# SpatialData-DB datasets, shard 38

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-guogxzibt9ga7pvt0000"></a>
## Mouse brain

- uid: `GUoGxzIbT9GA7pvT0000`
- Page: /datasets/visium-spatial-gene-expression-brain-guogxzibt9ga7pvt0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,825
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/mouse-brain-serial-section-2-sagittal-anterior-1-standard-1-1-0
- Load: `Catalog().dataset("GUoGxzIbT9GA7pvT0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-os3hqebasfkkrtmq0000"></a>
## Mouse spinal cord

- uid: `os3hqebASfkKrtMQ0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-os3hqebasfkkrtmq0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 299
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("os3hqebASfkKrtMQ0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-8vkwmonjixdiiaiv0000"></a>
## Mouse spinal cord

- uid: `8vKWMoNjIXdiIaIV0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-8vkwmonjixdiiaiv0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 296
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("8vKWMoNjIXdiIaIV0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-iww4qfcrssd1az5w0000"></a>
## Human kidney

- uid: `iWW4QFCrsSD1AZ5w0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-iww4qfcrssd1az5w0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Modality: RNA
- Observations (spots): 475
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/36776149/
- Publication: https://doi.org/10.1016/j.xgen.2021.100065
- Collections: [doi-10-1016-j-xgen-2021-100065](/collections/md/0.md#doi-10-1016-j-xgen-2021-100065)
- Load: `Catalog().dataset("iWW4QFCrsSD1AZ5w0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-6s561mu5cnjwfvcx0000"></a>
## Human breast

- uid: `6s561mU5cNJwFVCX0000`
- Page: /datasets/visium-spatial-gene-expression-breast-6s561mu5cnjwfvcx0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: RNA
- Observations (spots): 1,295
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE213688
- Publication: https://doi.org/10.1016/j.labinv.2023.100258
- Collections: [geo-gse213688](/collections/md/5.md#geo-gse213688)
- Load: `Catalog().dataset("6s561mU5cNJwFVCX0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-9bkg1vdzi2ptpark0000"></a>
## Mouse liver

- uid: `9BkG1VdZI2PTParK0000`
- Page: /datasets/visium-spatial-gene-expression-liver-9bkg1vdzi2ptpark0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 2,804
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302815
- Publication: https://doi.org/10.1073/pnas.2521923123
- Collections: [geo-gse302815](/collections/md/8.md#geo-gse302815)
- Load: `Catalog().dataset("9BkG1VdZI2PTParK0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-jimfdrpzanydcnka0000"></a>
## Mouse brain

- uid: `jIMFdrpZanydcNKA0000`
- Page: /datasets/visium-spatial-gene-expression-brain-jimfdrpzanydcnka0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Huntington disease
- Modality: RNA
- Observations (spots): 1,915
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285858
- Publication: https://doi.org/10.1016/j.neuron.2025.05.014
- Collections: [geo-gse285858](/collections/md/d.md#geo-gse285858)
- Load: `Catalog().dataset("jIMFdrpZanydcNKA0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-pujdfcs2vtsrlliy0000"></a>
## Human kidney

- uid: `PUjDfCs2VTsRLliy0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-pujdfcs2vtsrlliy0000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 686
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("PUjDfCs2VTsRLliy0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-og4uxrif21b3uvjn0000"></a>
## Mouse colon

- uid: `oG4Uxrif21b3uVjn0000`
- Page: /datasets/visium-spatial-gene-expression-colon-og4uxrif21b3uvjn0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colorectal cancer
- Modality: RNA
- Observations (spots): 2,465
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284989
- Publication: https://doi.org/10.3389/fonc.2025.1549237
- Collections: [geo-gse284989](/collections/md/1.md#geo-gse284989)
- Load: `Catalog().dataset("oG4Uxrif21b3uVjn0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-5bjbkdt5warx6alk0000"></a>
## Mouse liver

- uid: `5BjBKdt5WArX6ALK0000`
- Page: /datasets/visium-spatial-gene-expression-liver-5bjbkdt5warx6alk0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 1,196
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE236424
- Collections: [geo-gse236424](/collections/md/3.md#geo-gse236424)
- Load: `Catalog().dataset("5BjBKdt5WArX6ALK0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreatic-lymph-node-se3b3wx7bn4paeot0000"></a>
## Human pancreatic lymph node

- uid: `SE3b3wx7BN4PAEoT0000`
- Page: /datasets/visium-spatial-gene-expression-pancreatic-lymph-node-se3b3wx7bn4paeot0000/
- Technology: Visium
- Organism: human
- Tissue: pancreatic lymph node
- Condition: type 1 diabetes mellitus
- Modality: RNA
- Observations (spots): 2,475
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296626
- Publication: https://doi.org/10.1101/2025.05.19.654940
- Collections: [geo-gse296626](/collections/md/0.md#geo-gse296626)
- Load: `Catalog().dataset("SE3b3wx7BN4PAEoT0000").to_sdata()`


<a id="visium-spatial-gene-expression-locus-ceruleus-clm0fn3w6habfduy0000"></a>
## Human locus ceruleus

- uid: `CLM0fn3W6HAbFduY0000`
- Page: /datasets/visium-spatial-gene-expression-locus-ceruleus-clm0fn3w6habfduy0000/
- Technology: Visium
- Organism: human
- Tissue: locus ceruleus
- Modality: RNA
- Observations (spots): 3,505
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327441
- Publication: https://doi.org/10.1186/s40478-026-02287-x
- Collections: [geo-gse327441](/collections/md/c.md#geo-gse327441)
- Load: `Catalog().dataset("CLM0fn3W6HAbFduY0000").to_sdata()`


