# SpatialData-DB datasets, shard 3f

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-heart-w508dkshczz4xhos0000"></a>
## Human heart

- uid: `W508dksHCzZ4xHos0000`
- Page: /datasets/visium-spatial-gene-expression-heart-w508dkshczz4xhos0000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 4,247
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-heart-1-standard-1-1-0
- Load: `Catalog().dataset("W508dksHCzZ4xHos0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-zkggykt0tkdsvqn30000"></a>
## Mouse spleen

- uid: `zkggykT0tkDsvQn30000`
- Page: /datasets/visium-spatial-gene-expression-spleen-zkggykt0tkdsvqn30000/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Condition: malaria
- Modality: RNA
- Observations (spots): 2,498
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE254652
- Publication: https://doi.org/10.1186/s13059-025-03543-4
- Collections: [geo-gse254652](/collections/md/0.md#geo-gse254652)
- Load: `Catalog().dataset("zkggykT0tkDsvQn30000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-rfdpa4fospfqhwpr0000"></a>
## Mouse spinal cord

- uid: `RfDpA4fOspfqHwPr0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-rfdpa4fospfqhwpr0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 344
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("RfDpA4fOspfqHwPr0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-snc18tpphmdciemc0000"></a>
## Human kidney

- uid: `sNc18TppHmdCIEmC0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-snc18tpphmdciemc0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Modality: RNA
- Observations (spots): 1,034
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10356613/
- Publication: https://doi.org/10.1038/s41586-023-05769-3
- Collections: [doi-10-1038-s41586-023-05769-3](/collections/md/e.md#doi-10-1038-s41586-023-05769-3)
- Load: `Catalog().dataset("sNc18TppHmdCIEmC0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-tovzutjcdfonp9nr0000"></a>
## Human kidney

- uid: `ToVZUTJCDfonp9Nr0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-tovzutjcdfonp9nr0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: clear cell renal carcinoma
- Modality: RNA
- Observations (spots): 4,510
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/35231421/
- Publication: https://doi.org/10.1016/j.immuni.2022.02.001
- Collections: [doi-10-1016-j-immuni-2022-02-001](/collections/md/d.md#doi-10-1016-j-immuni-2022-02-001)
- Load: `Catalog().dataset("ToVZUTJCDfonp9Nr0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-8rpa9xcn8chdgcjf0000"></a>
## Human heart

- uid: `8RPa9XcN8chdGcjF0000`
- Page: /datasets/visium-spatial-gene-expression-heart-8rpa9xcn8chdgcjf0000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 1,225
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("8RPa9XcN8chdGcjF0000").to_sdata()`


<a id="visium-spatial-gene-expression-mucosa-qh6gguiynye5mhcj0000"></a>
## Human mucosa

- uid: `qH6GGUIYnYe5MhCj0000`
- Page: /datasets/visium-spatial-gene-expression-mucosa-qh6gguiynye5mhcj0000/
- Technology: Visium
- Organism: human
- Tissue: mucosa
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268014
- Publication: https://doi.org/10.1038/s41588-026-02723-7
- Collections: [geo-gse268014](/collections/md/a.md#geo-gse268014)
- Load: `Catalog().dataset("qH6GGUIYnYe5MhCj0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-gjpzt90yu5o9cnpo0000"></a>
## Human kidney

- uid: `GJPzT90Yu5o9cNPO0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-gjpzt90yu5o9cnpo0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 484
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("GJPzT90Yu5o9cNPO0000").to_sdata()`


<a id="visium-spatial-gene-expression-gut-associated-lymphoid-tissue-nicgbbfqe9vaji5i0000"></a>
## Human gut-associated lymphoid tissue

- uid: `nIcGbbFQe9vAjI5i0000`
- Page: /datasets/visium-spatial-gene-expression-gut-associated-lymphoid-tissue-nicgbbfqe9vaji5i0000/
- Technology: Visium
- Organism: human
- Tissue: gut-associated lymphoid tissue
- Modality: RNA
- Observations (spots): 3,408
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE251693
- Publication: https://doi.org/10.1038/s41467-024-48267-4
- Collections: [geo-gse251693](/collections/md/e.md#geo-gse251693)
- Load: `Catalog().dataset("nIcGbbFQe9vAjI5i0000").to_sdata()`


