# SpatialData-DB datasets, shard 15

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-hd-pancreas-rha1qughg2ddb5jz0002"></a>
## Human pancreas

- uid: `RHa1quGhg2dDB5JZ0002`
- Page: /datasets/visium-hd-pancreas-rha1qughg2ddb5jz0002/
- Technology: Visium HD
- Organism: human
- Tissue: pancreas
- Modality: RNA
- Observations (bins): 1,251,573
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/visium-hd-cytassist-11mm-human-pancreas
- Load: `Catalog().dataset("RHa1quGhg2dDB5JZ0002").to_sdata()`


<a id="10x-xenium-breast-9mwoirlpzkk3404f0000"></a>
## Human breast

- uid: `9mWoiRlpzkK3404F0000`
- Page: /datasets/10x-xenium-breast-9mwoirlpzkk3404f0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (cells): 574,852
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/ffpe-human-breast-with-pre-designed-panel-1-standard
- Load: `Catalog().dataset("9mWoiRlpzkK3404F0000").to_sdata()`


<a id="visium-spatial-gene-expression-prostate-gland-t7r1vlvcoadnfv7a0000"></a>
## Human prostate gland

- uid: `T7r1vLVCoAdNfV7a0000`
- Page: /datasets/visium-spatial-gene-expression-prostate-gland-t7r1vlvcoadnfv7a0000/
- Technology: Visium
- Organism: human
- Tissue: prostate gland
- Condition: prostate adenocarcinoma
- Modality: RNA
- Observations (spots): 3,990
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: None (internal)
- Collections: [hest-prostate-st-internal](/collections/md/b.md#hest-prostate-st-internal)
- Load: `Catalog().dataset("T7r1vLVCoAdNfV7a0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-tissue-wjel31swozk9dsks0000"></a>
## Human bone tissue

- uid: `WJel31sWOzK9dskS0000`
- Page: /datasets/visium-spatial-gene-expression-bone-tissue-wjel31swozk9dsks0000/
- Technology: Visium
- Organism: human
- Tissue: bone tissue
- Condition: estrogen-receptor positive breast cancer
- Modality: RNA
- Observations (spots): 4,027
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298286
- Publication: https://doi.org/10.1158/0008-5472.CAN-25-3161
- Collections: [geo-gse298286](/collections/md/0.md#geo-gse298286)
- Load: `Catalog().dataset("WJel31sWOzK9dskS0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-c0prztm4yc4aka7p0000"></a>
## Mouse spinal cord

- uid: `c0pRztM4YC4AKa7P0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-c0prztm4yc4aka7p0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 215
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("c0pRztM4YC4AKa7P0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-nfs3zakfiqlemvu30000"></a>
## Mouse brain

- uid: `NFS3zAkFIQLEmVU30000`
- Page: /datasets/visium-spatial-gene-expression-brain-nfs3zakfiqlemvu30000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 4,166
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.nature.com/articles/s41467-023-36071-5
- Publication: https://doi.org/10.1038/s41467-023-36071-5
- Collections: [doi-10-1038-s41467-023-36071-5](/collections/md/9.md#doi-10-1038-s41467-023-36071-5)
- Load: `Catalog().dataset("NFS3zAkFIQLEmVU30000").to_sdata()`


<a id="visium-spatial-gene-expression-mucosa-lybajhjdfoskxx040000"></a>
## Human mucosa

- uid: `LyBajhJDfOSKXX040000`
- Page: /datasets/visium-spatial-gene-expression-mucosa-lybajhjdfoskxx040000/
- Technology: Visium
- Organism: human
- Tissue: mucosa
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE268014
- Publication: https://doi.org/10.1038/s41588-026-02723-7
- Collections: [geo-gse268014](/collections/md/a.md#geo-gse268014)
- Load: `Catalog().dataset("LyBajhJDfOSKXX040000").to_sdata()`


