# SpatialData-DB datasets, shard 35

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="10x-xenium-breast-d9nseackif6fl9nh0000"></a>
## Human breast

- uid: `d9nSeAcKiF6fL9NH0000`
- Page: /datasets/10x-xenium-breast-d9nseackif6fl9nh0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (cells): 892,966
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/ffpe-human-breast-using-the-entire-sample-area-1-standard
- Load: `Catalog().dataset("d9nSeAcKiF6fL9NH0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-hkd9oa67tosjjnyn0000"></a>
## Mouse brain

- uid: `hkD9oA67tOSJJNyN0000`
- Page: /datasets/visium-spatial-gene-expression-brain-hkd9oa67tosjjnyn0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,150
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319409
- Publication: https://doi.org/10.1186/s40478-025-02219-1
- Collections: [geo-gse319409](/collections/md/8.md#geo-gse319409)
- Load: `Catalog().dataset("hkD9oA67tOSJJNyN0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-kzml10xkkgu9naor0000"></a>
## Mouse lung

- uid: `kZmL10XKkgU9NAOR0000`
- Page: /datasets/visium-spatial-gene-expression-lung-kzml10xkkgu9naor0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: mycobacterial infectious disease
- Modality: RNA
- Observations (spots): 3,801
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297621
- Publication: https://doi.org/10.1038/s41467-025-61791-1
- Collections: [geo-gse297621](/collections/md/7.md#geo-gse297621)
- Load: `Catalog().dataset("kZmL10XKkgU9NAOR0000").to_sdata()`


<a id="spatial-transcriptomics-breast-r4luimfcgdvuxurz0000"></a>
## Human breast

- uid: `R4luImfCGdvuxurz0000`
- Page: /datasets/spatial-transcriptomics-breast-r4luimfcgdvuxurz0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 357
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("R4luImfCGdvuxurz0000").to_sdata()`


<a id="spatial-transcriptomics-breast-dcobknpllt6vysca0000"></a>
## Human breast

- uid: `DcobKNPLlt6vYSCa0000`
- Page: /datasets/spatial-transcriptomics-breast-dcobknpllt6vysca0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 284
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aaf2403
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("DcobKNPLlt6vYSCa0000").to_sdata()`


<a id="spatial-transcriptomics-breast-tkftyhvsvqxqt9sj0000"></a>
## Human breast

- uid: `TKFTyhVSvqXQt9sj0000`
- Page: /datasets/spatial-transcriptomics-breast-tkftyhvsvqxqt9sj0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 325
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/34650042/
- Publication: https://doi.org/10.1038/s41467-021-26271-2
- Collections: [doi-10-1038-s41467-021-26271-2](/collections/md/6.md#doi-10-1038-s41467-021-26271-2)
- Load: `Catalog().dataset("TKFTyhVSvqXQt9sj0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-l9iibhomj0shdmq50000"></a>
## Mouse spinal cord

- uid: `L9iiBHOMJ0shdMq50000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-l9iibhomj0shdmq50000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 304
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("L9iiBHOMJ0shdMq50000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-hynjoejdoszt1izy0000"></a>
## Human brain

- uid: `HYnJOEJDoszt1iZy0000`
- Page: /datasets/visium-spatial-gene-expression-brain-hynjoejdoszt1izy0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (spots): 2,961
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://academic.oup.com/neuro-oncology/article/24/Supplement_1/i45/6600572
- Publication: https://doi.org/10.1093/neuonc/noac079.165
- Collections: [doi-10-1093-neuonc-noac079-165](/collections/md/6.md#doi-10-1093-neuonc-noac079-165)
- Load: `Catalog().dataset("HYnJOEJDoszt1iZy0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-jusrnmic7wyph9lg0000"></a>
## Mouse spinal cord

- uid: `jUSRNMIC7wypH9lG0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-jusrnmic7wyph9lg0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 303
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("jUSRNMIC7wypH9lG0000").to_sdata()`


<a id="visium-spatial-gene-expression-spinal-cord-2mmod7amczyvivcy0000"></a>
## Mouse spinal cord

- uid: `2MMoD7aMcZYVIvcy0000`
- Page: /datasets/visium-spatial-gene-expression-spinal-cord-2mmod7amczyvivcy0000/
- Technology: Visium
- Organism: mouse
- Tissue: spinal cord
- Modality: RNA
- Observations (spots): 710
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-022-05385-7
- Publication: https://doi.org/10.1038/s41586-022-05385-7
- Collections: [doi-10-1038-s41586-022-05385-7](/collections/md/a.md#doi-10-1038-s41586-022-05385-7)
- Load: `Catalog().dataset("2MMoD7aMcZYVIvcy0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-muetbogzxsjmbkla0000"></a>
## Human brain

