# SpatialData-DB datasets, shard 28

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-skin-of-body-3z2dntbdk4mtl45f0000"></a>
## Mouse skin of body

- uid: `3z2dNtbdK4MTL45F0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-3z2dntbdk4mtl45f0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245582
- Publication: https://doi.org/10.1158/0008-5472.CAN-24-0690
- Collections: [geo-gse245582](/collections/md/8.md#geo-gse245582)
- Load: `Catalog().dataset("3z2dNtbdK4MTL45F0000").to_sdata()`


<a id="visium-spatial-gene-expression-zone-of-skin-2uarmyqrciqja4wr0000"></a>
## Human zone of skin

- uid: `2UArMyqRCiQJA4Wr0000`
- Page: /datasets/visium-spatial-gene-expression-zone-of-skin-2uarmyqrciqja4wr0000/
- Technology: Visium
- Organism: human
- Tissue: zone of skin
- Condition: skin neoplasm
- Modality: RNA
- Observations (spots): 3,808
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE299660
- Publication: https://doi.org/10.1016/j.jid.2026.03.048
- Collections: [geo-gse299660](/collections/md/0.md#geo-gse299660)
- Load: `Catalog().dataset("2UArMyqRCiQJA4Wr0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-fqt2cwklav0qezqx0000"></a>
## Mouse spinal cord

- uid: `Fqt2CWkLAV0qEZqx0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-fqt2cwklav0qezqx0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 270
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("Fqt2CWkLAV0qEZqx0000").to_sdata()`


<a id="visium-spatial-gene-expression-breast-nbkvny9lc9htt73v0000"></a>
## Human breast

- uid: `nbKvNY9lc9hTt73V0000`
- Page: /datasets/visium-spatial-gene-expression-breast-nbkvny9lc9htt73v0000/
- Technology: Visium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (spots): 2,276
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE242311
- Publication: https://doi.org/10.3390/ijms252011109
- Collections: [geo-gse242311](/collections/md/f.md#geo-gse242311)
- Load: `Catalog().dataset("nbKvNY9lc9hTt73V0000").to_sdata()`


<a id="visium-spatial-gene-expression-oral-cavity-p7hrtoiufxzqrow90000"></a>
## Human oral cavity

- uid: `P7HrTOIuFxZQrOW90000`
- Page: /datasets/visium-spatial-gene-expression-oral-cavity-p7hrtoiufxzqrow90000/
- Technology: Visium
- Organism: human
- Tissue: oral cavity
- Condition: oral cavity squamous cell carcinoma
- Modality: RNA
- Observations (spots): 2,731
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE208253
- Publication: https://doi.org/10.1038/s41467-023-40271-4
- Collections: [geo-gse208253](/collections/md/e.md#geo-gse208253)
- Load: `Catalog().dataset("P7HrTOIuFxZQrOW90000").to_sdata()`


<a id="vizgen-merscope-brain-bzmnsgcwjobtfamc0000"></a>
## Mouse brain

- uid: `BZmNsGcWjobtFaMc0000`
- Page: /datasets/vizgen-merscope-brain-bzmnsgcwjobtfamc0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 193,744
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266688
- Publication: https://doi.org/10.1016/j.celrep.2024.115194
- Load: `Catalog().dataset("BZmNsGcWjobtFaMc0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-akagx9aij09rnvyb0000"></a>
## Mouse colon

- uid: `aKaGx9Aij09rNVyB0000`
- Page: /datasets/visium-spatial-gene-expression-colon-akagx9aij09rnvyb0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colorectal carcinoma
- Modality: RNA
- Observations (spots): 3,276
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE273489
- Publication: https://doi.org/10.1016/j.celrep.2025.115698
- Collections: [geo-gse273489](/collections/md/b.md#geo-gse273489)
- Load: `Catalog().dataset("aKaGx9Aij09rNVyB0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-9i5bn4mourx0qlxp0000"></a>
## Human basal ganglion

- uid: `9i5BN4Mourx0QLXp0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-9i5bn4mourx0qlxp0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 54,326
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("9i5BN4Mourx0QLXp0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-qzmwmnk5b9llsa6d0000"></a>
## Human basal ganglion

- uid: `qzmwMNK5b9llSA6D0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-qzmwmnk5b9llsa6d0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 57,857
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Load: `Catalog().dataset("qzmwMNK5b9llSA6D0000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-gim2qgxshv9e5d6q0000"></a>
## Human basal ganglion

- uid: `gim2QGXshV9e5d6q0000`
- Page: /datasets/vizgen-merscope-basal-ganglion-gim2qgxshv9e5d6q0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 105,485
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-h22-30-001-bg](/collections/md/b.md#abc-hmba-merscope-h22-30-001-bg)
- Load: `Catalog().dataset("gim2QGXshV9e5d6q0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-irklqu3dkykmmhvo0000"></a>
## Mouse brain

