# SpatialData-DB datasets, shard 68

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-breast-bszs13nwt4mqaqfk0000"></a>
## Human breast

- uid: `BsZs13nWt4MQaQFK0000`
- Page: /datasets/visium-spatial-gene-expression-breast-bszs13nwt4mqaqfk0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: breast neoplasm
- Modality: RNA
- Observations (spots): 4,991
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE289326
- Publication: https://doi.org/10.1158/1078-0432.ccr-25-4079
- Collections: [geo-gse289326](/collections/md/3.md#geo-gse289326)
- Load: `Catalog().dataset("BsZs13nWt4MQaQFK0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-cvzmuppy4jowqoln0000"></a>
## Human colon

- uid: `cvzmUpPy4joWqoLn0000`
- Page: /datasets/visium-spatial-gene-expression-colon-cvzmuppy4jowqoln0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 8,076
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312204
- Publication: https://doi.org/10.1038/s41467-026-71944-5
- Collections: [geo-gse312204](/collections/md/4.md#geo-gse312204)
- Load: `Catalog().dataset("cvzmUpPy4joWqoLn0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-ttl2wswcndn94ieh0000"></a>
## Mouse colon

- uid: `TtL2wSwCNdn94Ieh0000`
- Page: /datasets/visium-spatial-gene-expression-colon-ttl2wswcndn94ieh0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 9,138
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334067
- Publication: https://doi.org/10.1038/s41588-026-02673-0
- Collections: [geo-gse334067](/collections/md/b.md#geo-gse334067)
- Load: `Catalog().dataset("TtL2wSwCNdn94Ieh0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-lrxg4vsj4d3qx6sa0000"></a>
## Mouse brain

- uid: `lrxg4Vsj4d3qx6Sa0000`
- Page: /datasets/visium-spatial-gene-expression-brain-lrxg4vsj4d3qx6sa0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,592
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319409
- Publication: https://doi.org/10.1186/s40478-025-02219-1
- Collections: [geo-gse319409](/collections/md/8.md#geo-gse319409)
- Load: `Catalog().dataset("lrxg4Vsj4d3qx6Sa0000").to_sdata()`


<a id="visium-spatial-gene-expression-cerebral-cortex-87e1jhuh65fo9b4n0000"></a>
## Mouse cerebral cortex

- uid: `87E1jHUh65FO9B4n0000`
- Page: /datasets/visium-spatial-gene-expression-cerebral-cortex-87e1jhuh65fo9b4n0000/
- Technology: Visium
- Organism: mouse
- Tissue: cerebral cortex
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 1,740
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE226208
- Publication: https://doi.org/10.1038/s41467-024-46625-w
- Collections: [geo-gse226208](/collections/md/7.md#geo-gse226208)
- Load: `Catalog().dataset("87E1jHUh65FO9B4n0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-mvmseogtf3sczrrn0000"></a>
## Human brain

- uid: `mVmsEogtF3sCZRRn0000`
- Page: /datasets/visium-spatial-gene-expression-brain-mvmseogtf3sczrrn0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: astrocytoma (excluding glioblastoma)
- Modality: RNA
- Observations (spots): 729
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE318238
- Collections: [geo-gse318238](/collections/md/1.md#geo-gse318238)
- Load: `Catalog().dataset("mVmsEogtF3sCZRRn0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-23syeksfcfrsee1h0000"></a>
## Mouse spinal cord

- uid: `23SyekSFCfrSEE1h0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-23syeksfcfrsee1h0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 270
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("23SyekSFCfrSEE1h0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-pycdxwgalhv9vxb00000"></a>
## Human kidney

- uid: `PYcDXWGalhv9VXB00000`
- Page: /datasets/visium-spatial-gene-expression-kidney-pycdxwgalhv9vxb00000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: diabetic kidney disease
- Modality: RNA
- Observations (spots): 407
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10356613/
- Publication: https://doi.org/10.1038/s41586-023-05769-3
- Collections: [doi-10-1038-s41586-023-05769-3](/collections/md/e.md#doi-10-1038-s41586-023-05769-3)
- Load: `Catalog().dataset("PYcDXWGalhv9VXB00000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-y6bynfqkdrrqtlya0000"></a>
## Human prostate gland

