# SpatialData-DB datasets, shard 53

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-placenta-2rsknt0ogvbatjda0000"></a>
## Mouse placenta

- uid: `2rskNt0OGvBATJDA0000`
- Page: /datasets/visium-spatial-gene-expression-placenta-2rsknt0ogvbatjda0000/
- Technology: Visium
- Organism: mouse
- Tissue: placenta
- Modality: RNA
- Observations (spots): 1,237
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333401
- Publication: https://doi.org/10.64898/2026.07.11.732137
- Collections: [geo-gse333401](/collections/md/5.md#geo-gse333401)
- Load: `Catalog().dataset("2rskNt0OGvBATJDA0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-woya28miabjise2f0000"></a>
## Mouse spinal cord

- uid: `WoYA28MiabjISe2F0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-woya28miabjise2f0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 251
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("WoYA28MiabjISe2F0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-vpnsjlpbfylwnxhc0000"></a>
## Human liver

- uid: `VPnSjLpbfyLwnXHc0000`
- Page: /datasets/visium-spatial-gene-expression-liver-vpnsjlpbfylwnxhc0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 1,987
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.biorxiv.org/content/10.1101/2022.11.09.515839v1.full
- Publication: https://doi.org/10.1101/2022.11.09.515839
- Collections: [doi-10-1101-2022-11-09-515839](/collections/md/2.md#doi-10-1101-2022-11-09-515839)
- Load: `Catalog().dataset("VPnSjLpbfyLwnXHc0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-hdnamywnmdxy56x80000"></a>
## Mouse spinal cord

- uid: `HdnAMYWnMdXy56x80000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-hdnamywnmdxy56x80000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 221
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("HdnAMYWnMdXy56x80000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-kniuuo356eheez3q0000"></a>
## Mouse brain

- uid: `kNIuuO356EHeEZ3Q0000`
- Page: /datasets/visium-spatial-gene-expression-brain-kniuuo356eheez3q0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,426
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-023-36071-5
- Publication: https://doi.org/10.1038/s41467-023-36071-5
- Collections: [doi-10-1038-s41467-023-36071-5](/collections/md/9.md#doi-10-1038-s41467-023-36071-5)
- Load: `Catalog().dataset("kNIuuO356EHeEZ3Q0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-8dckcie4zyqr6rch0000"></a>
## Mouse brain

- uid: `8DckCIE4zyQR6RCH0000`
- Page: /datasets/visium-spatial-gene-expression-brain-8dckcie4zyqr6rch0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,804
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/37591239/
- Publication: https://doi.org/10.1016/j.cell.2023.07.027
- Collections: [doi-10-1016-j-cell-2023-07-027](/collections/md/e.md#doi-10-1016-j-cell-2023-07-027)
- Load: `Catalog().dataset("8DckCIE4zyQR6RCH0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-tpzrvio6z8z6gzsd0000"></a>
## Mouse spinal cord

- uid: `TPZRVIO6z8Z6GzsD0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-tpzrvio6z8z6gzsd0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 219
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("TPZRVIO6z8Z6GzsD0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-ypq6zf2auycbchqc0000"></a>
## Human heart

- uid: `ypq6ZF2auyCBchQc0000`
- Page: /datasets/visium-spatial-gene-expression-heart-ypq6zf2auycbchqc0000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 3,400
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("ypq6ZF2auyCBchQc0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-pibnoub3tsabjpac0000"></a>
## Human skin of body

- uid: `pibNOUb3tsaBJPaC0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-pibnoub3tsabjpac0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: lichen planus
- Modality: RNA
- Observations (spots): 1,122
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("pibNOUb3tsaBJPaC0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-4jffvgye7kr0c13n0000"></a>
## Human skin of body

- uid: `4JffvGye7kR0C13N0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-4jffvgye7kr0c13n0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: psoriasis
- Modality: RNA
- Observations (spots): 777
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-022-35319-w
- Publication: https://doi.org/10.1038/s41467-022-35319-w
- Collections: [doi-10-1038-s41467-022-35319-w](/collections/md/f.md#doi-10-1038-s41467-022-35319-w)
- Load: `Catalog().dataset("4JffvGye7kR0C13N0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-l7ymkmd2lvlqctqn0000"></a>
## Human prostate gland

- uid: `L7ymkMD2lVLQcTqn0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-l7ymkmd2lvlqctqn0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 2,099
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("L7ymkMD2lVLQcTqn0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-iyezb6xyrql0mgjd0000"></a>
## Mouse spinal cord

- uid: `IyeZB6XYrQL0mgJD0000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-iyezb6xyrql0mgjd0000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Condition: spinal cord injury
- Modality: RNA
- Observations (spots): 1,500
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE256397
- Publication: https://doi.org/10.1016/j.devcel.2024.06.016
- Collections: [geo-gse256397](/collections/md/3.md#geo-gse256397)
- Load: `Catalog().dataset("IyeZB6XYrQL0mgJD0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-v8ep6exit0amqzv50000"></a>
## Mouse brain

- uid: `V8eP6ExiT0aMQZv50000`
- Page: /datasets/visium-spatial-gene-expression-brain-v8ep6exit0amqzv50000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: malaria
- Modality: RNA
- Observations (spots): 3,613
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("V8eP6ExiT0aMQZv50000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-d7fpjwbnpcsm9qy40000"></a>
## Mouse lung

- uid: `D7fPjWBNPCsm9qY40000`
- Page: /datasets/visium-spatial-gene-expression-lung-d7fpjwbnpcsm9qy40000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Modality: RNA
- Observations (spots): 3,200
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("D7fPjWBNPCsm9qY40000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-jqcy69trsx5djoy30000"></a>
## Mouse brain

