# SpatialData-DB datasets, shard 46

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-skin-of-body-bh3vnch1jwm8bnxd0000"></a>
## Mouse skin of body

- uid: `bH3VnCh1jWm8BNXd0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-bh3vnch1jwm8bnxd0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245582
- Publication: https://doi.org/10.1158/0008-5472.CAN-24-0690
- Collections: [geo-gse245582](/collections/md/8.md#geo-gse245582)
- Load: `Catalog().dataset("bH3VnCh1jWm8BNXd0000").to_sdata()`


<a id="10x-xenium-brain-psyvfqad8ktd0erf0000"></a>
## Mouse brain

- uid: `PsyVfQAD8kTd0ERf0000`
- Page: /datasets/10x-xenium-brain-psyvfqad8ktd0erf0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (cells): 60,974
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266971
- Publication: https://doi.org/10.1016/j.ccell.2024.08.012
- Load: `Catalog().dataset("PsyVfQAD8kTd0ERf0000").to_sdata()`


<a id="10x-xenium-brain-k8uq1ge2i9y8qdpi0000"></a>
## Mouse brain

- uid: `K8uQ1Ge2i9y8qDPI0000`
- Page: /datasets/10x-xenium-brain-k8uq1ge2i9y8qdpi0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 59,935
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/xenium-in-situ-analysis-of-alzheimers-disease-mouse-model-brain-coronal-sections-from-one-hemisphere-over-a-time-course-1-standard
- Load: `Catalog().dataset("K8uQ1Ge2i9y8qDPI0000").to_sdata()`


<a id="spatial-transcriptomics-brain-jtcoibc4qbpbuivv0000"></a>
## Mouse brain

- uid: `jtCOiBc4QbPbuIvv0000`
- Page: /datasets/spatial-transcriptomics-brain-jtcoibc4qbpbuivv0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 403
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/sciadv.abb3446
- Publication: https://doi.org/10.1126/sciadv.abb3446
- Collections: [doi-10-1126-sciadv-abb3446](/collections/md/a.md#doi-10-1126-sciadv-abb3446)
- Load: `Catalog().dataset("jtCOiBc4QbPbuIvv0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-mj4jtrvvovgjbyrd0000"></a>
## Human intestine

- uid: `mj4jTrVvovgJBYrD0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-mj4jtrvvovgjbyrd0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: colon adenocarcinoma
- Modality: RNA
- Observations (spots): 4,624
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.cell.com/cell/fulltext/S0092-8674(23)01222-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867423012229%3Fshowall%3Dtrue#secsectitle0020
- Publication: https://doi.org/10.1016/j.cell.2023.11.006
- Collections: [doi-10-1016-j-cell-2023-11-006](/collections/md/1.md#doi-10-1016-j-cell-2023-11-006)
- Load: `Catalog().dataset("mj4jTrVvovgJBYrD0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-mpim5bgxtuop5cdx0000"></a>
## Human kidney

- uid: `mpiM5bGXtUop5CDx0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-mpim5bgxtuop5cdx0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: clear cell renal carcinoma
- Modality: RNA
- Observations (spots): 3,206
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/35231421/
- Publication: https://doi.org/10.1016/j.immuni.2022.02.001
- Collections: [doi-10-1016-j-immuni-2022-02-001](/collections/md/d.md#doi-10-1016-j-immuni-2022-02-001)
- Load: `Catalog().dataset("mpiM5bGXtUop5CDx0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-7ein6nzuqx7hrblh0000"></a>
## Mouse spleen

- uid: `7eiN6nzUQX7hRbLH0000`
- Page: /datasets/visium-spatial-gene-expression-spleen-7ein6nzuqx7hrblh0000/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Condition: lymphocytic choriomeningitis
- Modality: RNA
- Observations (spots): 1,669
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE200720
- Publication: https://doi.org/10.1016/j.celrep.2022.111736
- Collections: [geo-gse200720](/collections/md/0.md#geo-gse200720)
- Load: `Catalog().dataset("7eiN6nzUQX7hRbLH0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-face-ejhy6vhvio9mvwo20000"></a>
## Mouse skin of face