- uid: `mueTboGZxsjmbkLA0000`
- Page: /datasets/visium-spatial-gene-expression-brain-muetbogzxsjmbkla0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: Parkinson disease
- Modality: RNA
- Observations (spots): 4,984
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41587-023-01937-y
- Publication: https://doi.org/10.1038/s41587-023-01937-y
- Collections: [doi-10-1038-s41587-023-01937-y](/collections/md/b.md#doi-10-1038-s41587-023-01937-y)
- Load: `Catalog().dataset("mueTboGZxsjmbkLA0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-knfefxc24u7bzq6j0000"></a>
## Human brain

- uid: `kNFEfxC24u7BZQ6J0000`
- Page: /datasets/visium-spatial-gene-expression-brain-knfefxc24u7bzq6j0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: brain glioma
- Modality: RNA
- Observations (spots): 3,666
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE242352
- Publication: https://doi.org/10.1038/s41467-025-59805-z
- Collections: [geo-gse242352](/collections/md/d.md#geo-gse242352)
- Load: `Catalog().dataset("kNFEfxC24u7BZQ6J0000").to_sdata()`


<a id="visium-spatial-gene-expression-uterus-hiazuqgurnbuci1d0000"></a>
## Mouse uterus

- uid: `HIazuqGUrNBuci1D0000`
- Page: /datasets/visium-spatial-gene-expression-uterus-hiazuqgurnbuci1d0000/
- Technology: Visium
- Organism: mouse
- Tissue: uterus
- Modality: RNA
- Observations (spots): 662
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274059
- Publication: https://doi.org/10.1038/s41419-026-08485-8
- Collections: [geo-gse274059](/collections/md/d.md#geo-gse274059)
- Load: `Catalog().dataset("HIazuqGUrNBuci1D0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-m6uspmesdld9wn2c0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `M6uSPMesdLd9wn2C0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-m6uspmesdld9wn2c0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("M6uSPMesdLd9wn2C0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-tqezqzfmakr4zvpi0000"></a>
## Mouse lung

- uid: `TQezqzFMAkR4zVPi0000`
- Page: /datasets/visium-spatial-gene-expression-lung-tqezqzfmakr4zvpi0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Modality: RNA
- Observations (spots): 2,407
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("TQezqzFMAkR4zVPi0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-cs4t1a2gc9plqyha0000"></a>
## Human skin of body

- uid: `CS4t1a2gc9pLqyha0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-cs4t1a2gc9plqyha0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 1,728
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189297
- Collections: [geo-gse263298](/collections/md/5.md#geo-gse263298)
- Load: `Catalog().dataset("CS4t1a2gc9pLqyha0000").to_sdata()`


<a id="visium-spatial-gene-expression-bile-duct-lsxdmnzsc2siehos0001"></a>
## Human bile duct

- uid: `lSxDmNzSC2siehos0001`
- Page: /datasets/visium-spatial-gene-expression-bile-duct-lsxdmnzsc2siehos0001/
- Technology: Visium
- Organism: human
- Tissue: bile duct
- Condition: cholangiocarcinoma
- Modality: RNA
- Observations (spots): 1,040
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE316402
- Collections: [geo-gse316402](/collections/md/6.md#geo-gse316402)
- Load: `Catalog().dataset("lSxDmNzSC2siehos0001").to_sdata()`


<a id="visium-spatial-gene-expression-ectocervix-jntj6vp8douob0nu0000"></a>
## Human ectocervix

- uid: `JnTj6VP8DoUob0Nu0000`
- Page: /datasets/visium-spatial-gene-expression-ectocervix-jntj6vp8douob0nu0000/
- Technology: Visium
- Organism: human
- Tissue: ectocervix
- Modality: RNA
- Observations (spots): 712
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9044531
- Collections: [geo-gse299708](/collections/md/a.md#geo-gse299708)
- Load: `Catalog().dataset("JnTj6VP8DoUob0Nu0000").to_sdata()`


<a id="10x-xenium-rectum-dkbkwpz8do4orcx90000"></a>
## Human rectum

- uid: `DKbkWpZ8do4orcX90000`
- Page: /datasets/10x-xenium-rectum-dkbkwpz8do4orcx90000/
- Technology: 10x Xenium
- Organism: human
- Tissue: rectum
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 60,961
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE312420
- Publication: https://doi.org/10.1038/s41467-026-72482-w
- Load: `Catalog().dataset("DKbkWpZ8do4orcX90000").to_sdata()`


<a id="visium-spatial-gene-expression-lymph-node-kihsfxjuhiiyaeyn0000"></a>
## Human lymph node