- uid: `Y6BYnfqkdRRqtlYa0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-y6bynfqkdrrqtlya0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostatic acinar adenocarcinoma
- Modality: RNA
- Observations (spots): 1,418
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05023-2
- Publication: https://doi.org/10.1038/s41586-022-05023-2
- Collections: [doi-10-1038-s41586-022-05023-2](/collections/md/5.md#doi-10-1038-s41586-022-05023-2)
- Load: `Catalog().dataset("Y6BYnfqkdRRqtlYa0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-euiaipsahe9itpik0000"></a>
## Human breast

- uid: `EuIaIpSahE9iTPIK0000`
- Page: /datasets/visium-spatial-gene-expression-breast-euiaipsahe9itpik0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 821
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE210616
- Publication: https://doi.org/10.1158/0008-5472.CAN-22-2682
- Collections: [geo-gse210616](/collections/md/8.md#geo-gse210616)
- Load: `Catalog().dataset("EuIaIpSahE9iTPIK0000").to_sdata()`


<a id="visium-spatial-gene-expression-placenta-2lcm5qzqln50bppl0000"></a>
## Human placenta

- uid: `2lCm5qZQLN50BPpl0000`
- Page: /datasets/visium-spatial-gene-expression-placenta-2lcm5qzqln50bppl0000/
- Technology: Visium
- Organism: human
- Tissue: placenta
- Condition: COVID-19
- Modality: RNA
- Observations (spots): 1,323
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/37423216/
- Publication: https://doi.org/10.1016/j.medj.2023.06.003
- Collections: [doi-10-1016-j-medj-2023-06-003](/collections/md/6.md#doi-10-1016-j-medj-2023-06-003)
- Load: `Catalog().dataset("2lCm5qZQLN50BPpl0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-mfdivwf7feotowti0000"></a>
## Mouse liver

- uid: `mfDiVwf7FeoTOwtI0000`
- Page: /datasets/visium-spatial-gene-expression-liver-mfdivwf7feotowti0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 970
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE236424
- Collections: [geo-gse236424](/collections/md/3.md#geo-gse236424)
- Load: `Catalog().dataset("mfDiVwf7FeoTOwtI0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-ugtp8rrjgqlbdlsl0000"></a>
## Human ovary

- uid: `uGtP8RrJgQLBdlSl0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-ugtp8rrjgqlbdlsl0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: classic galactosemia
- Modality: RNA
- Observations (spots): 2,828
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268523
- Publication: https://doi.org/10.1002/ctm2.70043
- Collections: [geo-gse268523](/collections/md/8.md#geo-gse268523)
- Load: `Catalog().dataset("uGtP8RrJgQLBdlSl0000").to_sdata()`


<a id="visium-spatial-gene-expression-retina-tmsb5pl8kmiaxgmt0000"></a>
## Mouse retina

- uid: `tMSb5PL8KmIaxgmt0000`
- Page: /datasets/visium-spatial-gene-expression-retina-tmsb5pl8kmiaxgmt0000/
- Technology: Visium
- Organism: mouse
- Tissue: retina
- Modality: RNA
- Observations (spots): 575
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE248517
- Publication: https://doi.org/10.1038/s42003-025-07887-2
- Collections: [geo-gse248517](/collections/md/a.md#geo-gse248517)
- Load: `Catalog().dataset("tMSb5PL8KmIaxgmt0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-element-ciygvbtc6bvxj8jd0000"></a>
## Human bone element

- uid: `ciygvBTc6BVxj8jd0000`
- Page: /datasets/visium-spatial-gene-expression-bone-element-ciygvbtc6bvxj8jd0000/
- Technology: Visium
- Organism: human
- Tissue: bone element
- Condition: osteosarcoma
- Modality: RNA
- Observations (spots): 2,945
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293065
- Publication: https://doi.org/10.1038/s41467-026-74603-x
- Collections: [geo-gse293065](/collections/md/7.md#geo-gse293065)
- Load: `Catalog().dataset("ciygvBTc6BVxj8jd0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-auvzjcuf17sc6ssw0000"></a>
## Mouse kidney

- uid: `AuvzJcuF17sC6sSw0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-auvzjcuf17sc6ssw0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Modality: RNA
- Observations (spots): 3,453
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("AuvzJcuF17sC6sSw0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-qarbydlchb0jp5jk0000"></a>
## Human skin of body

- uid: `QarbydlcHB0Jp5Jk0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-qarbydlchb0jp5jk0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 2,830
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189293
- Collections: [geo-gse263298](/collections/md/5.md#geo-gse263298)
- Load: `Catalog().dataset("QarbydlcHB0Jp5Jk0000").to_sdata()`