<a id="visium-spatial-gene-expression-cephalic-vein-epulpplziql85yav0000"></a>
## Dog cephalic vein

- uid: `EPulpplZIqL85yAV0000`
- Page: /datasets/visium-spatial-gene-expression-cephalic-vein-epulpplziql85yav0000/
- Technology: Visium
- Organism: dog
- Tissue: cephalic vein
- Modality: RNA
- Observations (spots): 725
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189155
- Load: `Catalog().dataset("EPulpplZIqL85yAV0000").to_sdata()`


<a id="visium-spatial-gene-expression-lymph-node-1p7omqw1gacy1jhz0000"></a>
## Human lymph node

- uid: `1p7omQW1GACy1JHz0000`
- Page: /datasets/visium-spatial-gene-expression-lymph-node-1p7omqw1gacy1jhz0000/
- Technology: Visium
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: RNA
- Observations (spots): 378
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8324907
- Collections: [geo-gse269695](/collections/md/b.md#geo-gse269695)
- Load: `Catalog().dataset("1p7omQW1GACy1JHz0000").to_sdata()`


<a id="visium-spatial-gene-expression-locus-ceruleus-ashb1ewyuififgxs0000"></a>
## Human locus ceruleus

- uid: `AsHB1EwyUiFiFgXs0000`
- Page: /datasets/visium-spatial-gene-expression-locus-ceruleus-ashb1ewyuififgxs0000/
- Technology: Visium
- Organism: human
- Tissue: locus ceruleus
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307866
- Publication: https://doi.org/10.1101/2025.10.29.685354
- Collections: [geo-gse307866](/collections/md/9.md#geo-gse307866)
- Load: `Catalog().dataset("AsHB1EwyUiFiFgXs0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-fknzvjc8qqhrda7t0000"></a>
## Mouse brain

- uid: `FKNzvjC8QqHrdA7t0000`
- Page: /datasets/visium-spatial-gene-expression-brain-fknzvjc8qqhrda7t0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 3,256
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282203
- Publication: https://doi.org/10.64898/2026.01.26.701799
- Collections: [geo-gse282203](/collections/md/3.md#geo-gse282203)
- Load: `Catalog().dataset("FKNzvjC8QqHrdA7t0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-mu7zq5pl1xcmc3v80000"></a>
## Human brain

- uid: `MU7ZQ5PL1xcmC3V80000`
- Page: /datasets/visium-spatial-gene-expression-brain-mu7zq5pl1xcmc3v80000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 1,420
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9497620
- Collections: [geo-gse318562](/collections/md/3.md#geo-gse318562)
- Load: `Catalog().dataset("MU7ZQ5PL1xcmC3V80000").to_sdata()`


<a id="merfish-brain-cikl01mcm95clg7l0000"></a>
## Mouse brain

- uid: `cikL01mcm95clG7L0000`
- Page: /datasets/merfish-brain-cikl01mcm95clg7l0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 16,663
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("cikL01mcm95clG7L0000").to_sdata()`


<a id="vizgen-merscope-white-matter-lknbfqgwf3oremeh0000"></a>
## Human white matter

- uid: `lkNBfQGWf3oRemEh0000`
- Page: /datasets/vizgen-merscope-white-matter-lknbfqgwf3oremeh0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (cells): 35,559
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284005
- Publication: https://doi.org/10.1016/j.immuni.2025.10.003
- Collections: [geo-gse284005](/collections/md/2.md#geo-gse284005)
- Load: `Catalog().dataset("lkNBfQGWf3oRemEh0000").to_sdata()`


<a id="10x-xenium-synovial-membrane-of-synovial-joint-pmbmo4mdbuhdswoe0000"></a>
## Human synovial membrane of synovial joint

- uid: `PmbMo4MdbuhdSWOe0000`
- Page: /datasets/10x-xenium-synovial-membrane-of-synovial-joint-pmbmo4mdbuhdswoe0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: synovial membrane of synovial joint
- Condition: oligoarticular juvenile idiopathic arthritis
- Modality: RNA
- Observations (cells): 63,041
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326837
- Publication: https://doi.org/10.1172/jci.insight.198074
- Load: `Catalog().dataset("PmbMo4MdbuhdSWOe0000").to_sdata()`


<a id="mibi-tof-breast-uo1zcel3s5dynk7z0000"></a>
## Human breast

- uid: `uO1zCEl3s5dynK7Z0000`
- Page: /datasets/mibi-tof-breast-uo1zcel3s5dynk7z0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,618
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("uO1zCEl3s5dynK7Z0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-spleen-pyqdnird456mojdq0000"></a>
## Mouse spleen

- uid: `PYqDnIRd456mOJdQ0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-spleen-pyqdnird456mojdq0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: spleen
- Modality: Metabolomics
- Observations: 90,209
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2026-09-01_16h04m13s
- Load: `Catalog().dataset("PYqDnIRd456mOJdQ0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-xxonqtzbxpihgmnx0000"></a>
## Human lymph node

- uid: `xxonqTZbxPIHGMNx0000`
- Page: /datasets/phenocycler-fusion-lymph-node-xxonqtzbxpihgmnx0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 11,580
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("xxonqTZbxPIHGMNx0000").to_sdata()`


<a id="10x-xenium-skin-of-body-rq6aprmh1wzscwfj0000"></a>
## Human skin of body

- uid: `Rq6aPrMH1wzsCWfJ0000`
- Page: /datasets/10x-xenium-skin-of-body-rq6aprmh1wzscwfj0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: skin of body
- Condition: drug allergy
- Modality: RNA
- Observations (cells): 20,879
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE309154
- Load: `Catalog().dataset("Rq6aPrMH1wzsCWfJ0000").to_sdata()`