- uid: `kIhsFXJUHiIYaeyN0000`
- Page: /datasets/visium-spatial-gene-expression-lymph-node-kihsfxjuhiiyaeyn0000/
- Technology: Visium
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: RNA
- Observations (spots): 1,197
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE276542
- Publication: https://doi.org/10.1080/2162402X.2026.2660418
- Collections: [geo-gse276542](/collections/md/2.md#geo-gse276542)
- Load: `Catalog().dataset("kIhsFXJUHiIYaeyN0000").to_sdata()`


<a id="vizgen-merscope-pancreas-n3myk7zosjvbxu3y0000"></a>
## Human pancreas

- uid: `N3MyK7ZOSjvBXU3y0000`
- Page: /datasets/vizgen-merscope-pancreas-n3myk7zosjvbxu3y0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: pancreas
- Modality: RNA
- Observations (cells): 31,523
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333737
- Publication: https://doi.org/10.64898/2026.06.30.733275
- Collections: [geo-gse333737](/collections/md/9.md#geo-gse333737)
- Load: `Catalog().dataset("N3MyK7ZOSjvBXU3y0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-c1ebkjkhctm8ckbw0000"></a>
## Human kidney

- uid: `C1eBKjkhcTm8CKbw0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-c1ebkjkhctm8ckbw0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 5,644
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2019-01-31_23h01m39s
- Load: `Catalog().dataset("C1eBKjkhcTm8CKbw0000").to_sdata()`


<a id="vizgen-merscope-brain-5jnjxam8oq6fgkyd0000"></a>
## Mouse brain

- uid: `5JNJXAm8Oq6fGKyd0000`
- Page: /datasets/vizgen-merscope-brain-5jnjxam8oq6fgkyd0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 12,920
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329718
- Load: `Catalog().dataset("5JNJXAm8Oq6fGKyd0000").to_sdata()`


<a id="mibi-tof-lymph-node-xtbcxpgxz91czynq0000"></a>
## Human lymph node

- uid: `XTbCxPGXZ91CZyNQ0000`
- Page: /datasets/mibi-tof-lymph-node-xtbcxpgxz91czynq0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,318
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("XTbCxPGXZ91CZyNQ0000").to_sdata()`


<a id="mibi-tof-breast-ohr3vujavuzllrol0000"></a>
## Human breast

- uid: `ohR3vUJaVUZLLROL0000`
- Page: /datasets/mibi-tof-breast-ohr3vujavuzllrol0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,492
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("ohR3vUJaVUZLLROL0000").to_sdata()`


<a id="10x-xenium-lung-0f4r15xbqm1fhqfi0000"></a>
## Mouse lung

- uid: `0F4R15XBqM1fhQFi0000`
- Page: /datasets/10x-xenium-lung-0f4r15xbqm1fhqfi0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: lung
- Condition: pulmonary fibrosis
- Modality: RNA
- Observations (cells): 155,374
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325253
- Publication: https://doi.org/10.1126/scitranslmed.ads2673
- Load: `Catalog().dataset("0F4R15XBqM1fhQFi0000").to_sdata()`


<a id="vizgen-merscope-brain-x7cqps4xll8pxfoe0000"></a>
## Mouse brain

- uid: `x7cqPS4Xll8pXfoe0000`
- Page: /datasets/vizgen-merscope-brain-x7cqps4xll8pxfoe0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 201,299
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("x7cqPS4Xll8pXfoe0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-enlkt2qby3hj1p8u0000"></a>
## Human lymph node

- uid: `ENLKt2Qby3HJ1P8U0000`
- Page: /datasets/phenocycler-fusion-lymph-node-enlkt2qby3hj1p8u0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: Burkitt lymphoma
- Modality: protein
- Observations (cells): 10,154
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("ENLKt2Qby3HJ1P8U0000").to_sdata()`


<a id="10x-xenium-fallopian-tube-vvbriprwomffcqu50000"></a>
## Human fallopian tube

- uid: `vVbRiPrwOmffCqU50000`
- Page: /datasets/10x-xenium-fallopian-tube-vvbriprwomffcqu50000/
- Technology: 10x Xenium
- Organism: human
- Tissue: fallopian tube
- Condition: ovarian cancer
- Modality: RNA
- Observations (cells): 716,027
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE344584
- Load: `Catalog().dataset("vVbRiPrwOmffCqU50000").to_sdata()`


<a id="mibi-tof-liver-znsmeeibzlwrs4fb0000"></a>
## Human liver

- uid: `ZnSmEeibzlwRs4fb0000`
- Page: /datasets/mibi-tof-liver-znsmeeibzlwrs4fb0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: liver
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,280
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("ZnSmEeibzlwRs4fb0000").to_sdata()`