# SpatialData-DB datasets, shard 4e

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-pyr5bduizibegtz10000"></a>
## Mouse brain

- uid: `pYr5bduIZibegTZ10000`
- Page: /datasets/visium-spatial-gene-expression-brain-pyr5bduizibegtz10000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,289
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/mouse-brain-serial-section-2-sagittal-posterior-1-standard
- Load: `Catalog().dataset("pYr5bduIZibegTZ10000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-gdvptd06wdcwck1j0000"></a>
## Mouse liver

- uid: `gdVPTd06WdCwcK1j0000`
- Page: /datasets/visium-spatial-gene-expression-liver-gdvptd06wdcwck1j0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 2,281
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE236424
- Collections: [geo-gse236424](/collections/md/3.md#geo-gse236424)
- Load: `Catalog().dataset("gdVPTd06WdCwcK1j0000").to_sdata()`


<a id="visium-spatial-gene-expression-saphenous-vein-hy3pzsmpwfuql3r50000"></a>
## Human saphenous vein

- uid: `hY3PzsmPWfuQL3r50000`
- Page: /datasets/visium-spatial-gene-expression-saphenous-vein-hy3pzsmpwfuql3r50000/
- Technology: Visium
- Organism: human
- Tissue: saphenous vein
- Modality: RNA
- Observations (spots): 4,990
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310351
- Publication: https://doi.org/10.1152/ajpheart.00653.2025
- Collections: [geo-gse310351](/collections/md/a.md#geo-gse310351)
- Load: `Catalog().dataset("hY3PzsmPWfuQL3r50000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-08gmpcbqg9luegmf0000"></a>
## Mouse spinal cord

- uid: `08gMPCBqg9luEGmF0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-08gmpcbqg9luegmf0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 373
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("08gMPCBqg9luEGmF0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-gtg2hqa27yfwrzl60000"></a>
## Mouse spinal cord

- uid: `gTG2HQa27YFWrzL60000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-gtg2hqa27yfwrzl60000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 212
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("gTG2HQa27YFWrzL60000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-uys9caeapqbt6owb0000"></a>
## Mouse spinal cord

- uid: `uYS9CaeapQbT6oWB0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-uys9caeapqbt6owb0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 318
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("uYS9CaeapQbT6oWB0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-yrvk87xxhfnk6x1j0000"></a>
## Human breast

- uid: `YrVK87XxhfNk6X1J0000`
- Page: /datasets/visium-spatial-gene-expression-breast-yrvk87xxhfnk6x1j0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (spots): 2,166
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE242311
- Publication: https://doi.org/10.3390/ijms252011109
- Collections: [geo-gse242311](/collections/md/f.md#geo-gse242311)
- Load: `Catalog().dataset("YrVK87XxhfNk6X1J0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-ylw5la7ahqwqfuyw0000"></a>
## Human kidney

- uid: `Ylw5la7ahQwqFuYw0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-ylw5la7ahqwqfuyw0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 724
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("Ylw5la7ahQwqFuYw0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-d1jra8uvfl6bc2vn0000"></a>
## Human kidney

- uid: `D1Jra8uvfL6bc2Vn0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-d1jra8uvfl6bc2vn0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: diabetic kidney disease
- Modality: RNA
- Observations (spots): 437
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307817
- Publication: https://doi.org/10.1016/j.kint.2026.03.020
- Collections: [geo-gse307817](/collections/md/a.md#geo-gse307817)
- Load: `Catalog().dataset("D1Jra8uvfL6bc2Vn0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-ycd5msesx9s8gpx40000"></a>
## Human liver

- uid: `yCD5msESx9S8GPx40000`
- Page: /datasets/visium-spatial-gene-expression-liver-ycd5msesx9s8gpx40000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatoblastoma
- Modality: RNA
- Observations (spots): 4,123
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283207
- Publication: https://doi.org/10.1016/j.jhep.2025.01.031
- Collections: [geo-gse261958](/collections/md/b.md#geo-gse261958)
- Load: `Catalog().dataset("yCD5msESx9S8GPx40000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ggfjlqycan7ovpqb0000"></a>
## Mouse brain

- uid: `GGfjLqYcaN7OVpQB0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ggfjlqycan7ovpqb0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,676
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("GGfjLqYcaN7OVpQB0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-fj4mbh79sliyd9sd0000"></a>
## Human pancreas

- uid: `FJ4MBh79SlIYd9SD0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-fj4mbh79sliyd9sd0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,743
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("FJ4MBh79SlIYd9SD0000").to_sdata()`


<a id="visium-spatial-gene-expression-thyroid-gland-0bofjw6tijv16acj0000"></a>
## Human thyroid gland

- uid: `0bofjW6TijV16ACj0000`
- Page: /datasets/visium-spatial-gene-expression-thyroid-gland-0bofjw6tijv16acj0000/
- Technology: Visium
- Organism: human
- Tissue: thyroid gland
- Condition: thyroid gland carcinoma
- Modality: RNA
- Observations (spots): 4,748
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250521
- Collections: [geo-gse250521](/collections/md/5.md#geo-gse250521)
- Load: `Catalog().dataset("0bofjW6TijV16ACj0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-kegsvl4myankgifo0000"></a>
## Human spleen

- uid: `Kegsvl4MYANKgiFo0000`
- Page: /datasets/visium-spatial-gene-expression-spleen-kegsvl4myankgifo0000/
- Technology: Visium
- Organism: human
- Tissue: spleen
- Condition: myelofibrosis
- Modality: RNA
- Observations (spots): 4,948
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE332563
- Collections: [geo-gse332563](/collections/md/b.md#geo-gse332563)
- Load: `Catalog().dataset("Kegsvl4MYANKgiFo0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-wfg2ypvsyabuk2mo0000"></a>
## Mouse brain

