# SpatialData-DB datasets, shard 32

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-colon-k3y4wdsggesejx9t0000"></a>
## Human colon

- uid: `K3y4WdsggesEJx9t0000`
- Page: /datasets/visium-spatial-gene-expression-colon-k3y4wdsggesejx9t0000/
- Technology: Visium
- Organism: human
- Tissue: colon
- Modality: RNA
- Observations (spots): 2,638
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/platforms/visium/product-family/dataset-human-crc
- Publication: https://doi.org/10.1038/s41588-025-02193-3
- Collections: [oliveira-2024-colorectal](/collections/md/b.md#oliveira-2024-colorectal)
- Load: `Catalog().dataset("K3y4WdsggesEJx9t0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-doqbyawwfpihcnys0000"></a>
## Mouse spinal cord

- uid: `DOQbYAwWfPihcnyS0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-doqbyawwfpihcnys0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 157
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("DOQbYAwWfPihcnyS0000").to_sdata()`


<a id="spatial-transcriptomics-brain-ma54upzdoyxkb2pf0000"></a>
## Mouse brain

- uid: `MA54UpzDoyXKB2pF0000`
- Page: /datasets/spatial-transcriptomics-brain-ma54upzdoyxkb2pf0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 281
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/27365449/
- Publication: https://doi.org/10.1126/science.aaf2403
- Collections: [doi-10-1126-science-aaf2403](/collections/md/4.md#doi-10-1126-science-aaf2403)
- Load: `Catalog().dataset("MA54UpzDoyXKB2pF0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-wbr4yxwse3escqo30000"></a>
## Human kidney

- uid: `WbR4YXWSe3EscqO30000`
- Page: /datasets/visium-spatial-gene-expression-kidney-wbr4yxwse3escqo30000/
- Technology: Visium
- Organism: human
- Tissue: kidney
- Condition: pauci-immune glomerulonephritis with ANCA
- Modality: RNA
- Observations (spots): 632
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250138
- Publication: https://doi.org/10.1038/s41467-024-52525-w
- Collections: [geo-gse250138](/collections/md/e.md#geo-gse250138)
- Load: `Catalog().dataset("WbR4YXWSe3EscqO30000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-9to4p2bmpe2lasbn0000"></a>
## Human prostate gland

- uid: `9to4P2bMPE2LASbN0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-9to4p2bmpe2lasbn0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 4,828
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("9to4P2bMPE2LASbN0000").to_sdata()`


<a id="10x-xenium-liver-w3zppeofvctddlbv0000"></a>
## Human liver

- uid: `W3ZpPeOfvctDDlBV0000`
- Page: /datasets/10x-xenium-liver-w3zppeofvctddlbv0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: liver
- Modality: RNA
- Observations (cells): 224,957
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8386295
- Publication: https://doi.org/10.1038/s41588-026-02671-2
- Collections: [geo-gse271824](/collections/md/9.md#geo-gse271824)
- Load: `Catalog().dataset("W3ZpPeOfvctDDlBV0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-ozklzvvhlmoevkf70000"></a>
## Rat heart

- uid: `OzkLzvVhlMOEvKF70000`
- Page: /datasets/visium-spatial-gene-expression-heart-ozklzvvhlmoevkf70000/
- Technology: Visium
- Organism: rat
- Tissue: heart
- Condition: myocardial infarction
- Modality: RNA
- Observations (spots): 3,675
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299772
- Publication: https://doi.org/10.1101/2025.11.08.687255
- Collections: [geo-gse299772](/collections/md/2.md#geo-gse299772)
- Load: `Catalog().dataset("OzkLzvVhlMOEvKF70000").to_sdata()`


<a id="10x-xenium-uterus-mxs4dan4krg2lkp00000"></a>
## Mouse uterus

- uid: `mxS4DAn4krG2LkP00000`
- Page: /datasets/10x-xenium-uterus-mxs4dan4krg2lkp00000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: uterus
- Modality: RNA
- Observations (cells): 125,554
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9457931
- Publication: https://doi.org/10.1073/pnas.2600524123
- Collections: [geo-gse316662](/collections/md/f.md#geo-gse316662)
- Load: `Catalog().dataset("mxS4DAn4krG2LkP00000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-k2bk3x2vryuyautv0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `K2Bk3x2vrYUyAUTv0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-k2bk3x2vryuyautv0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: bipolar disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("K2Bk3x2vrYUyAUTv0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-q94rrs0kfhvg5qoq0000"></a>
## Mouse lung

- uid: `Q94rrS0KFhVG5qOq0000`
- Page: /datasets/visium-spatial-gene-expression-lung-q94rrs0kfhvg5qoq0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: pulmonary fibrosis
- Modality: RNA
- Observations (spots): 1,734
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7454045
- Collections: [geo-gse234198](/collections/md/6.md#geo-gse234198)
- Load: `Catalog().dataset("Q94rrS0KFhVG5qOq0000").to_sdata()`


<a id="visium-spatial-gene-expression-lymph-node-byvzsk1g1x7hkldc0000"></a>
## Human lymph node