- uid: `IrKLQu3dkYKmmHVo0000`
- Page: /datasets/visium-spatial-gene-expression-brain-irklqu3dkykmmhvo0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: traumatic brain injury
- Modality: RNA
- Observations (spots): 2,999
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313407
- Publication: https://doi.org/10.1177/08977151251390528
- Collections: [geo-gse313407](/collections/md/3.md#geo-gse313407)
- Load: `Catalog().dataset("IrKLQu3dkYKmmHVo0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-l6ltkbrwvt5y5qkm0000"></a>
## Human skin of body

- uid: `L6LtkBrwVt5Y5qkm0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-l6ltkbrwvt5y5qkm0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: peripheral T-cell lymphoma, not otherwise specified
- Modality: RNA
- Observations (spots): 793
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283145
- Collections: [geo-gse283145](/collections/md/b.md#geo-gse283145)
- Load: `Catalog().dataset("L6LtkBrwVt5Y5qkm0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-lf2rk5pzktkxiwoa0000"></a>
## Mouse liver

- uid: `LF2rK5pzKTKxIWOa0000`
- Page: /datasets/visium-spatial-gene-expression-liver-lf2rk5pzktkxiwoa0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: metabolic dysfunction-associated steatohepatitis
- Modality: RNA
- Observations (spots): 2,165
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE248077
- Collections: [geo-gse248077](/collections/md/f.md#geo-gse248077)
- Load: `Catalog().dataset("LF2rK5pzKTKxIWOa0000").to_sdata()`


<a id="10x-xenium-spleen-dthwgsua9id0rsom0000"></a>
## Human spleen

- uid: `dtHwgSUA9iD0rSOm0000`
- Page: /datasets/10x-xenium-spleen-dthwgsua9id0rsom0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: spleen
- Modality: RNA
- Observations (cells): 329,371
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326743
- Load: `Catalog().dataset("dtHwgSUA9iD0rSOm0000").to_sdata()`


<a id="visium-spatial-gene-expression-temporal-cortex-os3uzbbb42tcipfy0000"></a>
## Human temporal cortex

- uid: `OS3UzbbB42TCIpfY0000`
- Page: /datasets/visium-spatial-gene-expression-temporal-cortex-os3uzbbb42tcipfy0000/
- Technology: Visium
- Organism: human
- Tissue: temporal cortex
- Condition: Lewy body dementia
- Modality: RNA
- Observations (spots): 13,770
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293896
- Publication: https://doi.org/10.1007/s00401-026-02981-z
- Collections: [geo-gse293896](/collections/md/f.md#geo-gse293896)
- Load: `Catalog().dataset("OS3UzbbB42TCIpfY0000").to_sdata()`


<a id="visium-spatial-gene-expression-placenta-an7k5nzdiopcrf7t0000"></a>
## Pig placenta

- uid: `An7K5NZdIOpcRf7t0000`
- Page: /datasets/visium-spatial-gene-expression-placenta-an7k5nzdiopcrf7t0000/
- Technology: Visium
- Organism: pig
- Tissue: placenta
- Modality: RNA
- Observations (spots): 3,003
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8980981
- Collections: [geo-gse296975](/collections/md/4.md#geo-gse296975)
- Load: `Catalog().dataset("An7K5NZdIOpcRf7t0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-0e1pbmeyeiio3rtf0000"></a>
## Human brain

- uid: `0E1PBMEYeiiO3rTF0000`
- Page: /datasets/visium-spatial-gene-expression-brain-0e1pbmeyeiio3rtf0000/
- Technology: Visium
- Organism: human
- Tissue: brain
- Condition: metastatic malignant neoplasm
- Modality: RNA
- Observations (spots): 996
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325196
- Collections: [geo-gse325196](/collections/md/2.md#geo-gse325196)
- Load: `Catalog().dataset("0E1PBMEYeiiO3rTF0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-a3ojmdptqifykvu40000"></a>
## Human dorsolateral prefrontal cortex

- uid: `a3ojmDPtqIfYKvu40000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-a3ojmdptqifykvu40000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: schizophrenia
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307403
- Collections: [geo-gse307403](/collections/md/0.md#geo-gse307403)
- Load: `Catalog().dataset("a3ojmDPtqIfYKvu40000").to_sdata()`


<a id="vizgen-merscope-basal-ganglion-fu7wmhy1n5mqb8m20000"></a>
## Macaque basal ganglion

