# SpatialData-DB datasets, shard 4c

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-nxogmuwopdmz61rj0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `nXOGMUWopDmZ61rj0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-nxogmuwopdmz61rj0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("nXOGMUWopDmZ61rj0000").to_sdata()`


<a id="spatial-transcriptomics-brain-e4jwupsfizkmuqqw0000"></a>
## Mouse brain

- uid: `E4JWUPsfizkMuQqw0000`
- Page: /datasets/spatial-transcriptomics-brain-e4jwupsfizkmuqqw0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 393
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("E4JWUPsfizkMuQqw0000").to_sdata()`


<a id="visium-hd-lymph-node-hiyzmru5lldcansz0002"></a>
## Human lymph node

- uid: `HiYzMrU5llDCaNSz0002`
- Page: /datasets/visium-hd-lymph-node-hiyzmru5lldcansz0002/
- Technology: Visium HD
- Organism: human
- Tissue: lymph node
- Condition: prostate cancer
- Modality: RNA
- Observations (bins): 162,379
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8658293
- Publication: https://doi.org/10.1172/JCI193745
- Collections: [geo-gse283227](/collections/md/3.md#geo-gse283227)
- Load: `Catalog().dataset("HiYzMrU5llDCaNSz0002").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-fud0i50x7qzzg3nc0000"></a>
## Human kidney

- uid: `fUd0i50X7qZzg3nC0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-fud0i50x7qzzg3nc0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 698
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("fUd0i50X7qZzg3nC0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-tissue-kmbzvpljcjrl9wqt0000"></a>
## Mouse bone tissue

- uid: `KmbZVPljcjrL9wqt0000`
- Page: /datasets/visium-spatial-gene-expression-bone-tissue-kmbzvpljcjrl9wqt0000/
- Technology: Visium
- Organism: mouse
- Tissue: bone tissue
- Modality: RNA
- Observations (spots): 1,788
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE221571
- Publication: https://doi.org/10.1038/s41467-023-36071-5
- Collections: [geo-gse221571](/collections/md/0.md#geo-gse221571)
- Load: `Catalog().dataset("KmbZVPljcjrL9wqt0000").to_sdata()`


<a id="visium-spatial-gene-expression-stomach-5l4reub1uko0lpcj0000"></a>
## Mouse stomach

- uid: `5l4rEUB1UkO0lPCj0000`
- Page: /datasets/visium-spatial-gene-expression-stomach-5l4reub1uko0lpcj0000/
- Technology: Visium
- Organism: mouse
- Tissue: stomach
- Condition: gastric cancer
- Modality: RNA
- Observations (spots): 2,429
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE186290
- Publication: https://doi.org/10.1111/cas.15244
- Load: `Catalog().dataset("5l4rEUB1UkO0lPCj0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-bwqufavooerh3jye0000"></a>
## Human basal ganglion

- uid: `BWqufaVoOErh3jYe0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-bwqufavooerh3jye0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 52,226
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("BWqufaVoOErh3jYe0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-um9usndrwz3yreqp0000"></a>
## Human kidney

- uid: `UM9uSNDrWz3yreqP0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-um9usndrwz3yreqp0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 696
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("UM9uSNDrWz3yreqP0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-tissue-ytnznbz7ptt4b1te0000"></a>
## Human bone tissue

- uid: `YtnZnbZ7pTt4B1te0000`
- Page: /datasets/visium-spatial-gene-expression-bone-tissue-ytnznbz7ptt4b1te0000/
- Technology: Visium
- Organism: human
- Tissue: bone tissue
- Condition: estrogen-receptor positive breast cancer
- Modality: RNA
- Observations (spots): 1,703
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298286
- Publication: https://doi.org/10.1158/0008-5472.CAN-25-3161
- Collections: [geo-gse298286](/collections/md/0.md#geo-gse298286)
- Load: `Catalog().dataset("YtnZnbZ7pTt4B1te0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-0yfbip4zw2txzstm0000"></a>
## Mouse brain

