# SpatialData-DB datasets, shard 60

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-zpvzqjzqbdfkgpf40000"></a>
## Mouse brain

- uid: `zPVZqjZQBdfkGPf40000`
- Page: /datasets/visium-spatial-gene-expression-brain-zpvzqjzqbdfkgpf40000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,695
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/mouse-brain-serial-section-1-sagittal-anterior-1-standard-1-1-0
- Load: `Catalog().dataset("zPVZqjZQBdfkGPf40000").to_sdata()`


<a id="visium-spatial-gene-expression-superior-temporal-gyrus-1dexpsbet9g7sqs30000"></a>
## Human superior temporal gyrus

- uid: `1DEXpsbeT9G7sQS30000`
- Page: /datasets/visium-spatial-gene-expression-superior-temporal-gyrus-1dexpsbet9g7sqs30000/
- Technology: Visium
- Organism: human
- Tissue: superior temporal gyrus
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 14,108
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE263079
- Publication: https://doi.org/10.1038/s41591-025-03574-1
- Collections: [geo-gse263079](/collections/md/2.md#geo-gse263079)
- Load: `Catalog().dataset("1DEXpsbeT9G7sQS30000").to_sdata()`


<a id="visium-spatial-gene-expression-coronary-artery-dosk20km0b4vzft60000"></a>
## Human coronary artery

- uid: `DoSk20km0B4Vzft60000`
- Page: /datasets/visium-spatial-gene-expression-coronary-artery-dosk20km0b4vzft60000/
- Technology: Visium
- Organism: human
- Tissue: coronary artery
- Condition: atherosclerosis
- Modality: RNA
- Observations (spots): 952
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283269
- Publication: https://doi.org/10.3390/ijms26051949
- Collections: [geo-gse283269](/collections/md/3.md#geo-gse283269)
- Load: `Catalog().dataset("DoSk20km0B4Vzft60000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-xvzkojkzczyzpf4x0000"></a>
## Mouse spinal cord

- uid: `XVzKOjkZczyZpf4X0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-xvzkojkzczyzpf4x0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 87
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("XVzKOjkZczyZpf4X0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-n6cc04t615s50wpc0000"></a>
## Mouse spinal cord

- uid: `n6CC04t615S50wpC0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-n6cc04t615s50wpc0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 346
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("n6CC04t615S50wpC0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-hntcvamxjzrwnuyd0000"></a>
## Mouse spinal cord

- uid: `hntCVAMXjzrWnUYd0000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-hntcvamxjzrwnuyd0000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Modality: RNA
- Observations (spots): 556
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05385-7
- Publication: https://doi.org/10.1038/s41586-022-05385-7
- Collections: [doi-10-1038-s41586-022-05385-7](/collections/md/a.md#doi-10-1038-s41586-022-05385-7)
- Load: `Catalog().dataset("hntCVAMXjzrWnUYd0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-0vd8xbza2w1eivbg0000"></a>
## Human lung

- uid: `0vD8xbza2w1Eivbg0000`
- Page: /datasets/visium-spatial-gene-expression-lung-0vd8xbza2w1eivbg0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: COVID-19
- Modality: RNA
- Observations (spots): 758
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/36776149/
- Publication: https://doi.org/10.1016/j.xgen.2021.100065
- Collections: [doi-10-1016-j-xgen-2021-100065](/collections/md/0.md#doi-10-1016-j-xgen-2021-100065)
- Load: `Catalog().dataset("0vD8xbza2w1Eivbg0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-ttn6sgnu8jgtphmp0000"></a>
## Human skin of body

- uid: `TTN6SGnU8JgTphmp0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-ttn6sgnu8jgtphmp0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: psoriasis
- Modality: RNA
- Observations (spots): 818
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("TTN6SGnU8JgTphmp0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-knm6bncird9k997k0000"></a>
## Human basal ganglion

- uid: `knm6bncIrD9k997K0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-knm6bncird9k997k0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 70,121
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Load: `Catalog().dataset("knm6bncIrD9k997K0000").to_sdata()`


<a id="visium-spatial-gene-expression-descending-colon-xkknbxelq4qjxfwg0000"></a>
## Mouse descending colon

