# SpatialData-DB datasets, shard 20

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="10x-xenium-breast-lidqctn6dzjtuvts0000"></a>
## Human breast

- uid: `lIdqctN6dzjTuvts0000`
- Page: /datasets/10x-xenium-breast-lidqctn6dzjtuvts0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (cells): 356,746
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/ffpe-human-breast-with-pre-designed-panel-1-standard
- Load: `Catalog().dataset("lIdqctN6dzjTuvts0000").to_sdata()`


<a id="visium-spatial-gene-expression-colon-bijymvesa5exnva50000"></a>
## Rat colon

- uid: `BIJYmveSa5eXNVA50000`
- Page: /datasets/visium-spatial-gene-expression-colon-bijymvesa5exnva50000/
- Technology: Visium
- Organism: rat
- Tissue: colon
- Condition: adenocarcinoma
- Modality: RNA
- Observations (spots): 1,372
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE211895
- Publication: https://doi.org/10.1016/j.crmeth.2022.100340
- Collections: [geo-gse211895](/collections/md/d.md#geo-gse211895)
- Load: `Catalog().dataset("BIJYmveSa5eXNVA50000").to_sdata()`


<a id="visium-spatial-gene-expression-urinary-bladder-qjcnzcc0wdtdukzf0000"></a>
## Human urinary bladder

- uid: `qJCnZCc0wDTduKzF0000`
- Page: /datasets/visium-spatial-gene-expression-urinary-bladder-qjcnzcc0wdtdukzf0000/
- Technology: Visium
- Organism: human
- Tissue: urinary bladder
- Condition: bladder transitional cell carcinoma
- Modality: RNA
- Observations (spots): 1,432
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.sciencedirect.com/science/article/pii/S2211124724004698?via%3Dihub#app2
- Publication: https://doi.org/10.1016/j.celrep.2024.114141
- Collections: [doi-10-1016-j-celrep-2024-114141](/collections/md/3.md#doi-10-1016-j-celrep-2024-114141)
- Load: `Catalog().dataset("qJCnZCc0wDTduKzF0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-cspbyce4r0a0ffdo0000"></a>
## Human intestine

- uid: `cSpbYCe4r0A0fFDO0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-cspbyce4r0a0ffdo0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Modality: RNA
- Observations (spots): 3,291
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/34845373/
- Publication: https://doi.org/10.1038/s41587-021-01075-3
- Collections: [doi-10-1038-s41587-021-01075-3](/collections/md/a.md#doi-10-1038-s41587-021-01075-3)
- Load: `Catalog().dataset("cSpbYCe4r0A0fFDO0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-flnv2snjfpvti2p90000"></a>
## Human liver

- uid: `FLnv2snJFpVti2P90000`
- Page: /datasets/visium-spatial-gene-expression-liver-flnv2snjfpvti2p90000/
- Technology: Visium
- Organism: human
- Tissue: liver
- Condition: hepatocellular carcinoma
- Modality: RNA
- Observations (spots): 2,261
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.biorxiv.org/content/10.1101/2022.11.09.515839v1.full
- Publication: https://doi.org/10.1101/2022.11.09.515839
- Collections: [doi-10-1101-2022-11-09-515839](/collections/md/2.md#doi-10-1101-2022-11-09-515839)
- Load: `Catalog().dataset("FLnv2snJFpVti2P90000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-fmuvnulioayjtdpv0000"></a>
## Human intestine

- uid: `fMUVnULioayjtDpv0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-fmuvnulioayjtdpv0000/
- Technology: Visium
- Organism: human
- Tissue: intestine
- Condition: colorectal adenoma
- Modality: RNA
- Observations (spots): 818
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.cell.com/cell/fulltext/S0092-8674(23)01222-9?_returnURL=https%3A%2F%2Flinkinghub.elsevier.com%2Fretrieve%2Fpii%2FS0092867423012229%3Fshowall%3Dtrue#secsectitle0020
- Publication: https://doi.org/10.1016/j.cell.2023.11.006
- Collections: [doi-10-1016-j-cell-2023-11-006](/collections/md/1.md#doi-10-1016-j-cell-2023-11-006)
- Load: `Catalog().dataset("fMUVnULioayjtDpv0000").to_sdata()`