<a id="visium-spatial-gene-expression-spleen-zgegw2aydt4ialcn0000"></a>
## Mouse spleen

- uid: `zgEGw2aydT4ialcn0000`
- Page: /datasets/visium-spatial-gene-expression-spleen-zgegw2aydt4ialcn0000/
- Technology: Visium
- Organism: mouse
- Tissue: spleen
- Condition: lymphocytic choriomeningitis
- Modality: RNA
- Observations (spots): 2,659
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE200720
- Publication: https://doi.org/10.1016/j.celrep.2022.111736
- Collections: [geo-gse200720](/collections/md/0.md#geo-gse200720)
- Load: `Catalog().dataset("zgEGw2aydT4ialcn0000").to_sdata()`


<a id="10x-xenium-brain-da7yhdxszg3uy7xj0000"></a>
## Golden hamster brain

- uid: `Da7YhdXSzg3UY7xj0000`
- Page: /datasets/10x-xenium-brain-da7yhdxszg3uy7xj0000/
- Technology: 10x Xenium
- Organism: golden hamster
- Tissue: brain
- Modality: RNA
- Observations (cells): 486,207
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM10002162
- Collections: [geo-gse345359](/collections/md/f.md#geo-gse345359)
- Load: `Catalog().dataset("Da7YhdXSzg3UY7xj0000").to_sdata()`


<a id="visium-spatial-gene-expression-ilium-aylvefsm60vfit6z0000"></a>
## Human ilium

- uid: `AYLVeFSm60vFIt6z0000`
- Page: /datasets/visium-spatial-gene-expression-ilium-aylvefsm60vfit6z0000/
- Technology: Visium
- Organism: human
- Tissue: ilium
- Modality: RNA
- Observations (spots): 907
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281317
- Publication: https://doi.org/10.1038/s41586-025-09399-9
- Collections: [geo-gse281317](/collections/md/6.md#geo-gse281317)
- Load: `Catalog().dataset("AYLVeFSm60vFIt6z0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-opc2oi2unpxvvfub0000"></a>
## Human intestine

- uid: `OpC2oI2unpxVvFuB0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-opc2oi2unpxvvfub0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: Crohn disease
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE275144
- Publication: https://doi.org/10.1016/j.cell.2025.08.029
- Collections: [geo-gse275144](/collections/md/4.md#geo-gse275144)
- Load: `Catalog().dataset("OpC2oI2unpxVvFuB0000").to_sdata()`


<a id="visium-spatial-gene-expression-cerebellum-qtu6p8h7qxwasrcg0000"></a>
## Human cerebellum

- uid: `QtU6p8h7QXwasrcG0000`
- Page: /datasets/visium-spatial-gene-expression-cerebellum-qtu6p8h7qxwasrcg0000/
- Technology: Visium
- Organism: human
- Tissue: cerebellum
- Condition: medulloblastoma
- Modality: RNA
- Observations (spots): 3,613
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306506
- Publication: https://doi.org/10.3390/ijms27135720
- Collections: [geo-gse306506](/collections/md/7.md#geo-gse306506)
- Load: `Catalog().dataset("QtU6p8h7QXwasrcG0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-yt2pilxrtubuirr70000"></a>
## Human dorsolateral prefrontal cortex

- uid: `YT2pilxrtubuiRr70000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-yt2pilxrtubuirr70000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("YT2pilxrtubuiRr70000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-xizycdkyxa4dpzvb0000"></a>
## Human lung

- uid: `xIZYcdkyxa4dpZVB0000`
- Page: /datasets/visium-spatial-gene-expression-lung-xizycdkyxa4dpzvb0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 3,271
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310610
- Publication: https://doi.org/10.1038/s41598-025-34594-z
- Collections: [geo-gse310610](/collections/md/9.md#geo-gse310610)
- Load: `Catalog().dataset("xIZYcdkyxa4dpZVB0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-8dv1sd9ogrjcqw800000"></a>
## Mouse colon

