# SpatialData-DB datasets, shard 30

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-brain-3bkzlifriucypvaa0000"></a>
## Mouse brain

- uid: `3BkzLifriuCYpVAa0000`
- Page: /datasets/visium-spatial-gene-expression-brain-3bkzlifriucypvaa0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 8,462
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/ffpe-visium-on-cytassist-mouse-brain-probe-based-whole-transcriptome-profiling-2-standard
- Load: `Catalog().dataset("3BkzLifriuCYpVAa0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-dqoymvbflrfmqns10000"></a>
## Human intestine

- uid: `dqoYmVBflrFMqNs10000`
- Page: /datasets/visium-spatial-gene-expression-intestine-dqoymvbflrfmqns10000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: colon adenocarcinoma
- Modality: RNA
- Observations (spots): 3,731
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.cell.com/cell/fulltext/S0092-8674(23)01222-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867423012229%3Fshowall%3Dtrue#secsectitle0020
- Publication: https://doi.org/10.1016/j.cell.2023.11.006
- Collections: [doi-10-1016-j-cell-2023-11-006](/collections/md/1.md#doi-10-1016-j-cell-2023-11-006)
- Load: `Catalog().dataset("dqoYmVBflrFMqNs10000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-tyg9tnvdcluggjrm0000"></a>
## Mouse brain

- uid: `tyg9tnvdcLuGgjrm0000`
- Page: /datasets/visium-spatial-gene-expression-brain-tyg9tnvdcluggjrm0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,964
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41587-023-01937-y
- Publication: https://doi.org/10.1038/s41587-023-01937-y
- Collections: [doi-10-1038-s41587-023-01937-y](/collections/md/b.md#doi-10-1038-s41587-023-01937-y)
- Load: `Catalog().dataset("tyg9tnvdcLuGgjrm0000").to_sdata()`


<a id="visium-spatial-gene-expression-heart-v9caeuciirpir55c0000"></a>
## Human heart

- uid: `v9CAeuciirPIR55C0000`
- Page: /datasets/visium-spatial-gene-expression-heart-v9caeuciirpir55c0000/
- Technology: Visium
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 2,073
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41586-023-06311-1#data-availability
- Publication: https://doi.org/10.1038/s41586-023-06311-1
- Collections: [doi-10-1038-s41586-023-06311-1](/collections/md/f.md#doi-10-1038-s41586-023-06311-1)
- Load: `Catalog().dataset("v9CAeuciirPIR55C0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-md70nfl5xxei7tbf0000"></a>
## Human brain

- uid: `mD70NFl5xxei7tBF0000`
- Page: /datasets/visium-spatial-gene-expression-brain-md70nfl5xxei7tbf0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: glioblastoma
- Modality: RNA
- Observations (spots): 2,494
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE235672
- Publication: https://doi.org/10.1038/s43018-023-00598-9
- Collections: [geo-gse235672](/collections/md/b.md#geo-gse235672)
- Load: `Catalog().dataset("mD70NFl5xxei7tBF0000").to_sdata()`


<a id="visium-spatial-gene-expression-temporal-cortex-fmtjuxwnl0uiadrj0000"></a>
## Human temporal cortex

- uid: `fMtJuxWnL0UIaDrJ0000`
- Page: /datasets/visium-spatial-gene-expression-temporal-cortex-fmtjuxwnl0uiadrj0000/
- Technology: Visium
- Organism: human
- Tissue: temporal cortex
- Condition: Lewy body dementia
- Modality: RNA
- Observations (spots): 10,187
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293896
- Publication: https://doi.org/10.1007/s00401-026-02981-z
- Collections: [geo-gse293896](/collections/md/f.md#geo-gse293896)
- Load: `Catalog().dataset("fMtJuxWnL0UIaDrJ0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-o7ywm8s59nfgtflu0000"></a>
## Human basal ganglion

- uid: `O7YwM8S59NFgTFLU0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-o7ywm8s59nfgtflu0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 100,119
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("O7YwM8S59NFgTFLU0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-spfqzjig5nucwbho0000"></a>
## Mouse liver

- uid: `SPfqzjiG5nUCWBHo0000`
- Page: /datasets/visium-spatial-gene-expression-liver-spfqzjig5nucwbho0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: metabolic dysfunction-associated steatohepatitis
- Modality: RNA
- Observations (spots): 1,396
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE248077
- Collections: [geo-gse248077](/collections/md/f.md#geo-gse248077)
- Load: `Catalog().dataset("SPfqzjiG5nUCWBHo0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-xpalyi6xfzabznh10000"></a>
## Mouse lung

