# SpatialData-DB datasets, shard 5c

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-entorhinal-cortex-alqteyisrnzzoip50000"></a>
## Human entorhinal cortex

- uid: `AlqTeYiSRNzzoiP50000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-alqteyisrnzzoip50000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("AlqTeYiSRNzzoiP50000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-nlnqtxrjahzd4qgg0000"></a>
## Human colon

- uid: `nlnQtxRJaHzD4QGg0000`
- Page: /datasets/visium-spatial-gene-expression-colon-nlnqtxrjahzd4qgg0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 11,743
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312204
- Publication: https://doi.org/10.1038/s41467-026-71944-5
- Collections: [geo-gse312204](/collections/md/4.md#geo-gse312204)
- Load: `Catalog().dataset("nlnQtxRJaHzD4QGg0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-bzvfnosh4qogk1wj0000"></a>
## Human colon

- uid: `bZvfnosh4QOGK1WJ0000`
- Page: /datasets/visium-spatial-gene-expression-colon-bzvfnosh4qogk1wj0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 7,139
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312204
- Publication: https://doi.org/10.1038/s41467-026-71944-5
- Collections: [geo-gse312204](/collections/md/4.md#geo-gse312204)
- Load: `Catalog().dataset("bZvfnosh4QOGK1WJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-m4pqapepfldrmoqb0000"></a>
## Mouse brain

- uid: `M4PQapEpfldrmoqB0000`
- Page: /datasets/visium-spatial-gene-expression-brain-m4pqapepfldrmoqb0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,913
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41587-023-01937-y
- Publication: https://doi.org/10.1038/s41587-023-01937-y
- Collections: [doi-10-1038-s41587-023-01937-y](/collections/md/b.md#doi-10-1038-s41587-023-01937-y)
- Load: `Catalog().dataset("M4PQapEpfldrmoqB0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-u8asqicmrdeufkbk0000"></a>
## Human brain

- uid: `u8ASQiCmRdEUfkBK0000`
- Page: /datasets/visium-spatial-gene-expression-brain-u8asqicmrdeufkbk0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (spots): 2,236
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://academic.oup.com/neuro-oncology/article/24/Supplement_1/i45/6600572
- Publication: https://doi.org/10.1093/neuonc/noac079.165
- Collections: [doi-10-1093-neuonc-noac079-165](/collections/md/6.md#doi-10-1093-neuonc-noac079-165)
- Load: `Catalog().dataset("u8ASQiCmRdEUfkBK0000").to_sdata()`


<a id="visium-spatial-gene-expression-placenta-t7vmo6d3pbaiqo8w0000"></a>
## Human placenta

- uid: `T7vMO6D3pBAiQO8W0000`
- Page: /datasets/visium-spatial-gene-expression-placenta-t7vmo6d3pbaiqo8w0000/
- Technology: Visium
- Organism: human
- Tissue: placenta
- Condition: COVID-19
- Modality: RNA
- Observations (spots): 669
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/37423216/
- Publication: https://doi.org/10.1016/j.medj.2023.06.003
- Collections: [doi-10-1016-j-medj-2023-06-003](/collections/md/6.md#doi-10-1016-j-medj-2023-06-003)
- Load: `Catalog().dataset("T7vMO6D3pBAiQO8W0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-zu5tpbwwrif36xvi0000"></a>
## Human pancreas

- uid: `ZU5tPBwWriF36xvi0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-zu5tpbwwrif36xvi0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: type 1 diabetes mellitus
- Modality: RNA
- Observations (spots): 5,310
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296626
- Publication: https://doi.org/10.1101/2025.05.19.654940
- Collections: [geo-gse296626](/collections/md/0.md#geo-gse296626)
- Load: `Catalog().dataset("ZU5tPBwWriF36xvi0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-lunpk2f1ef1ysuvn0000"></a>
## Human pancreas

- uid: `LuNPk2F1EF1ySUvN0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-lunpk2f1ef1ysuvn0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Modality: RNA
- Observations (spots): 7,898
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296626
- Publication: https://doi.org/10.1101/2025.05.19.654940
- Collections: [geo-gse296626](/collections/md/0.md#geo-gse296626)
- Load: `Catalog().dataset("LuNPk2F1EF1ySUvN0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-ceosqaylopcenxn20000"></a>
## Human liver

- uid: `CEOsqaylopcEnXN20000`
- Page: /datasets/visium-spatial-gene-expression-liver-ceosqaylopcenxn20000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 1,310
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281759
- Publication: https://doi.org/10.1016/j.jhepr.2026.101790
- Collections: [geo-gse281759](/collections/md/3.md#geo-gse281759)
- Load: `Catalog().dataset("CEOsqaylopcEnXN20000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-srvn5yuqvbfymrhl0000"></a>
## Human pancreas