- uid: `jQCY69trSX5dJoy30000`
- Page: /datasets/visium-spatial-gene-expression-brain-jqcy69trsx5djoy30000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 2,824
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313407
- Publication: https://doi.org/10.1177/08977151251390528
- Collections: [geo-gse313407](/collections/md/3.md#geo-gse313407)
- Load: `Catalog().dataset("jQCY69trSX5dJoy30000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-5lcjntonycz0g3c80000"></a>
## Human skin of body

- uid: `5LcjNtONyCZ0G3c80000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-5lcjntonycz0g3c80000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: hidradenitis suppurativa
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE346090
- Collections: [geo-gse346090](/collections/md/a.md#geo-gse346090)
- Load: `Catalog().dataset("5LcjNtONyCZ0G3c80000").to_sdata()`


<a id="10x-xenium-breast-ypn7hojfu3jihgks0001"></a>
## Human breast

- uid: `yPN7hOjFU3JihgKS0001`
- Page: /datasets/10x-xenium-breast-ypn7hojfu3jihgks0001/
- Technology: 10x Xenium
- Organism: human
- Tissue: breast
- Modality: RNA
- Observations (cells): 192,898
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/xenium-ffpe-human-breast-biomarkers
- Collections: [10x-xenium-ffpe-human-breast-biomarkers](/collections/md/3.md#10x-xenium-ffpe-human-breast-biomarkers)
- Load: `Catalog().dataset("yPN7hOjFU3JihgKS0001").to_sdata()`


<a id="visium-spatial-gene-expression-liver-rpugx9pecwlwckhi0000"></a>
## Mouse liver

- uid: `RPUgx9pECWlwCkhi0000`
- Page: /datasets/visium-spatial-gene-expression-liver-rpugx9pecwlwckhi0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: metabolic dysfunction-associated steatohepatitis
- Modality: RNA
- Observations (spots): 2,134
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE248077
- Collections: [geo-gse248077](/collections/md/f.md#geo-gse248077)
- Load: `Catalog().dataset("RPUgx9pECWlwCkhi0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-67uuu6ovgeooruv90000"></a>
## Mouse heart

- uid: `67uUu6oVGEooRUV90000`
- Page: /datasets/visium-spatial-gene-expression-heart-67uuu6ovgeooruv90000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Condition: myocardial infarction
- Modality: RNA
- Observations (spots): 1,569
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5943196
- Collections: [geo-gse176092](/collections/md/0.md#geo-gse176092)
- Load: `Catalog().dataset("67uUu6oVGEooRUV90000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-sqmtrebdbhpvnztm0000"></a>
## Human brain

- uid: `sqmtreBdBHPVNZTM0000`
- Page: /datasets/visium-spatial-gene-expression-brain-sqmtrebdbhpvnztm0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (spots): 8,458
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8855703
- Collections: [geo-gse292299](/collections/md/c.md#geo-gse292299)
- Load: `Catalog().dataset("sqmtreBdBHPVNZTM0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-peq7poofcc1d0efw0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `peq7POOfcC1D0efW0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-peq7poofcc1d0efw0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("peq7POOfcC1D0efW0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-fdzyemeixwqjiqjb0000"></a>
## Mouse brain

- uid: `FDZYemeixwQjiqjb0000`
- Page: /datasets/visium-spatial-gene-expression-brain-fdzyemeixwqjiqjb0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,667
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("FDZYemeixwQjiqjb0000").to_sdata()`


<a id="merfish-brain-gj9m4qzblmbc1qfx0000"></a>
## Mouse brain

- uid: `gj9M4qzbLmbc1QFx0000`
- Page: /datasets/merfish-brain-gj9m4qzblmbc1qfx0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 12,610
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("gj9M4qzbLmbc1QFx0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-ilnocsnhvjlwwsnc0000"></a>
## Macaque basal ganglion

- uid: `iLNOcsnHVJLwWsNC0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-ilnocsnhvjlwwsnc0000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 90,527
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("iLNOcsnHVJLwWsNC0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-lung-dnexoty6trlyge7f0000"></a>
## Human lung

- uid: `dneXOTy6tRlYgE7F0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-lung-dnexoty6trlyge7f0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: lung
- Modality: Metabolomics
- Observations: 46,920
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2024-01-05_03h27m19s
- Load: `Catalog().dataset("dneXOTy6tRlYgE7F0000").to_sdata()`


<a id="stereo-seq-brain-pscs4urz4cgknqqn0000"></a>
## Mouse brain

- uid: `PsCs4UrZ4CgKnQQn0000`
- Page: /datasets/stereo-seq-brain-pscs4urz4cgknqqn0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations: 123,921
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274447
- Collections: [geo-gse274447](/collections/md/9.md#geo-gse274447)
- Load: `Catalog().dataset("PsCs4UrZ4CgKnQQn0000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-ajgs1iei9r1torwy0000"></a>
## Human middle temporal gyrus

- uid: `aJgs1IEI9r1ToRwY0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-ajgs1iei9r1torwy0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Condition: Alzheimer disease
- Modality: RNA
- Observations (cells): 17,447
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("aJgs1IEI9r1ToRwY0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-jyiwmka5duylmlwh0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `jYIwmKA5DuYlmLwh0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-jyiwmka5duylmlwh0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 47,384
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("jYIwmKA5DuYlmLwh0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-3aa3pfbm52a3wvs40000"></a>
## Human kidney

- uid: `3Aa3PFBm52a3wVs40000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-3aa3pfbm52a3wvs40000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 2,352
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-08-21_21h36m51s
- Load: `Catalog().dataset("3Aa3PFBm52a3wVs40000").to_sdata()`