- uid: `xPALYi6xfzABznh10000`
- Page: /datasets/visium-spatial-gene-expression-lung-xpalyi6xfzabznh10000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: lung cancer
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295967
- Collections: [geo-gse295967](/collections/md/1.md#geo-gse295967)
- Load: `Catalog().dataset("xPALYi6xfzABznh10000").to_sdata()`


<a id="visium-spatial-gene-expression-gastrocnemius-mmzbdvh4gcp35xwn0000"></a>
## Mouse gastrocnemius

- uid: `mmZbdvH4gcP35XWn0000`
- Page: /datasets/visium-spatial-gene-expression-gastrocnemius-mmzbdvh4gcp35xwn0000/
- Technology: Visium
- Organism: mouse
- Tissue: gastrocnemius
- Condition: Duchenne muscular dystrophy
- Modality: RNA
- Observations (spots): 4,986
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE297388
- Publication: https://doi.org/10.1186/s13395-026-00429-2
- Collections: [geo-gse297388](/collections/md/7.md#geo-gse297388)
- Load: `Catalog().dataset("mmZbdvH4gcP35XWn0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-bpfmacokzyoe9clf0000"></a>
## Human skin of body

- uid: `bPfmaCokZYOe9clf0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-bpfmacokzyoe9clf0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: acute myeloid leukemia
- Modality: RNA
- Observations (spots): 1,442
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8576305
- Collections: [geo-gse279576](/collections/md/c.md#geo-gse279576)
- Load: `Catalog().dataset("bPfmaCokZYOe9clf0000").to_sdata()`


<a id="visium-spatial-gene-expression-ilium-xx8rsebsjsnsxgl00000"></a>
## Human ilium

- uid: `XX8RSeBsJsNsxGL00000`
- Page: /datasets/visium-spatial-gene-expression-ilium-xx8rsebsjsnsxgl00000/
- Technology: Visium
- Organism: human
- Tissue: ilium
- Modality: RNA
- Observations (spots): 150
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE281317
- Publication: https://doi.org/10.1038/s41586-025-09399-9
- Collections: [geo-gse281317](/collections/md/6.md#geo-gse281317)
- Load: `Catalog().dataset("XX8RSeBsJsNsxGL00000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-bllef0eipdyma9lw0000"></a>
## Human skin of body

- uid: `BLlef0eIPDyMA9LW0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-bllef0eipdyma9lw0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: cutaneous leishmaniasis
- Modality: RNA
- Observations (spots): 1,109
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8189295
- Collections: [geo-gse263298](/collections/md/5.md#geo-gse263298)
- Load: `Catalog().dataset("BLlef0eIPDyMA9LW0000").to_sdata()`


<a id="visium-spatial-gene-expression-thyroid-gland-droaaa3mqjrvusik0000"></a>
## Human thyroid gland

- uid: `drOAaa3mQjrVUsIK0000`
- Page: /datasets/visium-spatial-gene-expression-thyroid-gland-droaaa3mqjrvusik0000/
- Technology: Visium
- Organism: human
- Tissue: thyroid gland
- Condition: Hashimoto thyroiditis
- Modality: RNA
- Observations (spots): 3,154
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM7221916
- Collections: [geo-gse230424](/collections/md/1.md#geo-gse230424)
- Load: `Catalog().dataset("drOAaa3mQjrVUsIK0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-o75ioak2kprvsagq0000"></a>
## Mouse brain

- uid: `O75IOak2kPrVSaGQ0000`
- Page: /datasets/visium-spatial-gene-expression-brain-o75ioak2kprvsagq0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE243140
- Collections: [geo-gse243140](/collections/md/5.md#geo-gse243140)
- Load: `Catalog().dataset("O75IOak2kPrVSaGQ0000").to_sdata()`


<a id="merfish-brain-nv17tq2htpwo8mwk0000"></a>
## Mouse brain

- uid: `NV17tQ2htpwO8MWK0000`
- Page: /datasets/merfish-brain-nv17tq2htpwo8mwk0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 24,456
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("NV17tQ2htpwO8MWK0000").to_sdata()`


<a id="stereo-seq-brain-92xr0pscame8padt0000"></a>
## Mouse brain

- uid: `92xR0PscaMe8pAdT0000`
- Page: /datasets/stereo-seq-brain-92xr0pscame8padt0000/
- Technology: Stereo-seq
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations: 39,532
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("92xR0PscaMe8pAdT0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-0n71xajnyc0j6y2k0000"></a>
## Human kidney

- uid: `0n71xajNyc0J6y2K0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-0n71xajnyc0j6y2k0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 6,552
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-04-15_01h17m26s
- Load: `Catalog().dataset("0n71xajNyc0J6y2K0000").to_sdata()`