- uid: `Fu7wMHY1n5mQB8m20000`
- Page: /datasets/vizgen-merscope-basal-ganglion-fu7wmhy1n5mqb8m20000/
- Technology: Vizgen MERSCOPE
- Organism: macaque
- Tissue: basal ganglion
- Modality: RNA
- Observations (cells): 41,909
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/HMBA-Spatial-BG.html
- Publication: https://doi.org/10.1101/2025.11.22.688128
- Collections: [abc-hmba-merscope-qm23-50-001-bg](/collections/md/d.md#abc-hmba-merscope-qm23-50-001-bg)
- Load: `Catalog().dataset("Fu7wMHY1n5mQB8m20000").to_sdata()`


<a id="vizgen-merscope-brain-ernyz25mgmkhacvi0000"></a>
## Mouse brain

- uid: `erNYZ25MGMkhAcVI0000`
- Page: /datasets/vizgen-merscope-brain-ernyz25mgmkhacvi0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 71,203
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/MERFISH-C57BL6J-638850.html
- Publication: https://doi.org/10.1038/s41586-023-06812-z
- Collections: [abc-merfish-c57bl6j-638850](/collections/md/e.md#abc-merfish-c57bl6j-638850)
- Load: `Catalog().dataset("erNYZ25MGMkhAcVI0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-brain-gxkih5bscjsgnn6y0000"></a>
## Mouse brain

- uid: `GxkIH5bSCjsGnn6Y0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-brain-gxkih5bscjsgnn6y0000/
- Technology: MALDI mass spectrometry imaging
- Organism: mouse
- Tissue: brain
- Condition: cancer
- Modality: Metabolomics
- Observations: 650,000
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-09-27_11h35m20s
- Publication: https://doi.org/10.1038/s42255-024-01118-4
- Load: `Catalog().dataset("GxkIH5bSCjsGnn6Y0000").to_sdata()`


<a id="stereo-seq-prefrontal-cortex-nkabdtdf8hrfakxf0000"></a>
## Human prefrontal cortex

- uid: `nKABDTDF8hRfAkXf0000`
- Page: /datasets/stereo-seq-prefrontal-cortex-nkabdtdf8hrfakxf0000/
- Technology: Stereo-seq
- Organism: human
- Tissue: prefrontal cortex
- Condition: Alzheimer disease
- Modality: RNA
- Observations: 93,793
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269906
- Collections: [geo-gse269906](/collections/md/5.md#geo-gse269906)
- Load: `Catalog().dataset("nKABDTDF8hRfAkXf0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-47iumrfxpfgcfmnv0000"></a>
## Human kidney

- uid: `47IUmrfXpfGcfmnv0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-47iumrfxpfgcfmnv0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 7,035
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-04-07_20h19m14s
- Load: `Catalog().dataset("47IUmrfXpfGcfmnv0000").to_sdata()`


<a id="mibi-tof-breast-rqeyfdiabjit4mur0000"></a>
## Human breast

- uid: `RQEYFDIAbjIT4MUR0000`
- Page: /datasets/mibi-tof-breast-rqeyfdiabjit4mur0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 5,978
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("RQEYFDIAbjIT4MUR0000").to_sdata()`


<a id="10x-xenium-subcutaneous-adipose-tissue-kr0whc5a9hnhgkkm0000"></a>
## Human subcutaneous adipose tissue

- uid: `kR0wHC5A9hnHGKkM0000`
- Page: /datasets/10x-xenium-subcutaneous-adipose-tissue-kr0whc5a9hnhgkkm0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: subcutaneous adipose tissue
- Modality: RNA
- Observations (cells): 6,059
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE295862
- Publication: https://doi.org/10.1038/s41586-025-09233-2
- Load: `Catalog().dataset("kR0wHC5A9hnHGKkM0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-e4coypk4wyrkttwr0000"></a>
## Human skin of body

- uid: `E4CoypK4WyrKttwr0000`
- Page: /datasets/vizgen-merscope-skin-of-body-e4coypk4wyrkttwr0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,657
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("E4CoypK4WyrKttwr0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-y6fcbd7gqspvghyh0000"></a>
## Human skin of body

- uid: `y6FCBD7gQsPVghYH0000`
- Page: /datasets/vizgen-merscope-skin-of-body-y6fcbd7gqspvghyh0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 27,694
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("y6FCBD7gQsPVghYH0000").to_sdata()`


<a id="10x-xenium-brain-gxozj3afc4i3dhjw0000"></a>
## Human brain

- uid: `GxOZJ3afC4I3DhJW0000`
- Page: /datasets/10x-xenium-brain-gxozj3afc4i3dhjw0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (cells): 57,730
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260452
- Publication: https://doi.org/10.1038/s41586-026-10214-2
- Load: `Catalog().dataset("GxOZJ3afC4I3DhJW0000").to_sdata()`