- uid: `Wfg2ypvSyAbuK2mo0000`
- Page: /datasets/visium-spatial-gene-expression-brain-wfg2ypvsyabuk2mo0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 2,844
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313407
- Publication: https://doi.org/10.1177/08977151251390528
- Collections: [geo-gse313407](/collections/md/3.md#geo-gse313407)
- Load: `Catalog().dataset("Wfg2ypvSyAbuK2mo0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-zisvpj9itofinqws0000"></a>
## Human ovary

- uid: `ZiSvPj9iTOfINqWs0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-zisvpj9itofinqws0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 1,304
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327312
- Collections: [geo-gse327312](/collections/md/b.md#geo-gse327312)
- Load: `Catalog().dataset("ZiSvPj9iTOfINqWs0000").to_sdata()`


<a id="10x-xenium-kidney-svywy3ftqngttmrp0000"></a>
## Human kidney

- uid: `sVYWy3ftQNgttMRP0000`
- Page: /datasets/10x-xenium-kidney-svywy3ftqngttmrp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Modality: RNA
- Observations (cells): 15,786
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE286186
- Collections: [geo-gse286184](/collections/md/4.md#geo-gse286184)
- Load: `Catalog().dataset("sVYWy3ftQNgttMRP0000").to_sdata()`


<a id="vizgen-merscope-brain-8qhdmmziqgxouxmj0000"></a>
## Mouse brain

- uid: `8QHDMmZiQgXOUxmJ0000`
- Page: /datasets/vizgen-merscope-brain-8qhdmmziqgxouxmj0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 405,842
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("8QHDMmZiQgXOUxmJ0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-skeletal-muscle-tissue-t3xduah5x5zddjns0000"></a>
## Human skeletal muscle tissue

- uid: `T3XduAH5X5zDdJNs0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-skeletal-muscle-tissue-t3xduah5x5zddjns0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: skeletal muscle tissue
- Modality: Metabolomics
- Observations: 51,359
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2025-05-20_07h45m39s
- Load: `Catalog().dataset("T3XduAH5X5zDdJNs0000").to_sdata()`


<a id="mibi-tof-breast-o2dpmhhc86srcfmp0000"></a>
## Human breast

- uid: `o2dPmHhC86sRCfMP0000`
- Page: /datasets/mibi-tof-breast-o2dpmhhc86srcfmp0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,963
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("o2dPmHhC86sRCfMP0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-o0zffgdrxkludml30000"></a>
## Human kidney

- uid: `O0ZFfgDrXkludML30000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-o0zffgdrxkludml30000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 29,988
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-09-06_21h31m18s
- Load: `Catalog().dataset("O0ZFfgDrXkludML30000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-r1vlggsauqvufw9j0000"></a>
## Human skin of body

- uid: `r1vlggsauqVUFw9j0000`
- Page: /datasets/vizgen-merscope-skin-of-body-r1vlggsauqvufw9j0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,921
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("r1vlggsauqVUFw9j0000").to_sdata()`


<a id="mibi-tof-breast-nfskyvbbknkirda60000"></a>
## Human breast

- uid: `NFSKyVbBkNkirDa60000`
- Page: /datasets/mibi-tof-breast-nfskyvbbknkirda60000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,030
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("NFSKyVbBkNkirDa60000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-vafgrf8bvjgunsyo0000"></a>
## Human kidney

- uid: `VAfGRf8bvJGunSYo0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-vafgrf8bvjgunsyo0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 7,410
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-04-24_20h55m49s
- Load: `Catalog().dataset("VAfGRf8bvJGunSYo0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-rd69n6tqthkbrnet0000"></a>
## Human skin of body

- uid: `Rd69N6TQtHkbrNEt0000`
- Page: /datasets/vizgen-merscope-skin-of-body-rd69n6tqthkbrnet0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 8,678
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("Rd69N6TQtHkbrNEt0000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-bxhiv0oa5qn60mef0000"></a>
## Human middle temporal gyrus

- uid: `bXhIV0OA5Qn60MEF0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-bxhiv0oa5qn60mef0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 25,847
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("bXhIV0OA5Qn60MEF0000").to_sdata()`


<a id="10x-xenium-common-carotid-artery-plus-branches-axqdj1cjw6ulzmga0000"></a>
## Human common carotid artery plus branches

- uid: `AXqdJ1cJW6ULzmgA0000`
- Page: /datasets/10x-xenium-common-carotid-artery-plus-branches-axqdj1cjw6ulzmga0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: common carotid artery plus branches
- Condition: atherosclerosis
- Modality: RNA
- Observations (cells): 32,663
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE294466
- Publication: https://doi.org/10.1038/s41467-025-67679-4
- Load: `Catalog().dataset("AXqdJ1cJW6ULzmgA0000").to_sdata()`


<a id="10x-xenium-bone-marrow-l1saiab2bdixpjjo0000"></a>
## Human bone marrow

- uid: `l1sAIab2bDixPJJO0000`
- Page: /datasets/10x-xenium-bone-marrow-l1saiab2bdixpjjo0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Modality: RNA
- Observations (cells): 51,372
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299207
- Publication: https://doi.org/10.1182/blood.2025028896
- Load: `Catalog().dataset("l1sAIab2bDixPJJO0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-hqjcz1hoewx7aeux0000"></a>
## Human kidney

- uid: `hqjCZ1HOeWx7AeUX0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-hqjcz1hoewx7aeux0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 39,004
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-09-05_23h36m56s
- Load: `Catalog().dataset("hqjCZ1HOeWx7AeUX0000").to_sdata()`