- uid: `sRvN5yuQVBFyMrhl0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-srvn5yuqvbfymrhl0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,649
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("sRvN5yuQVBFyMrhl0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-nw5d4zzndxfmt1t70000"></a>
## Human dorsolateral prefrontal cortex

- uid: `NW5d4zzndxfmt1t70000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-nw5d4zzndxfmt1t70000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("NW5d4zzndxfmt1t70000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-2aduuq0vx08jxtko0000"></a>
## Mouse brain

- uid: `2aDuuq0VX08jxTkO0000`
- Page: /datasets/visium-spatial-gene-expression-brain-2aduuq0vx08jxtko0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: glioma
- Modality: RNA
- Observations (spots): 2,301
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE272236
- Publication: https://doi.org/10.1038/s41467-025-66985-1
- Collections: [geo-gse272236](/collections/md/8.md#geo-gse272236)
- Load: `Catalog().dataset("2aDuuq0VX08jxTkO0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-kgy9kgqasvwk6hm10000"></a>
## Mouse lung

- uid: `KGy9kgqAsVWk6Hm10000`
- Page: /datasets/visium-spatial-gene-expression-lung-kgy9kgqasvwk6hm10000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: malaria
- Modality: RNA
- Observations (spots): 4,222
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("KGy9kgqAsVWk6Hm10000").to_sdata()`


<a id="visium-spatial-gene-expression-thyroid-gland-ok3svb53t1zckr4f0000"></a>
## Human thyroid gland

- uid: `oK3svb53t1zckr4f0000`
- Page: /datasets/visium-spatial-gene-expression-thyroid-gland-ok3svb53t1zckr4f0000/
- Technology: Visium
- Organism: human
- Tissue: thyroid gland
- Condition: thyroid gland carcinoma
- Modality: RNA
- Observations (spots): 2,270
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250521
- Collections: [geo-gse250521](/collections/md/5.md#geo-gse250521)
- Load: `Catalog().dataset("oK3svb53t1zckr4f0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-ki6r6odt2c8xc9em0000"></a>
## Human lung

- uid: `Ki6r6odT2c8xc9em0000`
- Page: /datasets/visium-spatial-gene-expression-lung-ki6r6odt2c8xc9em0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: sarcoidosis
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288607
- Collections: [geo-gse288607](/collections/md/6.md#geo-gse288607)
- Load: `Catalog().dataset("Ki6r6odT2c8xc9em0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-45u4puvdc6py4z1n0000"></a>
## Mouse liver

- uid: `45u4PUvDC6py4z1N0000`
- Page: /datasets/visium-spatial-gene-expression-liver-45u4puvdc6py4z1n0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: alcoholic liver diseases
- Modality: RNA
- Observations (spots): 1,646
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320442
- Collections: [geo-gse320442](/collections/md/7.md#geo-gse320442)
- Load: `Catalog().dataset("45u4PUvDC6py4z1N0000").to_sdata()`


<a id="10x-xenium-heart-ztwjigotrixxos8j0000"></a>
## Human heart

- uid: `ZtwJiGoTrIXxOS8j0000`
- Page: /datasets/10x-xenium-heart-ztwjigotrixxos8j0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: heart
- Condition: heart failure
- Modality: RNA
- Observations (cells): 17,824
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310386
- Load: `Catalog().dataset("ZtwJiGoTrIXxOS8j0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-se4pa2aaf47roewn0000"></a>
## Human liver

- uid: `SE4pA2AAf47rOEwN0000`
- Page: /datasets/visium-spatial-gene-expression-liver-se4pa2aaf47roewn0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatoblastoma
- Modality: RNA
- Observations (spots): 4,644
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283207
- Publication: https://doi.org/10.1016/j.jhep.2025.01.031
- Collections: [geo-gse261958](/collections/md/b.md#geo-gse261958)
- Load: `Catalog().dataset("SE4pA2AAf47rOEwN0000").to_sdata()`


<a id="visium-spatial-gene-expression-unknown-k0xftyric0zmxvdh0000"></a>
## Human unknown

- uid: `K0xFTYriC0zmxvDh0000`
- Page: /datasets/visium-spatial-gene-expression-unknown-k0xftyric0zmxvdh0000/
- Technology: Visium
- Organism: human
- Tissue: unknown
- Condition: diffuse large B-cell lymphoma
- Modality: RNA
- Observations (spots): 7,704
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9980521
- Collections: [geo-gse344506](/collections/md/1.md#geo-gse344506)
- Load: `Catalog().dataset("K0xFTYriC0zmxvDh0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-1eqvfeqjqifuhfkz0000"></a>
## Human pancreas

- uid: `1eqvfeQjQIFUHFkz0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-1eqvfeqjqifuhfkz0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,577
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("1eqvfeQjQIFUHFkz0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-hhkczlwtamlbjcyw0000"></a>
## Human brain