- uid: `0YfbIp4Zw2TxzSTM0000`
- Page: /datasets/visium-spatial-gene-expression-brain-0yfbip4zw2txzstm0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 3,040
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE270389
- Publication: https://doi.org/10.1523/ENEURO.0260-24.2024
- Collections: [geo-gse270382](/collections/md/b.md#geo-gse270382)
- Load: `Catalog().dataset("0YfbIp4Zw2TxzSTM0000").to_sdata()`


<a id="visium-spatial-gene-expression-coronary-artery-rtik0rglqh8tc9ej0001"></a>
## Human coronary artery

- uid: `rtiK0Rglqh8tc9eJ0001`
- Page: /datasets/visium-spatial-gene-expression-coronary-artery-rtik0rglqh8tc9ej0001/
- Technology: Visium
- Organism: human
- Tissue: coronary artery
- Modality: RNA
- Observations (spots): 3,146
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE316390
- Collections: [geo-gse316390](/collections/md/b.md#geo-gse316390)
- Load: `Catalog().dataset("rtiK0Rglqh8tc9eJ0001").to_sdata()`


<a id="visium-spatial-gene-expression-breast-4t6wxw17za14qbk70000"></a>
## Mouse breast

- uid: `4T6wxW17Za14qbk70000`
- Page: /datasets/visium-spatial-gene-expression-breast-4t6wxw17za14qbk70000/
- Technology: Visium
- Organism: mouse
- Tissue: breast
- Condition: breast carcinoma
- Modality: RNA
- Observations (spots): 3,605
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299631
- Collections: [geo-gse299631](/collections/md/e.md#geo-gse299631)
- Load: `Catalog().dataset("4T6wxW17Za14qbk70000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-jndqtse2oem7xtuz0000"></a>
## Human pancreas

- uid: `jndQTSE2oEM7xtUZ0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-jndqtse2oem7xtuz0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 4,154
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("jndQTSE2oEM7xtUZ0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-te7nxdilkemlym3t0000"></a>
## Mouse brain

- uid: `te7nXdilKemLym3t0000`
- Page: /datasets/visium-spatial-gene-expression-brain-te7nxdilkemlym3t0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE275131
- Publication: https://doi.org/10.1016/j.neuropharm.2026.110835
- Collections: [geo-gse275131](/collections/md/1.md#geo-gse275131)
- Load: `Catalog().dataset("te7nXdilKemLym3t0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-z7wy0iop4x3v4srf0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `z7wy0IOp4X3V4srf0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-z7wy0iop4x3v4srf0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: bipolar disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("z7wy0IOp4X3V4srf0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-l07pkqe3qrs3lx6d0000"></a>
## Human ovary

- uid: `l07Pkqe3qRs3Lx6d0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-l07pkqe3qrs3lx6d0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 3,180
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6506117
- Collections: [geo-gse211956](/collections/md/0.md#geo-gse211956)
- Load: `Catalog().dataset("l07Pkqe3qRs3Lx6d0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-pri4vvs68cnymabw0000"></a>
## Human pancreas

- uid: `Pri4vvs68cNymABw0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-pri4vvs68cnymabw0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,563
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452883
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("Pri4vvs68cNymABw0000").to_sdata()`


<a id="10x-xenium-brain-b6ionndzbybc2hc40000"></a>
## Human brain

- uid: `b6iONndzByBC2hC40000`
- Page: /datasets/10x-xenium-brain-b6ionndzbybc2hc40000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: medulloblastoma
- Modality: RNA
- Observations (cells): 211,673
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE291688
- Publication: https://doi.org/10.1186/s13059-025-03624-4
- Load: `Catalog().dataset("b6iONndzByBC2hC40000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-ybut9tykvi8xjqnc0000"></a>
## Mouse brain

- uid: `ybUT9TykVI8xjqnC0000`
- Page: /datasets/visium-spatial-gene-expression-brain-ybut9tykvi8xjqnc0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,225
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313896
- Publication: https://doi.org/10.1016/j.cell.2026.03.013
- Collections: [geo-gse313896](/collections/md/f.md#geo-gse313896)
- Load: `Catalog().dataset("ybUT9TykVI8xjqnC0000").to_sdata()`


