# SpatialData-DB datasets, shard 26

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-colon-nmiizupnexadlrli0000"></a>
## Mouse colon

- uid: `nmIIZUPNeXADLRlI0000`
- Page: /datasets/visium-spatial-gene-expression-colon-nmiizupnexadlrli0000/
- Technology: Visium
- Organism: mouse
- Tissue: colon
- Condition: colitis
- Modality: RNA
- Observations (spots): 3,483
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334067
- Publication: https://doi.org/10.1038/s41588-026-02673-0
- Collections: [geo-gse334067](/collections/md/b.md#geo-gse334067)
- Load: `Catalog().dataset("nmIIZUPNeXADLRlI0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-i3bgo9jpeac24vg80000"></a>
## Mouse lung

- uid: `I3BgO9JpeAc24vG80000`
- Page: /datasets/visium-spatial-gene-expression-lung-i3bgo9jpeac24vg80000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Modality: RNA
- Observations (spots): 1,676
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("I3BgO9JpeAc24vG80000").to_sdata()`


<a id="spatial-transcriptomics-skin-of-body-wn4nrjekj3fmu2fa0000"></a>
## Human skin of body

- uid: `WN4NrJekJ3Fmu2FA0000`
- Page: /datasets/spatial-transcriptomics-skin-of-body-wn4nrjekj3fmu2fa0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: skin of body
- Condition: skin squamous cell carcinoma
- Modality: RNA
- Observations (spots): 1,182
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7391009/
- Publication: https://doi.org/10.1016/j.cell.2020.05.039
- Collections: [doi-10-1016-j-cell-2020-05-039](/collections/md/0.md#doi-10-1016-j-cell-2020-05-039)
- Load: `Catalog().dataset("WN4NrJekJ3Fmu2FA0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-qbsryh5ulof6jlxy0000"></a>
## Mouse skin of body

- uid: `QBSrYh5ulOf6jlXy0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-qbsryh5ulof6jlxy0000/
- Technology: Visium
- Organism: mouse
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (spots): 932
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.biorxiv.org/content/10.1101/2023.07.27.550727v1
- Publication: https://doi.org/10.1101/2023.07.27.550727
- Load: `Catalog().dataset("QBSrYh5ulOf6jlXy0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-qxfguutdrwurnpgr0000"></a>
## Mouse brain

- uid: `QXfgUUTDRWUrNPgR0000`
- Page: /datasets/visium-spatial-gene-expression-brain-qxfguutdrwurnpgr0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,573
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/37591239/
- Publication: https://doi.org/10.1016/j.cell.2023.07.027
- Collections: [doi-10-1016-j-cell-2023-07-027](/collections/md/e.md#doi-10-1016-j-cell-2023-07-027)
- Load: `Catalog().dataset("QXfgUUTDRWUrNPgR0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-ecrd3y4yjahr2u8c0000"></a>
## Human lung

- uid: `eCrD3Y4YJAHr2U8c0000`
- Page: /datasets/visium-spatial-gene-expression-lung-ecrd3y4yjahr2u8c0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 2,729
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41588-022-01243-4
- Publication: https://doi.org/10.1038/s41588-022-01243-4
- Collections: [doi-10-1038-s41588-022-01243-4](/collections/md/9.md#doi-10-1038-s41588-022-01243-4)
- Load: `Catalog().dataset("eCrD3Y4YJAHr2U8c0000").to_sdata()`


<a id="visium-spatial-gene-expression-uterine-cervix-qlx8f7kk5fhqos7p0000"></a>
## Human uterine cervix

- uid: `QLX8F7Kk5Fhqos7p0000`
- Page: /datasets/visium-spatial-gene-expression-uterine-cervix-qlx8f7kk5fhqos7p0000/
- Technology: Visium
- Organism: human
- Tissue: uterine cervix
- Condition: cervical intraepithelial neoplasia grade 2/3
- Modality: RNA
- Observations (spots): 579
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10040725/
- Publication: https://doi.org/10.1002/ctm2.1219
- Collections: [doi-10-1002-ctm2-1219](/collections/md/9.md#doi-10-1002-ctm2-1219)
- Load: `Catalog().dataset("QLX8F7Kk5Fhqos7p0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-t7pjoqr9rbgzz9qu0000"></a>
## Mouse intestine

- uid: `t7pjOQR9rBgZZ9qu0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-t7pjoqr9rbgzz9qu0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Condition: ulcerative colitis
- Modality: RNA
- Observations (spots): 3,934
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source:                                             
- Collections: [hest-10x-visium-spatial-transcriptomics-of-murine-colon-at-d14-mucosa-healing-in-b-cell-sufficient-deficient-mice](/collections/md/d.md#hest-10x-visium-spatial-transcriptomics-of-murine-colon-at-d14-mucosa-healing-in-b-cell-sufficient-deficient-mice)
- Load: `Catalog().dataset("t7pjOQR9rBgZZ9qu0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-dzkugmarkvo2ha4v0000"></a>
## Human prostate gland

