hIIZRTUSdHsJI0G00000`
- Page: /datasets/10x-xenium-vestibulocochlear-nerve-hiizrtusdhsji0g00000/
- Technology: 10x Xenium
- Organism: human
- Tissue: vestibulocochlear nerve
- Condition: acoustic neuroma
- Modality: RNA
- Observations (cells): 246,812
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE345691
- Load: `Catalog().dataset("hIIZRTUSdHsJI0G00000").to_sdata()`


<a id="mibi-tof-breast-xs21yexgeuuajygy0000"></a>
## Human breast

- uid: `xS21YeXGEUUAjygY0000`
- Page: /datasets/mibi-tof-breast-xs21yexgeuuajygy0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,203
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("xS21YeXGEUUAjygY0000").to_sdata()`


<a id="stereo-seq-skin-of-body-irzhfnt6ksak6q450000"></a>
## Human skin of body

- uid: `iRzHfnT6kSak6q450000`
- Page: /datasets/stereo-seq-skin-of-body-irzhfnt6ksak6q450000/
- Technology: Stereo-seq
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations: 28,526
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE292156
- Collections: [geo-gse292156](/collections/md/e.md#geo-gse292156)
- Load: `Catalog().dataset("iRzHfnT6kSak6q450000").to_sdata()`


<a id="mibi-tof-breast-e2rsd0gtt3hz3eco0000"></a>
## Human breast

- uid: `E2Rsd0gtT3hz3eCo0000`
- Page: /datasets/mibi-tof-breast-e2rsd0gtt3hz3eco0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,864
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("E2Rsd0gtT3hz3eCo0000").to_sdata()`


<a id="mibi-tof-breast-a9htdpatzcsevdao0000"></a>
## Human breast

- uid: `A9HtdPaTZCSeVDAo0000`
- Page: /datasets/mibi-tof-breast-a9htdpatzcsevdao0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 6,690
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("A9HtdPaTZCSeVDAo0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-qruru4yanlnoystk0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `qrUru4yaNlnoYsTk0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-qruru4yanlnoystk0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 44,655
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("qrUru4yaNlnoYsTk0000").to_sdata()`


<a id="mibi-tof-breast-nkapuyw8lzslpjje0000"></a>
## Human breast

- uid: `NKaPuyW8lZSLpJJe0000`
- Page: /datasets/mibi-tof-breast-nkapuyw8lzslpjje0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,468
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("NKaPuyW8lZSLpJJe0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-llunkatubvjgpbfi0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `LlUnKaTUbvJgpbfI0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-llunkatubvjgpbfi0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 59,962
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("LlUnKaTUbvJgpbfI0000").to_sdata()`


<a id="10x-xenium-bone-marrow-cjqp7ij2dz7tmj5i0000"></a>
## Human bone marrow

- uid: `cJqp7IJ2dZ7Tmj5I0000`
- Page: /datasets/10x-xenium-bone-marrow-cjqp7ij2dz7tmj5i0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: smoldering plasma cell myeloma
- Modality: RNA
- Observations (cells): 721,958
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE345302
- Publication: https://doi.org/10.1158/2643-3230.BCD-26-0080
- Load: `Catalog().dataset("cJqp7IJ2dZ7Tmj5I0000").to_sdata()`


<a id="vizgen-merscope-brain-zwi9hptrsk6dtcsg0000"></a>
## Mouse brain

- uid: `zWi9HPtRsk6DtcSg0000`
- Page: /datasets/vizgen-merscope-brain-zwi9hptrsk6dtcsg0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 252,334
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("zWi9HPtRsk6DtcSg0000").to_sdata()`


<a id="mibi-tof-breast-czvtexjzboal7v5x0000"></a>
## Human breast

- uid: `CzvTEXjZBoaL7v5X0000`
- Page: /datasets/mibi-tof-breast-czvtexjzboal7v5x0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 8,009
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("CzvTEXjZBoaL7v5X0000").to_sdata()`


<a id="mibi-tof-breast-dsn1lmr7dus3f7kh0000"></a>
## Human breast

- uid: `dsn1lmR7dUs3f7kH0000`
- Page: /datasets/mibi-tof-breast-dsn1lmr7dus3f7kh0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,271
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("dsn1lmR7dUs3f7kH0000").to_sdata()`