- uid: `EJhy6vHVio9mVwO20000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-face-ejhy6vhvio9mvwo20000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of face
- Modality: RNA
- Observations (spots): 671
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE287384
- Publication: https://doi.org/10.1126/scitranslmed.adk2101
- Collections: [geo-gse287384](/collections/md/a.md#geo-gse287384)
- Load: `Catalog().dataset("EJhy6vHVio9mVwO20000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-1dg7eqluahiegl210000"></a>
## Mouse lung

- uid: `1dG7eqLuahiegL210000`
- Page: /datasets/visium-spatial-gene-expression-lung-1dg7eqluahiegl210000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: lung cancer
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295967
- Collections: [geo-gse295967](/collections/md/1.md#geo-gse295967)
- Load: `Catalog().dataset("1dG7eqLuahiegL210000").to_sdata()`


<a id="10x-xenium-mediastinal-lymph-node-e5sfue4zhq8xng2b0000"></a>
## Crab-eating macaque mediastinal lymph node

- uid: `E5SFuE4zHq8XNg2B0000`
- Page: /datasets/10x-xenium-mediastinal-lymph-node-e5sfue4zhq8xng2b0000/
- Technology: 10x Xenium
- Organism: crab-eating macaque
- Tissue: mediastinal lymph node
- Condition: COVID-19
- Modality: RNA
- Observations (cells): 2,155,761
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE346722
- Load: `Catalog().dataset("E5SFuE4zHq8XNg2B0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-qazsjzx3gx4iyibp0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `qazsJzx3gx4IyibP0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-qazsjzx3gx4iyibp0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: bipolar disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("qazsJzx3gx4IyibP0000").to_sdata()`


<a id="10x-xenium-bone-marrow-siutqlao2ih8fdbe0000"></a>
## Human bone marrow

- uid: `sIuTqlao2IH8fdbE0000`
- Page: /datasets/10x-xenium-bone-marrow-siutqlao2ih8fdbe0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (cells): 27,547
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288340
- Load: `Catalog().dataset("sIuTqlao2IH8fdbE0000").to_sdata()`


<a id="10x-xenium-larynx-lgndqeqkbgj1tarp0000"></a>
## Human larynx

- uid: `lgNdqeQkBgj1TARp0000`
- Page: /datasets/10x-xenium-larynx-lgndqeqkbgj1tarp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: larynx
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (cells): 7,727
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE324934
- Publication: https://doi.org/10.1186/s12916-026-04883-z
- Load: `Catalog().dataset("lgNdqeQkBgj1TARp0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-grmsjxc079kyfxwm0000"></a>
## Mouse kidney

- uid: `gRmSJXC079KyfxwM0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-grmsjxc079kyfxwm0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Modality: RNA
- Observations (spots): 2,858
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8323120
- Collections: [geo-gse269622](/collections/md/f.md#geo-gse269622)
- Load: `Catalog().dataset("gRmSJXC079KyfxwM0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-lupkss7rewkcfu0m0000"></a>
## Human liver

- uid: `LuPkSs7RewKcfU0m0000`
- Page: /datasets/visium-spatial-gene-expression-liver-lupkss7rewkcfu0m0000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 1,936
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281759
- Publication: https://doi.org/10.1016/j.jhepr.2026.101790
- Collections: [geo-gse281759](/collections/md/3.md#geo-gse281759)
- Load: `Catalog().dataset("LuPkSs7RewKcfU0m0000").to_sdata()`


<a id="10x-xenium-bone-element-7nukzllrvydgtlhp0000"></a>
## Mouse bone element

- uid: `7nukzLlRVYDGTlhp0000`
- Page: /datasets/10x-xenium-bone-element-7nukzllrvydgtlhp0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: bone element
- Condition: melanoma
- Modality: RNA
- Observations (cells): 119,458
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329415
- Collections: [geo-gse329415](/collections/md/4.md#geo-gse329415)
- Load: `Catalog().dataset("7nukzLlRVYDGTlhp0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-dmkaxzrqxfyvnik60000"></a>
## Mouse liver