<a id="10x-xenium-liver-lfa2vvzsfdp2w7qo0000"></a>
## Mouse liver

- uid: `Lfa2vVZsFdp2W7Qo0000`
- Page: /datasets/10x-xenium-liver-lfa2vvzsfdp2w7qo0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: liver
- Condition: alcoholic liver diseases
- Modality: RNA
- Observations (cells): 155,388
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320403
- Load: `Catalog().dataset("Lfa2vVZsFdp2W7Qo0000").to_sdata()`


<a id="merfish-brain-x0acbe13uwqx7fmi0000"></a>
## Mouse brain

- uid: `X0ACBE13UwqX7fmI0000`
- Page: /datasets/merfish-brain-x0acbe13uwqx7fmi0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 16,305
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("X0ACBE13UwqX7fmI0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-lung-48icvyuvjeaffdki0000"></a>
## Human lung

- uid: `48icVyUVJEaffDKI0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-lung-48icvyuvjeaffdki0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: lung
- Modality: Metabolomics
- Observations: 29,624
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2020-09-21_22h38m25s
- Load: `Catalog().dataset("48icVyUVJEaffDKI0000").to_sdata()`


<a id="vizgen-merscope-striatum-3zj6o1s2ymilvmob0000"></a>
## Mouse striatum

- uid: `3ZJ6O1s2YMilVMOb0000`
- Page: /datasets/vizgen-merscope-striatum-3zj6o1s2ymilvmob0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: striatum
- Modality: RNA
- Observations (cells): 73,872
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE262083
- Publication: https://doi.org/10.1038/s41467-025-63429-8
- Collections: [geo-gse262083](/collections/md/e.md#geo-gse262083)
- Load: `Catalog().dataset("3ZJ6O1s2YMilVMOb0000").to_sdata()`


<a id="mibi-tof-breast-echpafrllbowqanf0000"></a>
## Human breast

- uid: `EchPafrllboWQANF0000`
- Page: /datasets/mibi-tof-breast-echpafrllbowqanf0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,936
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("EchPafrllboWQANF0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-mqlwmkt14qvvhgar0000"></a>
## Human kidney

- uid: `MQlWmKt14qvvHGaR0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-mqlwmkt14qvvhgar0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 13,843
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-12-27_22h02m03s
- Load: `Catalog().dataset("MQlWmKt14qvvHGaR0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-qfccvisxftzj0s8z0000"></a>
## Human lymph node

- uid: `qfccViSxfTzj0s8Z0000`
- Page: /datasets/phenocycler-fusion-lymph-node-qfccvisxftzj0s8z0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: Burkitt lymphoma
- Modality: protein
- Observations (cells): 12,734
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("qfccViSxfTzj0s8Z0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-4skub1nvstar6bmv0000"></a>
## Human lymph node

- uid: `4SkUb1nVSTar6BMv0000`
- Page: /datasets/phenocycler-fusion-lymph-node-4skub1nvstar6bmv0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 18,797
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("4SkUb1nVSTar6BMv0000").to_sdata()`


<a id="10x-xenium-lung-htnfn4hairvwtf6m0000"></a>
## Human lung

- uid: `hTnFN4hAIrvWTF6M0000`
- Page: /datasets/10x-xenium-lung-htnfn4hairvwtf6m0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: chronic obstructive pulmonary disease
- Modality: RNA
- Observations (cells): 67,502
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310162
- Load: `Catalog().dataset("hTnFN4hAIrvWTF6M0000").to_sdata()`


<a id="mibi-tof-breast-kw3kowjd0rt9s7no0000"></a>
## Human breast

- uid: `kW3KOwJd0rT9S7nO0000`
- Page: /datasets/mibi-tof-breast-kw3kowjd0rt9s7no0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 600
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("kW3KOwJd0rT9S7nO0000").to_sdata()`


<a id="10x-xenium-descending-colon-w1qpmhdreotyi43q0000"></a>
## Human descending colon

- uid: `W1qPMhDrEoTyI43Q0000`
- Page: /datasets/10x-xenium-descending-colon-w1qpmhdreotyi43q0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: descending colon
- Condition: Crohn disease
- Modality: RNA
- Observations (cells): 54,265
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("W1qPMhDrEoTyI43Q0000").to_sdata()`


<a id="vizgen-merscope-brain-qggvzhefp4ehawx50000"></a>
## Mouse brain

- uid: `qGGVZhEFP4eHAWX50000`
- Page: /datasets/vizgen-merscope-brain-qggvzhefp4ehawx50000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 120,065
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("qGGVZhEFP4eHAWX50000").to_sdata()`