# SpatialData-DB datasets, shard 5f

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-lung-k5q3yislrhtzfqfr0000"></a>
## Human lung

- uid: `k5Q3YIsLRHtzFqFR0000`
- Page: /datasets/visium-hd-lung-k5q3yislrhtzfqfr0000/
- Technology: Visium HD
- Organism: human
- Tissue: lung
- Condition: adenocarcinoma
- Modality: RNA
- Observations (bins): 448,109
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-gene-expression-human-lung-cancer-post-xenium-expt
- Load: `Catalog().dataset("k5Q3YIsLRHtzFqFR0000").to_sdata()`


<a id="visium-spatial-gene-expression-infrapatellar-fat-pad-hp1sxxzqypzerd040000"></a>
## Human infrapatellar fat pad

- uid: `HP1sXXzqypZerD040000`
- Page: /datasets/visium-spatial-gene-expression-infrapatellar-fat-pad-hp1sxxzqypzerd040000/
- Technology: Visium
- Organism: human
- Tissue: infrapatellar fat pad
- Condition: osteoarthritis, knee
- Modality: RNA
- Observations (spots): 2,675
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE253199
- Publication: https://doi.org/10.1136/ard-2024-225928
- Collections: [geo-gse253199](/collections/md/9.md#geo-gse253199)
- Load: `Catalog().dataset("HP1sXXzqypZerD040000").to_sdata()`


<a id="visium-spatial-gene-expression-inferior-parietal-cortex-phqw51cmgiyx1mkm0000"></a>
## Human inferior parietal cortex

- uid: `PhqW51CMGIyX1mKM0000`
- Page: /datasets/visium-spatial-gene-expression-inferior-parietal-cortex-phqw51cmgiyx1mkm0000/
- Technology: Visium
- Organism: human
- Tissue: inferior parietal cortex
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 13,299
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE263079
- Publication: https://doi.org/10.1038/s41591-025-03574-1
- Collections: [geo-gse263079](/collections/md/2.md#geo-gse263079)
- Load: `Catalog().dataset("PhqW51CMGIyX1mKM0000").to_sdata()`


<a id="visium-spatial-gene-expression-thymus-uckeld9lxzrnkwnd0000"></a>
## Mouse thymus

- uid: `UCKelD9LxzRnkWND0000`
- Page: /datasets/visium-spatial-gene-expression-thymus-uckeld9lxzrnkwnd0000/
- Technology: Visium
- Organism: mouse
- Tissue: thymus
- Condition: asthma
- Modality: RNA
- Observations (spots): 2,452
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE227332
- Publication: https://doi.org/10.1126/sciimmunol.adi9066
- Collections: [geo-gse227332](/collections/md/f.md#geo-gse227332)
- Load: `Catalog().dataset("UCKelD9LxzRnkWND0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-qcb7rqt7yumqtzjy0000"></a>
## Mouse spinal cord

- uid: `qCb7rqt7YUMqTzjY0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-qcb7rqt7yumqtzjy0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 310
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("qCb7rqt7YUMqTzjY0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-mfaptetwh4hvdvmf0000"></a>
## Mouse spinal cord

- uid: `MfApTeTwH4HvDvMF0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-mfaptetwh4hvdvmf0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 285
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("MfApTeTwH4HvDvMF0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-tjndqzne82nyhfng0000"></a>
## Human brain

- uid: `tjNdqZNe82nYhFng0000`
- Page: /datasets/visium-spatial-gene-expression-brain-tjndqzne82nyhfng0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 2,486
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE237183
- Publication: https://doi.org/10.1016/j.cell.2024.03.029
- Collections: [geo-gse237183](/collections/md/d.md#geo-gse237183)
- Load: `Catalog().dataset("tjNdqZNe82nYhFng0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-joighodrvcicfwp80000"></a>
## Human kidney

- uid: `joighODrVCICfWP80000`
- Page: /datasets/visium-spatial-gene-expression-kidney-joighodrvcicfwp80000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 469
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("joighODrVCICfWP80000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-juanavnk3vuzdmxe0000"></a>
## Mouse brain

- uid: `juanAvnk3vUzDMXe0000`
- Page: /datasets/visium-spatial-gene-expression-brain-juanavnk3vuzdmxe0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 3,440
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282203
- Publication: https://doi.org/10.64898/2026.01.26.701799
- Collections: [geo-gse282203](/collections/md/3.md#geo-gse282203)
- Load: `Catalog().dataset("juanAvnk3vUzDMXe0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-hercacfmnzhdfrii0000"></a>
## Mouse brain

- uid: `hErCACFmnzHdfRii0000`
- Page: /datasets/visium-spatial-gene-expression-brain-hercacfmnzhdfrii0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 2,620
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313407
- Publication: https://doi.org/10.1177/08977151251390528
- Collections: [geo-gse313407](/collections/md/3.md#geo-gse313407)
- Load: `Catalog().dataset("hErCACFmnzHdfRii0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-43smtc4mtkago6ex0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `43smTC4mtkaGo6Ex0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-43smtc4mtkago6ex0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: bipolar disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("43smTC4mtkaGo6Ex0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-meivl7xyjbaniqkw0000"></a>
## Mouse spleen

- uid: `MEivL7XYjbaNiQkw0000`
- Page: /datasets/visium-spatial-gene-expression-spleen-meivl7xyjbaniqkw0000/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Modality: RNA
- Observations (spots): 973
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("MEivL7XYjbaNiQkw0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-a0xms5y6kjhvnda80000"></a>
## Human kidney