- uid: `DMkAXZRqxfYvNiK60000`
- Page: /datasets/visium-spatial-gene-expression-liver-dmkaxzrqxfyvnik60000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 2,741
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7116329
- Collections: [geo-gse228195](/collections/md/1.md#geo-gse228195)
- Load: `Catalog().dataset("DMkAXZRqxfYvNiK60000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-kcsfsi6n1eswcr8p0000"></a>
## Human pancreas

- uid: `kcsfSI6N1ESWcR8P0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-kcsfsi6n1eswcr8p0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,177
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452875
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("kcsfSI6N1ESWcR8P0000").to_sdata()`


<a id="merfish-brain-enwmv2rb9anboqdv0000"></a>
## Mouse brain

- uid: `ENwmV2rb9anboqDV0000`
- Page: /datasets/merfish-brain-enwmv2rb9anboqdv0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 11,545
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("ENwmV2rb9anboqDV0000").to_sdata()`


<a id="stereo-seq-prefrontal-cortex-xhhsnkd60b0dlxig0000"></a>
## Human prefrontal cortex

- uid: `xhhsNkd60B0DLxIG0000`
- Page: /datasets/stereo-seq-prefrontal-cortex-xhhsnkd60b0dlxig0000/
- Technology: Stereo-seq
- Organism: human
- Tissue: prefrontal cortex
- Condition: Alzheimer disease
- Modality: RNA
- Observations: 98,835
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269906
- Collections: [geo-gse269906](/collections/md/5.md#geo-gse269906)
- Load: `Catalog().dataset("xhhsNkd60B0DLxIG0000").to_sdata()`


<a id="mibi-tof-breast-iyz1bu70cos1grc20000"></a>
## Human breast

- uid: `iYz1bU70CoS1GrC20000`
- Page: /datasets/mibi-tof-breast-iyz1bu70cos1grc20000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 6,048
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("iYz1bU70CoS1GrC20000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-nxwrbmik9yecpxau0000"></a>
## Human kidney

- uid: `nxwRbmIK9yECpxAu0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-nxwrbmik9yecpxau0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 3,519
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-08-22_00h48m15s
- Load: `Catalog().dataset("nxwRbmIK9yECpxAu0000").to_sdata()`


<a id="mibi-tof-breast-mimhfsajqdaca2z90000"></a>
## Human breast

- uid: `MiMhFSajQDaCA2Z90000`
- Page: /datasets/mibi-tof-breast-mimhfsajqdaca2z90000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,291
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("MiMhFSajQDaCA2Z90000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-nnl0i5wr3jbjhx0f0000"></a>
## Human kidney

- uid: `nNl0i5WR3JbjHx0f0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-nnl0i5wr3jbjhx0f0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 25,740
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-04-24_22h41m36s
- Load: `Catalog().dataset("nNl0i5WR3JbjHx0f0000").to_sdata()`


<a id="10x-xenium-brain-md2hnihed0m79cs20000"></a>
## Human brain

- uid: `mD2hNiHed0M79cS20000`
- Page: /datasets/10x-xenium-brain-md2hnihed0m79cs20000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (cells): 144,901
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260452
- Publication: https://doi.org/10.1038/s41586-026-10214-2
- Load: `Catalog().dataset("mD2hNiHed0M79cS20000").to_sdata()`


<a id="mibi-tof-liver-fiuik9iwk2krrghs0000"></a>
## Human liver

- uid: `fiuIk9Iwk2kRRgHS0000`
- Page: /datasets/mibi-tof-liver-fiuik9iwk2krrghs0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: liver
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 317
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("fiuIk9Iwk2kRRgHS0000").to_sdata()`