<a id="visium-spatial-gene-expression-skeletal-muscle-tissue-2so1ap03ti6w1lj10000"></a>
## Mouse skeletal muscle tissue

- uid: `2So1AP03tI6W1LJ10000`
- Page: /datasets/visium-spatial-gene-expression-skeletal-muscle-tissue-2so1ap03ti6w1lj10000/
- Technology: Visium
- Organism: mouse
- Tissue: skeletal muscle tissue
- Modality: RNA
- Observations (spots): 1,011
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8589952/
- Publication: https://doi.org/10.1038/s42003-021-02810-x
- Collections: [doi-10-1038-s42003-021-02810-x](/collections/md/8.md#doi-10-1038-s42003-021-02810-x)
- Load: `Catalog().dataset("2So1AP03tI6W1LJ10000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-mqfjgohe4o2jofme0000"></a>
## Mouse lung

- uid: `MqfJGOHE4O2JofMe0000`
- Page: /datasets/visium-spatial-gene-expression-lung-mqfjgohe4o2jofme0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: lung adenocarcinoma
- Modality: RNA
- Observations (spots): 1,244
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE193460
- Publication: https://doi.org/10.1016/j.cell.2022.02.015
- Collections: [geo-gse193460](/collections/md/0.md#geo-gse193460)
- Load: `Catalog().dataset("MqfJGOHE4O2JofMe0000").to_sdata()`


<a id="visium-spatial-gene-expression-quadriceps-femoris-f5rebb5o0uawuq2o0000"></a>
## Mouse quadriceps femoris

- uid: `F5rebB5o0UAwUq2o0000`
- Page: /datasets/visium-spatial-gene-expression-quadriceps-femoris-f5rebb5o0uawuq2o0000/
- Technology: Visium
- Organism: mouse
- Tissue: quadriceps femoris
- Condition: Duchenne muscular dystrophy
- Modality: RNA
- Observations (spots): 1,884
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE199659
- Publication: https://doi.org/10.1038/s41467-023-40555-9
- Collections: [geo-gse199659](/collections/md/0.md#geo-gse199659)
- Load: `Catalog().dataset("F5rebB5o0UAwUq2o0000").to_sdata()`


<a id="visium-spatial-gene-expression-anterior-cingulate-cortex-j7aadyuy2cfppnil0000"></a>
## Human anterior cingulate cortex

- uid: `j7aadyuy2cFPpnIl0000`
- Page: /datasets/visium-spatial-gene-expression-anterior-cingulate-cortex-j7aadyuy2cfppnil0000/
- Technology: Visium
- Organism: human
- Tissue: anterior cingulate cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE296789
- Publication: https://doi.org/10.1016/j.celrep.2026.117500
- Collections: [geo-gse296789](/collections/md/0.md#geo-gse296789)
- Load: `Catalog().dataset("j7aadyuy2cFPpnIl0000").to_sdata()`


<a id="10x-xenium-bone-marrow-7i3advcrwb2pkhdj0000"></a>
## Mouse bone marrow

- uid: `7I3adVcRwB2pKHDJ0000`
- Page: /datasets/10x-xenium-bone-marrow-7i3advcrwb2pkhdj0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: bone marrow
- Modality: RNA
- Observations (cells): 143,810
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8945654
- Publication: https://doi.org/10.1038/s41588-026-02671-2
- Collections: [geo-gse271693](/collections/md/1.md#geo-gse271693)
- Load: `Catalog().dataset("7I3adVcRwB2pKHDJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-liver-vqsktoponk35txux0000"></a>
## Mouse liver

- uid: `VQsKtoponk35tXUX0000`
- Page: /datasets/visium-spatial-gene-expression-liver-vqsktoponk35txux0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Modality: RNA
- Observations (spots): 2,760
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326636
- Collections: [geo-gse326636](/collections/md/6.md#geo-gse326636)
- Load: `Catalog().dataset("VQsKtoponk35tXUX0000").to_sdata()`