<a id="visium-hd-kidney-bv10bjqz5kli5nmu0000"></a>
## Human kidney

- uid: `bv10bJQZ5klI5nMu0000`
- Page: /datasets/visium-hd-kidney-bv10bjqz5kli5nmu0000/
- Technology: Visium HD
- Organism: human
- Tissue: kidney
- Condition: type 2 diabetes mellitus
- Modality: RNA
- Observations (bins): 154,937
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9467249
- Publication: https://doi.org/10.1038/s41392-026-02653-0
- Collections: [geo-gse317226](/collections/md/0.md#geo-gse317226)
- Load: `Catalog().dataset("bv10bJQZ5klI5nMu0000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-z6zryllgmpobcggo0000"></a>
## Human entorhinal cortex

- uid: `Z6zrYLlGMPobCGGO0000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-z6zryllgmpobcggo0000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("Z6zrYLlGMPobCGGO0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-meqigslhviotv8f80000"></a>
## Mouse lung

- uid: `mEQIgslhVIOTV8F80000`
- Page: /datasets/visium-spatial-gene-expression-lung-meqigslhviotv8f80000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: lung adenocarcinoma
- Modality: RNA
- Observations (spots): 3,788
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE202159
- Publication: https://doi.org/10.1038/s41590-023-01504-2
- Collections: [geo-gse215361](/collections/md/1.md#geo-gse215361)
- Load: `Catalog().dataset("mEQIgslhVIOTV8F80000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-vzwlickufwtl8mil0000"></a>
## Mouse brain

- uid: `VZwLiCKuFwtl8MIL0000`
- Page: /datasets/visium-spatial-gene-expression-brain-vzwlickufwtl8mil0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Condition: Huntington disease
- Modality: RNA
- Observations (spots): 2,184
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285858
- Publication: https://doi.org/10.1016/j.neuron.2025.05.014
- Collections: [geo-gse285858](/collections/md/d.md#geo-gse285858)
- Load: `Catalog().dataset("VZwLiCKuFwtl8MIL0000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-tddcldnp0zfftjry0000"></a>
## Mouse brain

- uid: `tddClDNp0zfFtjry0000`
- Page: /datasets/visium-spatial-gene-expression-brain-tddcldnp0zfftjry0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 2,064
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("tddClDNp0zfFtjry0000").to_sdata()`


<a id="visium-spatial-gene-expression-entorhinal-cortex-ffnyevyxlcvspedu0000"></a>
## Human entorhinal cortex

- uid: `FfNYEvYxlcvSpEDU0000`
- Page: /datasets/visium-spatial-gene-expression-entorhinal-cortex-ffnyevyxlcvspedu0000/
- Technology: Visium
- Organism: human
- Tissue: entorhinal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307990
- Publication: https://doi.org/10.1101/2025.11.20.689483
- Collections: [geo-gse307990](/collections/md/6.md#geo-gse307990)
- Load: `Catalog().dataset("FfNYEvYxlcvSpEDU0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-mbpw4hjmeynpsmqj0000"></a>
## Human lung

- uid: `MbPw4hjmEynpSmqJ0000`
- Page: /datasets/visium-spatial-gene-expression-lung-mbpw4hjmeynpsmqj0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Modality: RNA
- Observations (spots): 4,086
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE271370
- Collections: [geo-gse271370](/collections/md/5.md#geo-gse271370)
- Load: `Catalog().dataset("MbPw4hjmEynpSmqJ0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-juxqj59a8bppp2ll0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `JUXqJ59A8BPpp2LL0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-juxqj59a8bppp2ll0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("JUXqJ59A8BPpp2LL0000").to_sdata()`


<a id="visium-spatial-gene-expression-olfactory-bulb-ckfnmfnqj9ofpyvf0000"></a>
## Mouse olfactory bulb

- uid: `ckfnmfNqj9OFpyVF0000`
- Page: /datasets/visium-spatial-gene-expression-olfactory-bulb-ckfnmfnqj9ofpyvf0000/
- Technology: Visium
- Organism: mouse
- Tissue: olfactory bulb
- Modality: RNA
- Observations (spots): 675
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("ckfnmfNqj9OFpyVF0000").to_sdata()`