- uid: `DzKUGMARKVO2ha4v0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-dzkugmarkvo2ha4v0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate cancer
- Modality: RNA
- Observations (spots): 4,401
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE278936
- Publication: https://doi.org/10.1038/s41467-024-54364-1
- Collections: [geo-gse278936](/collections/md/1.md#geo-gse278936)
- Load: `Catalog().dataset("DzKUGMARKVO2ha4v0000").to_sdata()`


<a id="visium-spatial-gene-expression-hippocampal-formation-cduw1sqemn47oq1r0000"></a>
## Human hippocampal formation

- uid: `CDuW1sQeMn47oQ1r0000`
- Page: /datasets/visium-spatial-gene-expression-hippocampal-formation-cduw1sqemn47oq1r0000/
- Technology: Visium
- Organism: human
- Tissue: hippocampal formation
- Condition: Alzheimer disease
- Modality: RNA
- Observations (spots): 10,764
- Licence: CC BY 4.0
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE263079
- Publication: https://doi.org/10.1038/s41591-025-03574-1
- Collections: [geo-gse263079](/collections/md/2.md#geo-gse263079)
- Load: `Catalog().dataset("CDuW1sQeMn47oQ1r0000").to_sdata()`


<a id="mibi-tof-breast-nxrdszykogtzrgls0000"></a>
## Human breast

- uid: `nxRDsZyKOGTzrGLs0000`
- Page: /datasets/mibi-tof-breast-nxrdszykogtzrgls0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,746
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("nxRDsZyKOGTzrGLs0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-yneuh3rgtcmlnsha0000"></a>
## Human ovary

- uid: `yNeuh3RGTCMlNshA0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-yneuh3rgtcmlnsha0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 1,490
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327312
- Collections: [geo-gse327312](/collections/md/b.md#geo-gse327312)
- Load: `Catalog().dataset("yNeuh3RGTCMlNshA0000").to_sdata()`


<a id="visium-spatial-gene-expression-amygdala-tl8zwncrys4tit8g0000"></a>
## Human amygdala

- uid: `tL8zwNcrYs4TIt8G0000`
- Page: /datasets/visium-spatial-gene-expression-amygdala-tl8zwncrys4tit8g0000/
- Technology: Visium
- Organism: human
- Tissue: amygdala
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342709
- Collections: [geo-gse342709](/collections/md/a.md#geo-gse342709)
- Load: `Catalog().dataset("tL8zwNcrYs4TIt8G0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-rezhakupis1r1jwu0002"></a>
## Mouse spinal cord

- uid: `rEzHAkUpIs1R1jWu0002`
- Page: /datasets/spatial-transcriptomics-spinal-cord-rezhakupis1r1jwu0002/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 215
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("rEzHAkUpIs1R1jWu0002").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-g2nud5mvrzkfvawj0000"></a>
## Human ovary

- uid: `G2NUD5MVRzKFVAwJ0000`
- Page: /datasets/visium-spatial-gene-expression-ovary-g2nud5mvrzkfvawj0000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 1,534
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274657
- Publication: https://doi.org/10.1038/s42003-025-08771-9
- Collections: [geo-gse274657](/collections/md/5.md#geo-gse274657)
- Load: `Catalog().dataset("G2NUD5MVRzKFVAwJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-hippocampal-formation-magqtcjouyfr3oc00000"></a>
## Human hippocampal formation

- uid: `MagQtcJOUyFR3Oc00000`
- Page: /datasets/visium-spatial-gene-expression-hippocampal-formation-magqtcjouyfr3oc00000/
- Technology: Visium
- Organism: human
- Tissue: hippocampal formation
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE264692
- Collections: [geo-gse264692](/collections/md/2.md#geo-gse264692)
- Load: `Catalog().dataset("MagQtcJOUyFR3Oc00000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-yo0a16nhkv1mtsm20000"></a>
## Human dorsolateral prefrontal cortex

- uid: `Yo0A16NhKv1mTsm20000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-yo0a16nhkv1mtsm20000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("Yo0A16NhKv1mTsm20000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-bh45t7okrojqh9es0000"></a>
## Mouse liver

- uid: `Bh45t7oKRoJQH9eS0000`
- Page: /datasets/visium-spatial-gene-expression-liver-bh45t7okrojqh9es0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: drug-induced liver injury
- Modality: RNA
- Observations (spots): 1,585
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE272564
- Collections: [geo-gse272564](/collections/md/6.md#geo-gse272564)
- Load: `Catalog().dataset("Bh45t7oKRoJQH9eS0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-g89shel9fl2zfdjk0000"></a>
## Human lung

- uid: `g89SHEl9Fl2zFdjk0000`
- Page: /datasets/visium-spatial-gene-expression-lung-g89shel9fl2zfdjk0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 2,204
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE271370
- Collections: [geo-gse271370](/collections/md/5.md#geo-gse271370)
- Load: `Catalog().dataset("g89SHEl9Fl2zFdjk0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-dnozm8pvx26dhvqp0000"></a>
## Human pancreas

