# SpatialData-DB datasets, shard 51

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-q1lhhemmhgbht0qx0000"></a>
## Mouse brain

- uid: `q1LHhEMMhGBHt0qx0000`
- Page: /datasets/visium-spatial-gene-expression-brain-q1lhhemmhgbht0qx0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,924
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE249403
- Publication: https://doi.org/10.1038/s41593-026-02420-y
- Collections: [geo-gse249403](/collections/md/9.md#geo-gse249403)
- Load: `Catalog().dataset("q1LHhEMMhGBHt0qx0000").to_sdata()`


<a id="spatial-transcriptomics-brain-vqtdgbwnckeoqopz0000"></a>
## Mouse brain

- uid: `vQtDgbwNCkEOQoPz0000`
- Page: /datasets/spatial-transcriptomics-brain-vqtdgbwnckeoqopz0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 461
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("vQtDgbwNCkEOQoPz0000").to_sdata()`


<a id="visium-spatial-gene-expression-embryo-hzhyluhxqu4ig38m0004"></a>
## Mouse embryo

- uid: `hZhYluHxQu4Ig38m0004`
- Page: /datasets/visium-spatial-gene-expression-embryo-hzhyluhxqu4ig38m0004/
- Technology: Visium
- Organism: mouse
- Tissue: embryo
- Modality: RNA
- Observations (spots): 6,434
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-cytassist-mouse-embryo-11-mm-capture-area-ffpe-2-standard
- Load: `Catalog().dataset("hZhYluHxQu4Ig38m0004").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-8bswdpcgh6waach90000"></a>
## Mouse spinal cord

- uid: `8BswDPcgH6waacH90000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-8bswdpcgh6waach90000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 238
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("8BswDPcgH6waacH90000").to_sdata()`


<a id="visium-spatial-gene-expression-ilium-hd8k1dlebowzlvgp0000"></a>
## Human ilium

- uid: `Hd8K1DlebOWzLvGP0000`
- Page: /datasets/visium-spatial-gene-expression-ilium-hd8k1dlebowzlvgp0000/
- Technology: Visium
- Organism: human
- Tissue: ilium
- Modality: RNA
- Observations (spots): 478
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281317
- Publication: https://doi.org/10.1038/s41586-025-09399-9
- Collections: [geo-gse281317](/collections/md/6.md#geo-gse281317)
- Load: `Catalog().dataset("Hd8K1DlebOWzLvGP0000").to_sdata()`


<a id="visium-spatial-gene-expression-mammary-gland-sts7i0syfeisih880000"></a>
## Rat mammary gland

- uid: `sTS7i0syFeiSIh880000`
- Page: /datasets/visium-spatial-gene-expression-mammary-gland-sts7i0syfeisih880000/
- Technology: Visium
- Organism: rat
- Tissue: mammary gland
- Condition: breast carcinoma
- Modality: RNA
- Observations (spots): 2,912
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE253585
- Publication: https://doi.org/10.1016/j.ccell.2026.03.015
- Collections: [geo-gse253585](/collections/md/8.md#geo-gse253585)
- Load: `Catalog().dataset("sTS7i0syFeiSIh880000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-iyrj3lvmwvdomhsd0001"></a>
## Human skin of body

- uid: `iyrJ3lvmwvDoMHSd0001`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-iyrj3lvmwvdomhsd0001/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 544
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE317987
- Publication: https://doi.org/10.3389/fimmu.2026.1870524
- Collections: [geo-gse317987](/collections/md/a.md#geo-gse317987)
- Load: `Catalog().dataset("iyrJ3lvmwvDoMHSd0001").to_sdata()`


<a id="visium-spatial-gene-expression-brain-fhtdiasilcp9dozo0000"></a>
## Mouse brain

- uid: `fHTdIASIlcp9DOZO0000`
- Page: /datasets/visium-spatial-gene-expression-brain-fhtdiasilcp9dozo0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,338
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282203
- Publication: https://doi.org/10.64898/2026.01.26.701799
- Collections: [geo-gse282203](/collections/md/3.md#geo-gse282203)
- Load: `Catalog().dataset("fHTdIASIlcp9DOZO0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-u4z6zqy5vkttyegx0000"></a>
## Mouse heart

- uid: `u4z6zqY5vKtTYEGX0000`
- Page: /datasets/visium-spatial-gene-expression-heart-u4z6zqy5vkttyegx0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Condition: heart failure
- Modality: RNA
- Observations (spots): 924
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319842
- Publication: https://doi.org/10.1158/2767-9764.CRC-25-0511
- Collections: [geo-gse319842](/collections/md/8.md#geo-gse319842)
- Load: `Catalog().dataset("u4z6zqY5vKtTYEGX0000").to_sdata()`


<a id="visium-spatial-gene-expression-olfactory-bulb-mzr2n2zjlvnqrdx50000"></a>
## Mouse olfactory bulb