- uid: `xKKNBxElQ4QjXFWg0000`
- Page: /datasets/visium-spatial-gene-expression-descending-colon-xkknbxelq4qjxfwg0000/
- Technology: Visium
- Organism: mouse
- Tissue: descending colon
- Modality: RNA
- Observations (spots): 572
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE235742
- Publication: https://doi.org/10.1126/scitranslmed.adg5252
- Collections: [geo-gse235742](/collections/md/d.md#geo-gse235742)
- Load: `Catalog().dataset("xKKNBxElQ4QjXFWg0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-mq0utwpmzxnytwje0000"></a>
## Mouse colon

- uid: `MQ0uTWpmzXNyTWje0000`
- Page: /datasets/visium-spatial-gene-expression-colon-mq0utwpmzxnytwje0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colorectal carcinoma
- Modality: RNA
- Observations (spots): 2,787
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273489
- Publication: https://doi.org/10.1016/j.celrep.2025.115698
- Collections: [geo-gse273489](/collections/md/b.md#geo-gse273489)
- Load: `Catalog().dataset("MQ0uTWpmzXNyTWje0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-6cxrwlghsl1tzemd0000"></a>
## Mouse brain

- uid: `6cXrwLGhSl1tZemd0000`
- Page: /datasets/visium-spatial-gene-expression-brain-6cxrwlghsl1tzemd0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 2,116
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283959
- Publication: https://doi.org/10.1126/sciadv.adv5673
- Collections: [geo-gse283959](/collections/md/3.md#geo-gse283959)
- Load: `Catalog().dataset("6cXrwLGhSl1tZemd0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-kjyeakcsb2lgtjr40000"></a>
## Mouse spinal cord

- uid: `kjYEakcSb2LGtjr40000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-kjyeakcsb2lgtjr40000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Condition: spinal cord injury
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298545
- Publication: https://doi.org/10.1186/s12974-025-03494-4
- Collections: [geo-gse298545](/collections/md/7.md#geo-gse298545)
- Load: `Catalog().dataset("kjYEakcSb2LGtjr40000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-38uyctywivyxglef0000"></a>
## Human lung

- uid: `38uyctYwIVYxGLEF0000`
- Page: /datasets/visium-spatial-gene-expression-lung-38uyctywivyxglef0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: sarcoidosis
- Modality: RNA
- Observations (spots): 1,051
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE262998
- Collections: [geo-gse262998](/collections/md/a.md#geo-gse262998)
- Load: `Catalog().dataset("38uyctYwIVYxGLEF0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreatic-lymph-node-frimuaoyfnty1doc0000"></a>
## Human pancreatic lymph node

- uid: `frIMUAOyfNTy1doc0000`
- Page: /datasets/visium-spatial-gene-expression-pancreatic-lymph-node-frimuaoyfnty1doc0000/
- Technology: Visium
- Organism: human
- Tissue: pancreatic lymph node
- Modality: RNA
- Observations (spots): 1,637
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296626
- Publication: https://doi.org/10.1101/2025.05.19.654940
- Collections: [geo-gse296626](/collections/md/0.md#geo-gse296626)
- Load: `Catalog().dataset("frIMUAOyfNTy1doc0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-marrow-vwn9damlndl2rdv30000"></a>
## Mouse bone marrow

- uid: `vwN9DAMLndl2rDv30000`
- Page: /datasets/visium-spatial-gene-expression-bone-marrow-vwn9damlndl2rdv30000/
- Technology: Visium
- Organism: mouse
- Tissue: bone marrow
- Modality: RNA
- Observations (spots): 1,254
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269875
- Publication: https://doi.org/10.1111/acel.70475
- Collections: [geo-gse269875](/collections/md/4.md#geo-gse269875)
- Load: `Catalog().dataset("vwN9DAMLndl2rDv30000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-vzxi2ia2ehukc4zu0000"></a>
## Human lung