<a id="visium-spatial-gene-expression-skin-of-body-dlr5ilytfg2oogbz0000"></a>
## Human skin of body

- uid: `dLr5ilYTFG2OOgbZ0000`
- Page: /datasets/visium-spatial-gene-expression-skin-of-body-dlr5ilytfg2oogbz0000/
- Technology: Visium
- Organism: human
- Tissue: skin of body
- Condition: acute myeloid leukemia
- Modality: RNA
- Observations (spots): 3,397
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8576302
- Collections: [geo-gse279576](/collections/md/c.md#geo-gse279576)
- Load: `Catalog().dataset("dLr5ilYTFG2OOgbZ0000").to_sdata()`


<a id="phenocycler-pancreas-6qkrncqlrupxgnmx0000"></a>
## Human pancreas

- uid: `6qkrnCQLRUpXgNMx0000`
- Page: /datasets/phenocycler-pancreas-6qkrncqlrupxgnmx0000/
- Technology: PhenoCycler
- Organism: human
- Tissue: pancreas
- Modality: protein
- Observations (cells): 269,257
- Licence: CC BY 4.0
- Source: https://doi.org/10.5281/zenodo.7742474
- Collections: [zenodo-7742474](/collections/md/4.md#zenodo-7742474)
- Load: `Catalog().dataset("6qkrnCQLRUpXgNMx0000").to_sdata()`


<a id="10x-xenium-ascending-aorta-btprgq5qw25ikqja0000"></a>
## Human ascending aorta

- uid: `bTPRgq5QW25ikQjA0000`
- Page: /datasets/10x-xenium-ascending-aorta-btprgq5qw25ikqja0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: ascending aorta
- Condition: temporal arteritis
- Modality: RNA
- Observations (cells): 45,053
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306150
- Publication: https://doi.org/10.1172/jci.insight.200255
- Collections: [geo-gse306150](/collections/md/6.md#geo-gse306150)
- Load: `Catalog().dataset("bTPRgq5QW25ikQjA0000").to_sdata()`


<a id="visium-spatial-gene-expression-pancreas-4qd8sm36sdxkkxn10000"></a>
## Human pancreas

- uid: `4qD8sm36sDxKkxn10000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-4qd8sm36sdxkkxn10000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 3,155
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8452856
- Collections: [geo-gse274557](/collections/md/1.md#geo-gse274557)
- Load: `Catalog().dataset("4qD8sm36sDxKkxn10000").to_sdata()`


<a id="10x-xenium-tongue-ttl4kkp6udvipli70000"></a>
## Mouse tongue

- uid: `TTL4KkP6uDvIplI70000`
- Page: /datasets/10x-xenium-tongue-ttl4kkp6udvipli70000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: tongue
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (cells): 50,212
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302128
- Publication: https://doi.org/10.1038/s41416-025-03189-w
- Load: `Catalog().dataset("TTL4KkP6uDvIplI70000").to_sdata()`


<a id="merfish-brain-epz9skgbrid7iv6c0000"></a>
## Mouse brain

- uid: `Epz9SkGBrID7iv6C0000`
- Page: /datasets/merfish-brain-epz9skgbrid7iv6c0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 21,026
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("Epz9SkGBrID7iv6C0000").to_sdata()`


<a id="mibi-tof-breast-8xodpey4ambagtbb0000"></a>
## Human breast

- uid: `8XOdpeY4AMbAgTbb0000`
- Page: /datasets/mibi-tof-breast-8xodpey4ambagtbb0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,316
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("8XOdpeY4AMbAgTbb0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-udqmaq6srzdpydd60000"></a>
## Human kidney

- uid: `udQMaQ6sRZDPYDD60000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-udqmaq6srzdpydd60000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 9,408
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2020-12-09_02h40m03s
- Load: `Catalog().dataset("udQMaQ6sRZDPYDD60000").to_sdata()`


<a id="10x-xenium-bone-marrow-0kunyxsihuh5gdtf0000"></a>
## Human bone marrow

- uid: `0kunYxsihuh5gDtf0000`
- Page: /datasets/10x-xenium-bone-marrow-0kunyxsihuh5gdtf0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: bone marrow
- Condition: plasma cell myeloma
- Modality: RNA
- Observations (cells): 12,848
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288340
- Load: `Catalog().dataset("0kunYxsihuh5gDtf0000").to_sdata()`