- uid: `mZr2n2ZJLvNqrDX50000`
- Page: /datasets/visium-spatial-gene-expression-olfactory-bulb-mzr2n2zjlvnqrdx50000/
- Technology: Visium
- Organism: mouse
- Tissue: olfactory bulb
- Modality: RNA
- Observations (spots): 538
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("mZr2n2ZJLvNqrDX50000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-f2imzuavxichgxcx0000"></a>
## Human lung

- uid: `f2imzUAVXiCHGXcX0000`
- Page: /datasets/visium-spatial-gene-expression-lung-f2imzuavxichgxcx0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 3,190
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310610
- Publication: https://doi.org/10.1038/s41598-025-34594-z
- Collections: [geo-gse310610](/collections/md/9.md#geo-gse310610)
- Load: `Catalog().dataset("f2imzUAVXiCHGXcX0000").to_sdata()`


<a id="10x-xenium-skin-of-body-geobkcog0fpkv3os0000"></a>
## Mouse skin of body

- uid: `GeObkcoG0FpkV3OS0000`
- Page: /datasets/10x-xenium-skin-of-body-geobkcog0fpkv3os0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 45,342
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326753
- Publication: https://doi.org/10.1126/science.aeb3900
- Load: `Catalog().dataset("GeObkcoG0FpkV3OS0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-iwm5ns5xhaf9fo330000"></a>
## Human dorsolateral prefrontal cortex

- uid: `iwm5NS5XHAF9fO330000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-iwm5ns5xhaf9fo330000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("iwm5NS5XHAF9fO330000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-hleqmhjoxygvzr1m0000"></a>
## Mouse heart

- uid: `hleQMHJoxygVzR1m0000`
- Page: /datasets/visium-spatial-gene-expression-heart-hleqmhjoxygvzr1m0000/
- Technology: Visium
- Organism: mouse
- Tissue: heart
- Modality: RNA
- Observations (spots): 959
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5691526
- Collections: [geo-gse188888](/collections/md/7.md#geo-gse188888)
- Load: `Catalog().dataset("hleQMHJoxygVzR1m0000").to_sdata()`


<a id="10x-xenium-heart-left-ventricle-v9yp12g9j18zijtz0000"></a>
## Mouse heart left ventricle

- uid: `v9Yp12G9j18zijTZ0000`
- Page: /datasets/10x-xenium-heart-left-ventricle-v9yp12g9j18zijtz0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: heart left ventricle
- Condition: heart disorder
- Modality: RNA
- Observations (cells): 61,437
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280376
- Publication: https://doi.org/10.1038/s44161-025-00739-6
- Collections: [geo-gse280376](/collections/md/c.md#geo-gse280376)
- Load: `Catalog().dataset("v9Yp12G9j18zijTZ0000").to_sdata()`


<a id="merfish-brain-paobzoekep4t0j9v0000"></a>
## Mouse brain

- uid: `pAOBzOEKEP4t0J9V0000`
- Page: /datasets/merfish-brain-paobzoekep4t0j9v0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 14,538
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("pAOBzOEKEP4t0J9V0000").to_sdata()`


<a id="merfish-brain-ojr542cakaibj6qs0000"></a>
## Mouse brain

- uid: `OjR542CakAiBj6Qs0000`
- Page: /datasets/merfish-brain-ojr542cakaibj6qs0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 16,997
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("OjR542CakAiBj6Qs0000").to_sdata()`


<a id="vizgen-merscope-spinal-cord-agzrll5jz5c3kfzk0000"></a>
## Mouse spinal cord

- uid: `AGzrlL5JZ5C3KfZK0000`
- Page: /datasets/vizgen-merscope-spinal-cord-agzrll5jz5c3kfzk0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: spinal cord
- Condition: demyelinating disease of central nervous system
- Modality: RNA
- Observations (cells): 24,113
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268492
- Publication: https://doi.org/10.1038/s41467-025-57632-w
- Collections: [geo-gse268492](/collections/md/5.md#geo-gse268492)
- Load: `Catalog().dataset("AGzrlL5JZ5C3KfZK0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-lung-szlhpdoomktpkuay0000"></a>
## Human lung

- uid: `sZLhpdOOMktpkuaY0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-lung-szlhpdoomktpkuay0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: lung
- Modality: Metabolomics
- Observations: 35,672
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2020-11-06_21h04m07s
- Load: `Catalog().dataset("sZLhpdOOMktpkuaY0000").to_sdata()`


<a id="mibi-tof-breast-z4rvhmrc0perbpdk0000"></a>
## Human breast

- uid: `Z4rVhmRc0PeRbpdK0000`
- Page: /datasets/mibi-tof-breast-z4rvhmrc0perbpdk0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,325
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("Z4rVhmRc0PeRbpdK0000").to_sdata()`


<a id="stereo-seq-brain-zdvkeytmdq0in1ra0000"></a>
## Mouse brain

- uid: `ZDvKeYTMdQ0In1Ra0000`
- Page: /datasets/stereo-seq-brain-zdvkeytmdq0in1ra0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations: 108,434
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333479
- Collections: [geo-gse333479](/collections/md/4.md#geo-gse333479)
- Load: `Catalog().dataset("ZDvKeYTMdQ0In1Ra0000").to_sdata()`