<a id="10x-xenium-kidney-tpueopbx6bl9xswv0000"></a>
## Human kidney

- uid: `TPUEOPBx6Bl9XSwV0000`
- Page: /datasets/10x-xenium-kidney-tpueopbx6bl9xswv0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Condition: lipoid nephrosis
- Modality: RNA
- Observations (cells): 61,598
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE286186
- Collections: [geo-gse286184](/collections/md/4.md#geo-gse286184)
- Load: `Catalog().dataset("TPUEOPBx6Bl9XSwV0000").to_sdata()`


<a id="10x-xenium-tongue-uub8pvn0zrhlikzi0000"></a>
## Mouse tongue

- uid: `UUb8pVN0ZRhlIkzi0000`
- Page: /datasets/10x-xenium-tongue-uub8pvn0zrhlikzi0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: tongue
- Condition: head and neck squamous cell carcinoma
- Modality: RNA
- Observations (cells): 37,590
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302128
- Publication: https://doi.org/10.1038/s41416-025-03189-w
- Load: `Catalog().dataset("UUb8pVN0ZRhlIkzi0000").to_sdata()`


<a id="10x-xenium-kidney-oh98ogejk6p33h620000"></a>
## Human kidney

- uid: `oH98OgEjk6P33h620000`
- Page: /datasets/10x-xenium-kidney-oh98ogejk6p33h620000/
- Technology: 10x Xenium
- Organism: human
- Tissue: kidney
- Condition: anti-neutrophil cytoplasmic antibody-associated vasculitis
- Modality: RNA
- Observations (cells): 44,621
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306852
- Publication: https://doi.org/10.1016/j.celrep.2026.117483
- Load: `Catalog().dataset("oH98OgEjk6P33h620000").to_sdata()`


<a id="10x-xenium-brain-ugkx1ngs7mnh0bb40000"></a>
## Mouse brain

- uid: `uGKX1Ngs7MNH0BB40000`
- Page: /datasets/10x-xenium-brain-ugkx1ngs7mnh0bb40000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 84,887
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342913
- Load: `Catalog().dataset("uGKX1Ngs7MNH0BB40000").to_sdata()`


<a id="visium-spatial-gene-expression-brain-6p0ypzd9h2cyqazi0000"></a>
## Mouse brain

- uid: `6p0yPZD9h2cYqAzI0000`
- Page: /datasets/visium-spatial-gene-expression-brain-6p0ypzd9h2cyqazi0000/
- Technology: Visium
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (spots): 3,681
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5773457
- Collections: [geo-gse193107](/collections/md/8.md#geo-gse193107)
- Load: `Catalog().dataset("6p0yPZD9h2cYqAzI0000").to_sdata()`


<a id="visium-spatial-gene-expression-kidney-u4br1qk37ar6wshq0000"></a>
## Mouse kidney

- uid: `u4BR1Qk37AR6WsHq0000`
- Page: /datasets/visium-spatial-gene-expression-kidney-u4br1qk37ar6wshq0000/
- Technology: Visium
- Organism: mouse
- Tissue: kidney
- Condition: malaria
- Modality: RNA
- Observations (spots): 3,328
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE283283
- Collections: [geo-gse283283](/collections/md/4.md#geo-gse283283)
- Load: `Catalog().dataset("u4BR1Qk37AR6WsHq0000").to_sdata()`


<a id="merfish-brain-jkh0erjexbqmrddv0000"></a>
## Mouse brain

- uid: `jkH0eRjExBqMrDdV0000`
- Page: /datasets/merfish-brain-jkh0erjexbqmrddv0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 20,702
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-2.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-2](/collections/md/1.md#abc-zhuang-abca-2)
- Load: `Catalog().dataset("jkH0eRjExBqMrDdV0000").to_sdata()`