- uid: `8dv1Sd9oGRjCqw800000`
- Page: /datasets/visium-spatial-gene-expression-colon-8dv1sd9ogrjcqw800000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colorectal cancer
- Modality: RNA
- Observations (spots): 2,535
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284989
- Publication: https://doi.org/10.3389/fonc.2025.1549237
- Collections: [geo-gse284989](/collections/md/1.md#geo-gse284989)
- Load: `Catalog().dataset("8dv1Sd9oGRjCqw800000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-qsovzb25u6f9hvuw0000"></a>
## Human kidney

- uid: `qsOvZB25u6F9hvuw0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-qsovzb25u6f9hvuw0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: lupus nephritis
- Modality: RNA
- Observations (spots): 900
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333529
- Publication: https://doi.org/10.1093/jimmun/vkag178
- Collections: [geo-gse333529](/collections/md/2.md#geo-gse333529)
- Load: `Catalog().dataset("qsOvZB25u6F9hvuw0000").to_sdata()`


<a id="10x-xenium-skin-of-body-43suqalyhvg1z06f0000"></a>
## Mouse skin of body

- uid: `43suqALYhvg1Z06f0000`
- Page: /datasets/10x-xenium-skin-of-body-43suqalyhvg1z06f0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 45,338
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326753
- Publication: https://doi.org/10.1126/science.aeb3900
- Load: `Catalog().dataset("43suqALYhvg1Z06f0000").to_sdata()`


<a id="mibi-tof-breast-u6djyg4sl3olhibt0000"></a>
## Human breast

- uid: `U6djYg4Sl3OlHIBT0000`
- Page: /datasets/mibi-tof-breast-u6djyg4sl3olhibt0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,482
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("U6djYg4Sl3OlHIBT0000").to_sdata()`


<a id="vizgen-merscope-brain-zugslllxbrtvhmxx0000"></a>
## Mouse brain

- uid: `zuGSlllXbRtvHMXx0000`
- Page: /datasets/vizgen-merscope-brain-zugslllxbrtvhmxx0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 312,003
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319949
- Publication: https://doi.org/10.1093/nar/gkag466
- Load: `Catalog().dataset("zuGSlllXbRtvHMXx0000").to_sdata()`


<a id="vizgen-merscope-brain-qberrr8jz6o8b42l0000"></a>
## Mouse brain

- uid: `QbERRr8Jz6o8B42l0000`
- Page: /datasets/vizgen-merscope-brain-qberrr8jz6o8b42l0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 9,898
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("QbERRr8Jz6o8B42l0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-placenta-ykex2kp2tkyzsrn50000"></a>
## Human placenta

- uid: `yKex2KP2TKYzsRn50000`
- Page: /datasets/maldi-mass-spectrometry-imaging-placenta-ykex2kp2tkyzsrn50000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: placenta
- Modality: Metabolomics
- Observations: 38,800
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2025-12-15_21h10m33s
- Load: `Catalog().dataset("yKex2KP2TKYzsRn50000").to_sdata()`


<a id="mibi-tof-skin-of-body-fzowxvmcp0satrpe0000"></a>
## Human skin of body

- uid: `FZOwXvmcP0SATrpe0000`
- Page: /datasets/mibi-tof-skin-of-body-fzowxvmcp0satrpe0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: skin of body
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,829
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("FZOwXvmcP0SATrpe0000").to_sdata()`


<a id="10x-xenium-rectum-lejaa8kcn0doytwm0000"></a>
## Human rectum

- uid: `lejaa8kcn0DOytWm0000`
- Page: /datasets/10x-xenium-rectum-lejaa8kcn0doytwm0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: rectum
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 48,017
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("lejaa8kcn0DOytWm0000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-ceht1yuddjd4qnsp0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `ceht1YuDdjD4qNsp0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-ceht1yuddjd4qnsp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 68,976
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("ceht1YuDdjD4qNsp0000").to_sdata()`