- uid: `VzxI2Ia2eHukc4zu0000`
- Page: /datasets/visium-spatial-gene-expression-lung-vzxi2ia2ehukc4zu0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: lung adenocarcinoma
- Modality: RNA
- Observations (spots): 3,230
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273378
- Publication: https://doi.org/10.1038/s41467-026-70600-2
- Collections: [geo-gse273378](/collections/md/2.md#geo-gse273378)
- Load: `Catalog().dataset("VzxI2Ia2eHukc4zu0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-tbh7vlqxlunvqoox0000"></a>
## Macaque basal ganglion

- uid: `tbh7VLQXlunVQOoX0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-tbh7vlqxlunvqoox0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 466
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("tbh7VLQXlunVQOoX0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-3ccknhukqzbexouk0000"></a>
## Human kidney

- uid: `3CCKNhukqzBexouK0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-3ccknhukqzbexouk0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 8,541
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2021-11-30_18h12m11s
- Load: `Catalog().dataset("3CCKNhukqzBexouK0000").to_sdata()`


<a id="mibi-tof-breast-ospynuig6bfwzagp0000"></a>
## Human breast

- uid: `ospYNUiG6bFWZaGP0000`
- Page: /datasets/mibi-tof-breast-ospynuig6bfwzagp0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,999
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("ospYNUiG6bFWZaGP0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-lmpxcgrkx7s4seu40000"></a>
## Human skin of body

- uid: `LMpxcGRKx7S4sEU40000`
- Page: /datasets/vizgen-merscope-skin-of-body-lmpxcgrkx7s4seu40000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 17,376
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("LMpxcGRKx7S4sEU40000").to_sdata()`


<a id="mibi-tof-lymph-node-uj7r3hoqbd1ibvtn0000"></a>
## Human lymph node

- uid: `Uj7R3hOqbD1Ibvtn0000`
- Page: /datasets/mibi-tof-lymph-node-uj7r3hoqbd1ibvtn0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,652
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("Uj7R3hOqbD1Ibvtn0000").to_sdata()`


<a id="10x-xenium-brain-yt5zxeog5iggwrou0000"></a>
## Human brain

- uid: `YT5ZxeOG5iGgWroU0000`
- Page: /datasets/10x-xenium-brain-yt5zxeog5iggwrou0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: breast carcinoma
- Modality: RNA
- Observations (cells): 386,809
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325935
- Load: `Catalog().dataset("YT5ZxeOG5iGgWroU0000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-7lucr7c0wtncpryy0000"></a>
## Human middle temporal gyrus

- uid: `7lUcR7c0WTNCPRYY0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-7lucr7c0wtncpryy0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Condition: Alzheimer disease
- Modality: RNA
- Observations (cells): 26,545
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("7lUcR7c0WTNCPRYY0000").to_sdata()`


<a id="vizgen-merscope-brain-x7hdhibjdxpjl3tg0000"></a>
## Mouse brain

- uid: `x7HDHIbjdXpjl3TG0000`
- Page: /datasets/vizgen-merscope-brain-x7hdhibjdxpjl3tg0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 377,651
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("x7HDHIbjdXpjl3TG0000").to_sdata()`


<a id="10x-xenium-brain-vt15musitnjcsp5c0000"></a>
## Human brain

- uid: `VT15mUSiTNjcsP5c0000`
- Page: /datasets/10x-xenium-brain-vt15musitnjcsp5c0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (cells): 15,316
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302502
- Publication: https://doi.org/10.1016/j.immuni.2025.09.018
- Load: `Catalog().dataset("VT15mUSiTNjcsP5c0000").to_sdata()`


<a id="merfish-brain-ium81iiphcowonsa0000"></a>
## Mouse brain

- uid: `iuM81iiPhCOwOnsA0000`
- Page: /datasets/merfish-brain-ium81iiphcowonsa0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 9,731
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("iuM81iiPhCOwOnsA0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-oumvjbmnd1ita6qa0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `oUMvjBMNd1ItA6QA0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-oumvjbmnd1ita6qa0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 59,787
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("oUMvjBMNd1ItA6QA0000").to_sdata()`


<a id="merfish-brain-v1uedgitjxlza7vd0000"></a>
## Mouse brain

- uid: `V1UeDGItJxLZa7VD0000`
- Page: /datasets/merfish-brain-v1uedgitjxlza7vd0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 21,243
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("V1UeDGItJxLZa7VD0000").to_sdata()`