<a id="mibi-tof-breast-7tdws49qidzbsjxm0000"></a>
## Human breast

- uid: `7TdWS49qiDzBsjXm0000`
- Page: /datasets/mibi-tof-breast-7tdws49qidzbsjxm0000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,772
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("7TdWS49qiDzBsjXm0000").to_sdata()`


<a id="mibi-tof-breast-q7bvjrib1nltfu530000"></a>
## Human breast

- uid: `q7bVjrib1NLtfu530000`
- Page: /datasets/mibi-tof-breast-q7bvjrib1nltfu530000/
- Technology: MIBI-TOF
- Organism: human
- Tissue: breast
- Condition: triple-negative breast carcinoma
- Modality: protein
- Observations: 1,096
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD1507
- Collections: [bia-s-biad1507](/collections/md/b.md#bia-s-biad1507)
- Load: `Catalog().dataset("q7bVjrib1NLtfu530000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-nhigp5yeky7osvq70000"></a>
## Human lymph node

- uid: `nHIgp5yEKY7OSVQ70000`
- Page: /datasets/phenocycler-fusion-lymph-node-nhigp5yeky7osvq70000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 15,622
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("nHIgp5yEKY7OSVQ70000").to_sdata()`


<a id="phenocycler-fusion-lymph-node-3p19adypivriognn0000"></a>
## Human lymph node

- uid: `3p19adypiVriOGNn0000`
- Page: /datasets/phenocycler-fusion-lymph-node-3p19adypivriognn0000/
- Technology: PhenoCycler-Fusion
- Organism: human
- Tissue: lymph node
- Condition: marginal zone lymphoma
- Modality: protein
- Observations (cells): 11,625
- Licence: CC0 1.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2100
- Publication: https://doi.org/10.1101/2025.04.29.651202
- Collections: [bia-s-biad2100](/collections/md/a.md#bia-s-biad2100)
- Load: `Catalog().dataset("3p19adypiVriOGNn0000").to_sdata()`


<a id="10x-xenium-lung-mpylyxk2x8rlf7ul0000"></a>
## Human lung

- uid: `MpyLyXK2X8rlf7uL0000`
- Page: /datasets/10x-xenium-lung-mpylyxk2x8rlf7ul0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: non-small cell lung carcinoma
- Modality: RNA
- Observations (cells): 16,969
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311609
- Publication: https://doi.org/10.1038/s41592-026-03089-8
- Load: `Catalog().dataset("MpyLyXK2X8rlf7uL0000").to_sdata()`


<a id="vizgen-merscope-breast-7v5rq9g6tceuufal0000"></a>
## Mouse breast

- uid: `7V5RQ9g6tcEuUfaL0000`
- Page: /datasets/vizgen-merscope-breast-7v5rq9g6tceuufal0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: breast
- Condition: breast cancer
- Modality: RNA
- Observations (cells): 663,145
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE291210
- Publication: https://doi.org/10.1038/s41467-026-70242-4
- Load: `Catalog().dataset("7V5RQ9g6tcEuUfaL0000").to_sdata()`


<a id="vizgen-merscope-cranial-nerve-ii-mg8c6sefkzhc4tep0000"></a>
## Mouse cranial nerve II

- uid: `MG8C6SEfKZhC4teP0000`
- Page: /datasets/vizgen-merscope-cranial-nerve-ii-mg8c6sefkzhc4tep0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: cranial nerve II
- Modality: RNA
- Observations (cells): 4,676
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE275954
- Publication: https://doi.org/10.1038/s41593-025-01955-w
- Load: `Catalog().dataset("MG8C6SEfKZhC4teP0000").to_sdata()`


<a id="vizgen-merscope-brain-mng3wophpzx5gfkr0000"></a>
## Mouse brain

- uid: `MnG3wOpHPzX5GFkR0000`
- Page: /datasets/vizgen-merscope-brain-mng3wophpzx5gfkr0000/
- Technology: Vizgen MERSCOPE
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 265,455
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE266688
- Publication: https://doi.org/10.1016/j.celrep.2024.115194
- Load: `Catalog().dataset("MnG3wOpHPzX5GFkR0000").to_sdata()`