- uid: `hHKCZLwTAMLBjcYw0000`
- Page: /datasets/visium-spatial-gene-expression-brain-hhkczlwtamlbjcyw0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 1,787
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9497624
- Collections: [geo-gse318562](/collections/md/3.md#geo-gse318562)
- Load: `Catalog().dataset("hHKCZLwTAMLBjcYw0000").to_sdata()`


<a id="mibi-tof-breast-tzwlbfpd11oi5lpf0000"></a>
## Human breast

- uid: `tzwlbFPd11Oi5lPF0000`
- Page: /datasets/mibi-tof-breast-tzwlbfpd11oi5lpf0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,278
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("tzwlbFPd11Oi5lPF0000").to_sdata()`


<a id="mibi-tof-breast-2tqyaar7otzcg1ie0000"></a>
## Human breast

- uid: `2TQYAAr7oTZcG1ie0000`
- Page: /datasets/mibi-tof-breast-2tqyaar7otzcg1ie0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,983
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("2TQYAAr7oTZcG1ie0000").to_sdata()`


<a id="vizgen-merscope-brain-bmy8wbocrryrc0an0000"></a>
## Mouse brain

- uid: `Bmy8wBOCrrYrc0AN0000`
- Page: /datasets/vizgen-merscope-brain-bmy8wbocrryrc0an0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 274,235
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("Bmy8wBOCrrYrc0AN0000").to_sdata()`


<a id="10x-xenium-ileum-wdgjhlocxfofaqhs0000"></a>
## Human ileum

- uid: `WDgjHLOcxFofaqHS0000`
- Page: /datasets/10x-xenium-ileum-wdgjhlocxfofaqhs0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: ileum
- Condition: Crohn disease
- Modality: RNA
- Observations (cells): 39,289
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312420
- Publication: https://doi.org/10.1038/s41467-026-72482-w
- Load: `Catalog().dataset("WDgjHLOcxFofaqHS0000").to_sdata()`


<a id="stereo-seq-prefrontal-cortex-p0oi3cjguoooebx90000"></a>
## Human prefrontal cortex

- uid: `P0oI3CJGuoooEbx90000`
- Page: /datasets/stereo-seq-prefrontal-cortex-p0oi3cjguoooebx90000/
- Technology: Stereo-seq
- Organism: human
- Tissue: prefrontal cortex
- Modality: RNA
- Observations: 82,056
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269906
- Collections: [geo-gse269906](/collections/md/5.md#geo-gse269906)
- Load: `Catalog().dataset("P0oI3CJGuoooEbx90000").to_sdata()`


<a id="mibi-tof-breast-a5ptkwhprmfbrdjq0000"></a>
## Human breast

- uid: `a5PtkWhPRmfbrDjq0000`
- Page: /datasets/mibi-tof-breast-a5ptkwhprmfbrdjq0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,438
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("a5PtkWhPRmfbrDjq0000").to_sdata()`


<a id="vizgen-merscope-brain-sunumdraaki4pxzl0000"></a>
## Mouse brain

- uid: `suNuMDraaKi4pXzl0000`
- Page: /datasets/vizgen-merscope-brain-sunumdraaki4pxzl0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 17,277
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("suNuMDraaKi4pXzl0000").to_sdata()`


<a id="vizgen-merscope-brain-kcxtx7tl65hszlor0000"></a>
## Mouse brain

- uid: `KcXtX7Tl65hsZloR0000`
- Page: /datasets/vizgen-merscope-brain-kcxtx7tl65hszlor0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 13,684
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("KcXtX7Tl65hsZloR0000").to_sdata()`


<a id="mibi-tof-lymph-node-2vtucuyrkme6iskh0000"></a>
## Human lymph node

- uid: `2vTUCuYrkmE6Iskh0000`
- Page: /datasets/mibi-tof-lymph-node-2vtucuyrkme6iskh0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,086
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("2vTUCuYrkmE6Iskh0000").to_sdata()`


<a id="10x-xenium-nucleus-accumbens-jgjmrsph60wrq9sv0000"></a>
## Human nucleus accumbens

- uid: `jgjmrsPH60wrq9SV0000`
- Page: /datasets/10x-xenium-nucleus-accumbens-jgjmrsph60wrq9sv0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: nucleus accumbens
- Modality: RNA
- Observations (cells): 228,127
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325489
- Publication: https://doi.org/10.1016/j.neuron.2026.06.002
- Load: `Catalog().dataset("jgjmrsPH60wrq9SV0000").to_sdata()`


<a id="vizgen-merscope-brain-sitwadhc3p55ep1n0000"></a>
## Mouse brain

- uid: `sItWAdhc3p55Ep1n0000`
- Page: /datasets/vizgen-merscope-brain-sitwadhc3p55ep1n0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 9,513
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("sItWAdhc3p55Ep1n0000").to_sdata()`