- uid: `a0Xms5Y6KJhvndA80000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-a0xms5y6kjhvnda80000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 16,632
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2020-12-04_18h37m03s
- Load: `Catalog().dataset("a0Xms5Y6KJhvndA80000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-7vkwwwqsclyg7yss0000"></a>
## Mouse spleen

- uid: `7VkwWwqSCLYg7ySs0000`
- Page: /datasets/visium-spatial-gene-expression-spleen-7vkwwwqsclyg7yss0000/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Modality: RNA
- Observations (spots): 884
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("7VkwWwqSCLYg7ySs0000").to_sdata()`


<a id="10x-xenium-lung-nyslnbkdg2edzdrh0000"></a>
## Human lung

- uid: `NysLnBkdG2EdzdRh0000`
- Page: /datasets/10x-xenium-lung-nyslnbkdg2edzdrh0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (cells): 14,187
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334763
- Publication: https://doi.org/10.1126/sciimmunol.aeb6645
- Load: `Catalog().dataset("NysLnBkdG2EdzdRh0000").to_sdata()`


<a id="visium-spatial-gene-expression-gray-matter-ehxqpyyqajjr7sma0000"></a>
## Human gray matter

- uid: `ehXQPyYQaJJr7SmA0000`
- Page: /datasets/visium-spatial-gene-expression-gray-matter-ehxqpyyqajjr7sma0000/
- Technology: Visium
- Organism: human
- Tissue: gray matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (spots): 3,167
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6368818
- Collections: [geo-gse208747](/collections/md/d.md#geo-gse208747)
- Load: `Catalog().dataset("ehXQPyYQaJJr7SmA0000").to_sdata()`


<a id="10x-xenium-brain-etgvt7rexeeotjdx0000"></a>
## Human brain

- uid: `etGvT7RExeeOTjDX0000`
- Page: /datasets/10x-xenium-brain-etgvt7rexeeotjdx0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: medulloblastoma
- Modality: RNA
- Observations (cells): 133,986
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE291688
- Publication: https://doi.org/10.1186/s13059-025-03624-4
- Load: `Catalog().dataset("etGvT7RExeeOTjDX0000").to_sdata()`


<a id="stereo-seq-thymus-agqlwid0nomkpquc0000"></a>
## Human thymus

- uid: `aGQlwId0nomkPQUC0000`
- Page: /datasets/stereo-seq-thymus-agqlwid0nomkpquc0000/
- Technology: Stereo-seq
- Organism: human
- Tissue: thymus
- Modality: RNA
- Observations: 111,137
- Licence: CC BY 4.0
- Source: https://zenodo.org/records/12595241
- Collections: [zenodo-12595241](/collections/md/4.md#zenodo-12595241)
- Load: `Catalog().dataset("aGQlwId0nomkPQUC0000").to_sdata()`


<a id="10x-xenium-skin-of-body-wu2htkzzsbklu57c0000"></a>
## Human skin of body

- uid: `wu2hTkZzsbKLu57c0000`
- Page: /datasets/10x-xenium-skin-of-body-wu2htkzzsbklu57c0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (cells): 86,282
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE316387
- Load: `Catalog().dataset("wu2hTkZzsbKLu57c0000").to_sdata()`


<a id="mibi-tof-breast-l32jexugz5gkjv560000"></a>
## Human breast

- uid: `l32jEXUGz5GkJv560000`
- Page: /datasets/mibi-tof-breast-l32jexugz5gkjv560000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,335
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("l32jEXUGz5GkJv560000").to_sdata()`


<a id="10x-xenium-subcutaneous-adipose-tissue-3xdpfcmcczionojr0000"></a>
## Human subcutaneous adipose tissue

- uid: `3XdpFcMccZIoNOjr0000`
- Page: /datasets/10x-xenium-subcutaneous-adipose-tissue-3xdpfcmcczionojr0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: subcutaneous adipose tissue
- Condition: obesity disorder
- Modality: RNA
- Observations (cells): 7,898
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295862
- Publication: https://doi.org/10.1038/s41586-025-09233-2
- Load: `Catalog().dataset("3XdpFcMccZIoNOjr0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-y1zovehhyxyz1jjz0000"></a>
## Mouse kidney

- uid: `Y1zovEHhyxYz1JjZ0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-y1zovehhyxyz1jjz0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: kidney
- Modality: Metabolomics
- Observations: 14,625
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-07-24_00h05m07s
- Load: `Catalog().dataset("Y1zovEHhyxYz1JjZ0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-lung-n8jaunb8xt7byezr0000"></a>
## Human lung

- uid: `n8jaUNB8xt7BYEZR0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-lung-n8jaunb8xt7byezr0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: lung
- Condition: cancer
- Modality: Metabolomics
- Observations: 342,453
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-06-01_22h00m02s
- Publication: https://doi.org/10.1038/s41598-023-50957-w
- Load: `Catalog().dataset("n8jaUNB8xt7BYEZR0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-pjcjqufgsa09tinj0000"></a>
## Human lymph node

- uid: `PjCJquFgSa09TInJ0000`
- Page: /datasets/phenocycler-fusion-lymph-node-pjcjqufgsa09tinj0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: Burkitt lymphoma
- Modality: protein
- Observations (cells): 8,071
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("PjCJquFgSa09TInJ0000").to_sdata()`


<a id="10x-xenium-brain-w1acw7hqyze672fg0000"></a>
## Human brain

- uid: `W1AcW7hqyze672Fg0000`
- Page: /datasets/10x-xenium-brain-w1acw7hqyze672fg0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (cells): 4,394
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302502
- Publication: https://doi.org/10.1016/j.immuni.2025.09.018
- Load: `Catalog().dataset("W1AcW7hqyze672Fg0000").to_sdata()`