<a id="vizgen-merscope-pancreas-7t7dqw2n64frqzmq0000"></a>
## Human pancreas

- uid: `7T7Dqw2n64FRQzmQ0000`
- Page: /datasets/vizgen-merscope-pancreas-7t7dqw2n64frqzmq0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: pancreas
- Condition: type 2 diabetes mellitus
- Modality: RNA
- Observations (cells): 9,511
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333737
- Publication: https://doi.org/10.64898/2026.06.30.733275
- Collections: [geo-gse333737](/collections/md/9.md#geo-gse333737)
- Load: `Catalog().dataset("7T7Dqw2n64FRQzmQ0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-pcsgbjwf3mnr9vbj0000"></a>
## Human kidney

- uid: `PcSgbjwf3mNR9Vbj0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-pcsgbjwf3mnr9vbj0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 32,800
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-03-20_17h32m19s
- Load: `Catalog().dataset("PcSgbjwf3mNR9Vbj0000").to_sdata()`


<a id="stereo-seq-forebrain-hdjq6c03oqmtnbng0000"></a>
## Mouse forebrain

- uid: `hDjQ6c03OqMTNbNG0000`
- Page: /datasets/stereo-seq-forebrain-hdjq6c03oqmtnbng0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: forebrain
- Modality: RNA
- Observations: 32,001
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295815
- Collections: [geo-gse295815](/collections/md/e.md#geo-gse295815)
- Load: `Catalog().dataset("hDjQ6c03OqMTNbNG0000").to_sdata()`


<a id="vizgen-merscope-unknown-l6qosbvmkfsb49ug0000"></a>
## Human unknown

- uid: `l6QosBVMkfsB49ug0000`
- Page: /datasets/vizgen-merscope-unknown-l6qosbvmkfsb49ug0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: unknown
- Condition: cancer
- Modality: RNA
- Observations (cells): 16,145
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE308147
- Publication: https://doi.org/10.1038/s41467-025-64990-y
- Collections: [geo-gsm9238733](/collections/md/d.md#geo-gsm9238733)
- Load: `Catalog().dataset("l6QosBVMkfsB49ug0000").to_sdata()`


<a id="mibi-tof-breast-l4kfmtjzvdzuadlv0000"></a>
## Human breast

- uid: `l4KfmTjZVdzUAdLV0000`
- Page: /datasets/mibi-tof-breast-l4kfmtjzvdzuadlv0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,466
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("l4KfmTjZVdzUAdLV0000").to_sdata()`


<a id="10x-xenium-lymph-node-iq1o8fahdykvmvy40000"></a>
## Human lymph node

- uid: `iQ1O8FAHDykvMVY40000`
- Page: /datasets/10x-xenium-lymph-node-iq1o8fahdykvmvy40000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (cells): 291,682
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328422
- Load: `Catalog().dataset("iQ1O8FAHDykvMVY40000").to_sdata()`


<a id="merfish-brain-milaiwhgkdzzsp6b0000"></a>
## Mouse brain

- uid: `milaIWHGKdzzsp6B0000`
- Page: /datasets/merfish-brain-milaiwhgkdzzsp6b0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 11,088
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("milaIWHGKdzzsp6B0000").to_sdata()`


<a id="vizgen-merscope-pancreas-g7cfw6k2llf1n8au0000"></a>
## Mouse pancreas

- uid: `G7CFw6k2llf1n8au0000`
- Page: /datasets/vizgen-merscope-pancreas-g7cfw6k2llf1n8au0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: pancreas
- Condition: pancreatic neoplasm
- Modality: RNA
- Observations (cells): 392,164
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274617
- Publication: https://doi.org/10.1053/j.gastro.2025.12.014
- Load: `Catalog().dataset("G7CFw6k2llf1n8au0000").to_sdata()`


<a id="10x-xenium-small-intestine-aws1exoyuldmecs70000"></a>
## Human small intestine

- uid: `awS1eXOyUldMecS70000`
- Page: /datasets/10x-xenium-small-intestine-aws1exoyuldmecs70000/
- Technology: 10x Xenium
- Organism: human
- Tissue: small intestine
- Modality: RNA
- Observations (cells): 50,732
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296331
- Publication: https://doi.org/10.1016/j.cell.2025.08.029
- Load: `Catalog().dataset("awS1eXOyUldMecS70000").to_sdata()`


<a id="vizgen-merscope-skin-of-temple-n99lgbcz6f6yulgo0000"></a>
## Human skin of temple

- uid: `N99lgbcz6f6yuLgo0000`
- Page: /datasets/vizgen-merscope-skin-of-temple-n99lgbcz6f6yulgo0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of temple
- Modality: RNA
- Observations (cells): 69,492
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE292394
- Publication: https://doi.org/10.1016/j.jid.2025.04.041
- Load: `Catalog().dataset("N99lgbcz6f6yuLgo0000").to_sdata()`