- uid: `DnoZM8pVx26DHVQP0000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-dnozm8pvx26dhvqp0000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,753
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452847
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("DnoZM8pVx26DHVQP0000").to_sdata()`


<a id="10x-xenium-oropharynx-zvyldoqknfndcrpf0000"></a>
## Human oropharynx

- uid: `ZVYLDOqknFndCRpf0000`
- Page: /datasets/10x-xenium-oropharynx-zvyldoqknfndcrpf0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: oropharynx
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (cells): 8,552
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE324934
- Publication: https://doi.org/10.1186/s12916-026-04883-z
- Load: `Catalog().dataset("ZVYLDOqknFndCRpf0000").to_sdata()`


<a id="mibi-tof-breast-e5waxuljgtcktt0d0000"></a>
## Human breast

- uid: `e5WaxuljGtCkTt0D0000`
- Page: /datasets/mibi-tof-breast-e5waxuljgtcktt0d0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,449
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("e5WaxuljGtCkTt0D0000").to_sdata()`


<a id="visium-spatial-gene-expression-gastrocnemius-zeqbktkbjofr5mys0000"></a>
## Mouse gastrocnemius

- uid: `ZeqBktkBJoFr5MyS0000`
- Page: /datasets/visium-spatial-gene-expression-gastrocnemius-zeqbktkbjofr5mys0000/
- Technology: Visium
- Organism: mouse
- Tissue: gastrocnemius
- Condition: Duchenne muscular dystrophy
- Modality: RNA
- Observations (spots): 856
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM6996261
- Collections: [geo-gse223813](/collections/md/b.md#geo-gse223813)
- Load: `Catalog().dataset("ZeqBktkBJoFr5MyS0000").to_sdata()`


<a id="10x-xenium-colon-iidmpcbvlfuswrbp0001"></a>
## Human colon

- uid: `iidMPcbVlfusWRbP0001`
- Page: /datasets/10x-xenium-colon-iidmpcbvlfuswrbp0001/
- Technology: 10x Xenium
- Organism: human
- Tissue: colon
- Condition: colorectal cancer
- Modality: RNA
- Observations (cells): 388,175
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/ffpe-human-colorectal-cancer-data-with-human-immuno-oncology-profiling-panel-and-custom-add-on-1-standard
- Load: `Catalog().dataset("iidMPcbVlfusWRbP0001").to_sdata()`


<a id="vizgen-merscope-tonsil-xaqr1sotmfzkyo0g0000"></a>
## Human tonsil

- uid: `xaQR1SoTMfZkYo0g0000`
- Page: /datasets/vizgen-merscope-tonsil-xaqr1sotmfzkyo0g0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: tonsil
- Modality: RNA
- Observations (cells): 1,099,313
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282714
- Publication: https://doi.org/10.1016/j.cels.2025.101235
- Load: `Catalog().dataset("xaQR1SoTMfZkYo0g0000").to_sdata()`


<a id="mibi-tof-breast-wwwrqbkm227sa4te0000"></a>
## Human breast

- uid: `wwwRQbKM227SA4TE0000`
- Page: /datasets/mibi-tof-breast-wwwrqbkm227sa4te0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 3,885
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("wwwRQbKM227SA4TE0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-gufukwysvrjqtnf10000"></a>
## Human kidney

- uid: `gufukWYSVRJqtNF10000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-gufukwysvrjqtnf10000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 1,872
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2023-08-01_01h36m04s
- Load: `Catalog().dataset("gufukWYSVRJqtNF10000").to_sdata()`


<a id="10x-xenium-ovary-ex8cqhfw9sbcvv7m0000"></a>
## Human ovary

- uid: `Ex8cQhFw9SbcVV7M0000`
- Page: /datasets/10x-xenium-ovary-ex8cqhfw9sbcvv7m0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (cells): 110,570
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320142
- Publication: https://doi.org/10.1038/s41467-026-72036-0
- Load: `Catalog().dataset("Ex8cQhFw9SbcVV7M0000").to_sdata()`


<a id="vizgen-merscope-brain-wxucafvrl7kxwzeo0000"></a>
## Mouse brain

- uid: `wXUCAFVrL7kxwZeo0000`
- Page: /datasets/vizgen-merscope-brain-wxucafvrl7kxwzeo0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 392,559
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE269617
- Load: `Catalog().dataset("wXUCAFVrL7kxwZeo0000").to_sdata()`


<a id="10x-xenium-brain-lxqdk4cmt1wbg4cy0000"></a>
## Mouse brain

- uid: `LxQdk4cMT1wbG4CY0000`
- Page: /datasets/10x-xenium-brain-lxqdk4cmt1wbg4cy0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 116,070
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE337270
- Load: `Catalog().dataset("LxQdk4cMT1wbG4CY0000").to_sdata()`