<a id="vizgen-merscope-brain-vy0h7x4t9qxv4eja0000"></a>
## Mouse brain

- uid: `vY0H7X4t9qxV4eJA0000`
- Page: /datasets/vizgen-merscope-brain-vy0h7x4t9qxv4eja0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 127,853
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE237086
- Load: `Catalog().dataset("vY0H7X4t9qxV4eJA0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-ou9f5lkoyrrjnhp90000"></a>
## Human skin of body

- uid: `Ou9f5lkoyRrjnhP90000`
- Page: /datasets/vizgen-merscope-skin-of-body-ou9f5lkoyrrjnhp90000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,782
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("Ou9f5lkoyRrjnhP90000").to_sdata()`


<a id="mibi-tof-lymph-node-8sfif11nsv89m5us0000"></a>
## Human lymph node

- uid: `8sFIf11nsv89M5uS0000`
- Page: /datasets/mibi-tof-lymph-node-8sfif11nsv89m5us0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 418
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("8sFIf11nsv89M5uS0000").to_sdata()`


<a id="10x-xenium-lymph-node-l3w1zgqqxwlir0sz0000"></a>
## Human lymph node

- uid: `l3w1ZGQqXWlIR0sz0000`
- Page: /datasets/10x-xenium-lymph-node-l3w1zgqqxwlir0sz0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (cells): 260,137
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328422
- Load: `Catalog().dataset("l3w1ZGQqXWlIR0sz0000").to_sdata()`


<a id="mibi-tof-lymph-node-aql6gnawixc3wvru0000"></a>
## Human lymph node

- uid: `aQl6gNAwIXC3wvrU0000`
- Page: /datasets/mibi-tof-lymph-node-aql6gnawixc3wvru0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,980
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("aQl6gNAwIXC3wvrU0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-faklusta0b85qbxh0000"></a>
## Human skin of body

- uid: `fakLUSTa0B85qbxh0000`
- Page: /datasets/vizgen-merscope-skin-of-body-faklusta0b85qbxh0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 14,688
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("fakLUSTa0B85qbxh0000").to_sdata()`


<a id="mibi-tof-skin-of-body-xe6xfyzz4za3cuec0000"></a>
## Human skin of body

- uid: `Xe6XfyZZ4ZA3CueC0000`
- Page: /datasets/mibi-tof-skin-of-body-xe6xfyzz4za3cuec0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: skin of body
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,589
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("Xe6XfyZZ4ZA3CueC0000").to_sdata()`


<a id="10x-xenium-lung-tfpzebinvsjlell40000"></a>
## Human lung

- uid: `tfpzEbiNvSJLeLL40000`
- Page: /datasets/10x-xenium-lung-tfpzebinvsjlell40000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: large cell neuroendocrine carcinoma
- Modality: RNA
- Observations (cells): 274,587
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE347080
- Load: `Catalog().dataset("tfpzEbiNvSJLeLL40000").to_sdata()`


<a id="10x-xenium-common-carotid-artery-plus-branches-bzbgcuwzrp1c0fko0000"></a>
## Human common carotid artery plus branches

- uid: `bZBgcUWzrp1C0fKO0000`
- Page: /datasets/10x-xenium-common-carotid-artery-plus-branches-bzbgcuwzrp1c0fko0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: common carotid artery plus branches
- Condition: atherosclerosis
- Modality: RNA
- Observations (cells): 49,626
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE294466
- Publication: https://doi.org/10.1038/s41467-025-67679-4
- Load: `Catalog().dataset("bZBgcUWzrp1C0fKO0000").to_sdata()`


<a id="vizgen-merscope-brain-iqcrdm6mhphd3m590000"></a>
## Mouse brain

- uid: `iQCrdm6mhPHd3m590000`
- Page: /datasets/vizgen-merscope-brain-iqcrdm6mhphd3m590000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 123,651
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE202623
- Publication: https://doi.org/10.1038/s41467-023-39447-9
- Load: `Catalog().dataset("iQCrdm6mhPHd3m590000").to_sdata()`