<a id="merfish-brain-mlagf0wt5loaslze0000"></a>
## Mouse brain

- uid: `mLAGf0wT5lOasLZE0000`
- Page: /datasets/merfish-brain-mlagf0wt5loaslze0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 10,142
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("mLAGf0wT5lOasLZE0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-liver-zybzmnhc0tqhnt870000"></a>
## Mouse liver

- uid: `zyBZMnhc0tqHNT870000`
- Page: /datasets/maldi-mass-spectrometry-imaging-liver-zybzmnhc0tqhnt870000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: liver
- Modality: Metabolomics
- Observations: 10,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-04-14_14h44m15s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("zyBZMnhc0tqHNT870000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-yr83fmrgcggrrr5w0000"></a>
## Human skin of body

- uid: `yr83FMrgCggrRR5W0000`
- Page: /datasets/vizgen-merscope-skin-of-body-yr83fmrgcggrrr5w0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 10,783
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("yr83FMrgCggrRR5W0000").to_sdata()`


<a id="mibi-tof-breast-ac5eco96srl6i2ti0000"></a>
## Human breast

- uid: `ac5Eco96SRl6i2TI0000`
- Page: /datasets/mibi-tof-breast-ac5eco96srl6i2ti0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,100
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("ac5Eco96SRl6i2TI0000").to_sdata()`


<a id="mibi-tof-lymph-node-gmram5kxlbybmt3o0000"></a>
## Human lymph node

- uid: `gMrAm5kxlbYbmt3o0000`
- Page: /datasets/mibi-tof-lymph-node-gmram5kxlbybmt3o0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: lymph node
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 8,378
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("gMrAm5kxlbYbmt3o0000").to_sdata()`


<a id="mibi-tof-breast-y5ggozfsbccd811e0000"></a>
## Human breast

- uid: `Y5GGozfsbcCD811e0000`
- Page: /datasets/mibi-tof-breast-y5ggozfsbccd811e0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,505
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("Y5GGozfsbcCD811e0000").to_sdata()`


<a id="10x-xenium-brain-l30q7n4zorhuhybv0000"></a>
## Human brain

- uid: `l30Q7N4ZoRhuhybv0000`
- Page: /datasets/10x-xenium-brain-l30q7n4zorhuhybv0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (cells): 180,332
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260452
- Publication: https://doi.org/10.1038/s41586-026-10214-2
- Load: `Catalog().dataset("l30Q7N4ZoRhuhybv0000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-tyecd61cifmmkjhk0000"></a>
## Human middle temporal gyrus

- uid: `tYecD61CIfmMkjhK0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-tyecd61cifmmkjhk0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 45,441
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("tYecD61CIfmMkjhK0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-7xrbkefxmxuxiyn10000"></a>
## Human kidney

- uid: `7XRbkeFXmxuxiyn10000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-7xrbkefxmxuxiyn10000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 4,644
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2022-01-31_21h43m34s
- Load: `Catalog().dataset("7XRbkeFXmxuxiyn10000").to_sdata()`


<a id="vizgen-merscope-brain-a77vt9v1gwzee1bj0000"></a>
## Mouse brain

- uid: `a77vT9V1gWZEe1bj0000`
- Page: /datasets/vizgen-merscope-brain-a77vt9v1gwzee1bj0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Condition: Down syndrome
- Modality: RNA
- Observations (cells): 340,478
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280177
- Publication: https://doi.org/10.1038/s41467-025-63752-0
- Load: `Catalog().dataset("a77vT9V1gWZEe1bj0000").to_sdata()`


<a id="10x-xenium-caecum-wpwlvzfp4k7nfstt0000"></a>
## Human caecum

- uid: `wpwlVzfp4K7nFSTT0000`
- Page: /datasets/10x-xenium-caecum-wpwlvzfp4k7nfstt0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: caecum
- Condition: ulcerative colitis
- Modality: RNA
- Observations (cells): 41,098
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("wpwlVzfp4K7nFSTT0000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-fyksvhlt2p7dlzfn0000"></a>
## Human lymph node

- uid: `fykSvhLT2P7dlzfN0000`
- Page: /datasets/phenocycler-fusion-lymph-node-fyksvhlt2p7dlzfn0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Modality: protein
- Observations (cells): 16,351
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("fykSvhLT2P7dlzfN0000").to_sdata()`


<a id="mibi-tof-breast-mvfs9dcnjlp01vbj0000"></a>
## Human breast

- uid: `mVfS9dCNjLP01vbj0000`
- Page: /datasets/mibi-tof-breast-mvfs9dcnjlp01vbj0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 576
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("mVfS9dCNjLP01vbj0000").to_sdata()`