<a id="mibi-tof-breast-gtivafvyywycagmh0000"></a>
## Human breast

- uid: `GtIvafvYYWYcAgmH0000`
- Page: /datasets/mibi-tof-breast-gtivafvyywycagmh0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 4,951
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("GtIvafvYYWYcAgmH0000").to_sdata()`


<a id="mibi-tof-breast-a9jhc0noyg0xua4s0000"></a>
## Human breast

- uid: `A9JhC0NOYg0XUA4s0000`
- Page: /datasets/mibi-tof-breast-a9jhc0noyg0xua4s0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,054
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("A9JhC0NOYg0XUA4s0000").to_sdata()`


<a id="mibi-tof-brain-pffh6ea9pzvqsncx0000"></a>
## Human brain

- uid: `pFfh6eA9pZvQsNcx0000`
- Page: /datasets/mibi-tof-brain-pffh6ea9pzvqsncx0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: brain
- Condition: glioma
- Modality: protein
- Observations: 9,434
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1579
- Collections: [bia-s-biad1579](/collections/md/2.md#bia-s-biad1579)
- Load: `Catalog().dataset("pFfh6eA9pZvQsNcx0000").to_sdata()`


<a id="10x-xenium-kidney-oe8qcqiouo91mkct0000"></a>
## Human kidney

- uid: `Oe8QcqIOUO91Mkct0000`
- Page: /datasets/10x-xenium-kidney-oe8qcqiouo91mkct0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Condition: acute tubulointerstitial nephritis
- Modality: RNA
- Observations (cells): 98,714
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE336890
- Load: `Catalog().dataset("Oe8QcqIOUO91Mkct0000").to_sdata()`


<a id="10x-xenium-breast-jebpnggwr7hoo4ef0000"></a>
## Human breast

- uid: `JebpNGGWR7Hoo4ef0000`
- Page: /datasets/10x-xenium-breast-jebpnggwr7hoo4ef0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (cells): 16,617
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311609
- Publication: https://doi.org/10.1038/s41592-026-03089-8
- Load: `Catalog().dataset("JebpNGGWR7Hoo4ef0000").to_sdata()`


<a id="mibi-tof-liver-l0sgualzxycslqx20000"></a>
## Human liver

- uid: `L0SGuALzXycsLQx20000`
- Page: /datasets/mibi-tof-liver-l0sgualzxycslqx20000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: liver
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,497
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("L0SGuALzXycsLQx20000").to_sdata()`


<a id="10x-xenium-dorsolateral-prefrontal-cortex-74uxdfqpcj4p0emw0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `74uXDFQpcj4p0eMw0000`
- Page: /datasets/10x-xenium-dorsolateral-prefrontal-cortex-74uxdfqpcj4p0emw0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (cells): 61,222
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307404
- Load: `Catalog().dataset("74uXDFQpcj4p0eMw0000").to_sdata()`


<a id="10x-xenium-ileum-thgbuzuivafhmj4p0000"></a>
## Human ileum

- uid: `tHgBuzuIVAFhmj4P0000`
- Page: /datasets/10x-xenium-ileum-thgbuzuivafhmj4p0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: ileum
- Condition: Crohn disease
- Modality: RNA
- Observations (cells): 91,644
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330953
- Publication: https://doi.org/10.1126/science.aeh7112
- Load: `Catalog().dataset("tHgBuzuIVAFhmj4P0000").to_sdata()`


<a id="mibi-tof-breast-cy0klyhkb2tnsfxf0000"></a>
## Human breast

- uid: `Cy0KLyHkb2TnsFXF0000`
- Page: /datasets/mibi-tof-breast-cy0klyhkb2tnsfxf0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 2,005
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1288
- Collections: [bia-s-biad1288](/collections/md/b.md#bia-s-biad1288)
- Load: `Catalog().dataset("Cy0KLyHkb2TnsFXF0000").to_sdata()`