- uid: `byvZSk1G1X7hkLDc0000`
- Page: /datasets/visium-spatial-gene-expression-lymph-node-byvzsk1g1x7hkldc0000/
- Technology: Visium
- Organism: human
- Tissue: lymph node
- Condition: breast cancer
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5732357
- Collections: [geo-gse190811](/collections/md/1.md#geo-gse190811)
- Load: `Catalog().dataset("byvZSk1G1X7hkLDc0000").to_sdata()`


<a id="mibi-tof-breast-cwbexmbr3gi5utvv0000"></a>
## Human breast

- uid: `CwbeXmbR3GI5uTvV0000`
- Page: /datasets/mibi-tof-breast-cwbexmbr3gi5utvv0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,554
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("CwbeXmbR3GI5uTvV0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-euhbhnnyllugqoi70000"></a>
## Mouse intestine

- uid: `EUHbHNNylLugQOi70000`
- Page: /datasets/visium-spatial-gene-expression-intestine-euhbhnnyllugqoi70000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 2,307
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320442
- Collections: [geo-gse320442](/collections/md/7.md#geo-gse320442)
- Load: `Catalog().dataset("EUHbHNNylLugQOi70000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-i4fwebemktkictnf0000"></a>
## Rat brain

- uid: `i4FwEbEmkTKIctNF0000`
- Page: /datasets/visium-spatial-gene-expression-brain-i4fwebemktkictnf0000/
- Technology: Visium
- Organism: rat
- Tissue: brain
- Condition: temporal lobe epilepsy
- Modality: RNA
- Observations (spots): 3,480
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE301260
- Publication: https://doi.org/10.1186/s40478-026-02224-y
- Collections: [geo-gse301260](/collections/md/f.md#geo-gse301260)
- Load: `Catalog().dataset("i4FwEbEmkTKIctNF0000").to_sdata()`


<a id="vizgen-merscope-white-matter-da2uzo9jwzt9a6zh0000"></a>
## Human white matter

- uid: `da2UzO9Jwzt9A6zH0000`
- Page: /datasets/vizgen-merscope-white-matter-da2uzo9jwzt9a6zh0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: white matter
- Condition: multiple sclerosis
- Modality: RNA
- Observations (cells): 25,153
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284005
- Publication: https://doi.org/10.1016/j.immuni.2025.10.003
- Collections: [geo-gse284005](/collections/md/2.md#geo-gse284005)
- Load: `Catalog().dataset("da2UzO9Jwzt9A6zH0000").to_sdata()`


<a id="mibi-tof-lymph-node-czlb64g2bdtclysh0000"></a>
## Human lymph node

- uid: `cZlb64g2BdTclYSH0000`
- Page: /datasets/mibi-tof-lymph-node-czlb64g2bdtclysh0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,250
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("cZlb64g2BdTclYSH0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-0yfaybstl7fav51c0000"></a>
## Human lymph node

- uid: `0YfaybsTl7fAV51C0000`
- Page: /datasets/phenocycler-fusion-lymph-node-0yfaybstl7fav51c0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 19,890
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("0YfaybsTl7fAV51C0000").to_sdata()`


<a id="10x-xenium-lung-otx9taxmqoyk1eeg0000"></a>
## Human lung

- uid: `Otx9TaXMqOyk1eEG0000`
- Page: /datasets/10x-xenium-lung-otx9taxmqoyk1eeg0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (cells): 52,872
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311609
- Publication: https://doi.org/10.1038/s41592-026-03089-8
- Load: `Catalog().dataset("Otx9TaXMqOyk1eEG0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-gwdxm1rc56s4heco0000"></a>
## Human lymph node

- uid: `Gwdxm1rc56S4hEco0000`
- Page: /datasets/phenocycler-fusion-lymph-node-gwdxm1rc56s4heco0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: diffuse large B-cell lymphoma
- Modality: protein
- Observations (cells): 10,572
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("Gwdxm1rc56S4hEco0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-brain-skogvhktlwavz44a0000"></a>
## Mouse brain

- uid: `SkoGVhktlWaVz44A0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-brain-skogvhktlwavz44a0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: brain
- Modality: Metabolomics
- Observations: 54,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-08-24_12h00m43s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("SkoGVhktlWaVz44A0000").to_sdata()`


<a id="10x-xenium-nucleus-accumbens-6wajkpyx6h586cyx0000"></a>
## Human nucleus accumbens

- uid: `6waJKpYX6H586cYX0000`
- Page: /datasets/10x-xenium-nucleus-accumbens-6wajkpyx6h586cyx0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: nucleus accumbens
- Modality: RNA
- Observations (cells): 188,503
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325489
- Publication: https://doi.org/10.1016/j.neuron.2026.06.002
- Load: `Catalog().dataset("6waJKpYX6H586cYX0000").to_sdata()`


<a id="mibi-tof-breast-2mj64uwrwoxb1hq50000"></a>
## Human breast

- uid: `2mj64UWrwOXb1HQ50000`
- Page: /datasets/mibi-tof-breast-2mj64uwrwoxb1hq50000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,900
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("2mj64UWrwOXb1HQ50000").to_sdata()`