# SpatialData-DB datasets, shard 0e

Generated from catalog release catalog-2026-11-01. Each dataset has an anchor named after its slug, and every page on the site links its own section. The guide for agents is /llms.txt.

<a id="visium-spatial-gene-expression-pancreas-l2p8xq6udeirtam50000"></a>
## Human pancreas

- uid: `L2p8xQ6uDeIrtam50000`
- Page: /datasets/visium-spatial-gene-expression-pancreas-l2p8xq6udeirtam50000/
- Technology: Visium
- Organism: human
- Tissue: pancreas
- Condition: pancreatic ductal adenocarcinoma
- Modality: RNA
- Observations (spots): 2,691
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282302
- Publication: https://doi.org/10.1016/j.celrep.2025.116827
- Collections: [geo-gse282302](/collections/md/d.md#geo-gse282302)
- Load: `Catalog().dataset("L2p8xQ6uDeIrtam50000").to_sdata()`


<a id="spatial-transcriptomics-breast-pusurqj3a6vds4zc0000"></a>
## Human breast

- uid: `PUsuRQj3a6vdS4Zc0000`
- Page: /datasets/spatial-transcriptomics-breast-pusurqj3a6vds4zc0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: breast
- Condition: invasive ductal breast carcinoma
- Modality: RNA
- Observations (spots): 306
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://pubmed.ncbi.nlm.nih.gov/34650042/
- Publication: https://doi.org/10.1038/s41467-021-26271-2
- Collections: [doi-10-1038-s41467-021-26271-2](/collections/md/6.md#doi-10-1038-s41467-021-26271-2)
- Load: `Catalog().dataset("PUsuRQj3a6vdS4Zc0000").to_sdata()`


<a id="spatial-transcriptomics-heart-hqherxpc7o6j8spr0000"></a>
## Human heart

- uid: `HQHerxPc7O6J8sPr0000`
- Page: /datasets/spatial-transcriptomics-heart-hqherxpc7o6j8spr0000/
- Technology: spatial transcriptomics
- Organism: human
- Tissue: heart
- Modality: RNA
- Observations (spots): 226
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.sciencedirect.com/science/article/pii/S0092867419312826?via%3Dihub
- Publication: https://doi.org/10.1016/j.cell.2019.11.025
- Collections: [doi-10-1016-j-cell-2019-11-025](/collections/md/b.md#doi-10-1016-j-cell-2019-11-025)
- Load: `Catalog().dataset("HQHerxPc7O6J8sPr0000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-ygrrwqf38yougfx60000"></a>
## Mouse spinal cord

- uid: `yGRrwqf38yOuGfx60000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-ygrrwqf38yougfx60000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 59
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("yGRrwqf38yOuGfx60000").to_sdata()`


<a id="spatial-transcriptomics-spinal-cord-qsazoby9qksjb2gs0000"></a>
## Mouse spinal cord

- uid: `qSAZOBy9qKsjb2GS0000`
- Page: /datasets/spatial-transcriptomics-spinal-cord-qsazoby9qksjb2gs0000/
- Technology: spatial transcriptomics
- Organism: mouse
- Tissue: spinal cord
- Condition: amyotrophic lateral sclerosis
- Modality: RNA
- Observations (spots): 280
- Licence: CC BY-NC-SA 4.0 (non-commercial)
- Source: https://www.science.org/doi/10.1126/science.aav9776?url_ver=Z39.88-2003&rfr_id=ori:rid:crossref.org&rfr_dat=cr_pub%20%200pubmed
- Publication: https://doi.org/10.1126/science.aav9776
- Collections: [doi-10-1126-science-aav9776](/collections/md/1.md#doi-10-1126-science-aav9776)
- Load: `Catalog().dataset("qSAZOBy9qKsjb2GS0000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-przuxxv8zznqshdx0000"></a>
## Mouse intestine

- uid: `prZuXXv8Zznqshdx0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-przuxxv8zznqshdx0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 3,354
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE245274
- Publication: https://doi.org/10.1038/s41586-024-08216-z
- Collections: [geo-gse245274](/collections/md/1.md#geo-gse245274)
- Load: `Catalog().dataset("prZuXXv8Zznqshdx0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-cryd5jxghmy2idib0000"></a>
## Mouse lung

- uid: `CRYD5jxghMY2IDIB0000`
- Page: /datasets/visium-spatial-gene-expression-lung-cryd5jxghmy2idib0000/
- Technology: Visium
- Organism: mouse
- Tissue: lung
- Condition: pulmonary fibrosis
- Modality: RNA
- Observations (spots): 2,013
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE250395
- Publication: https://doi.org/10.1038/s41586-025-08727-3
- Collections: [geo-gse250395](/collections/md/f.md#geo-gse250395)
- Load: `Catalog().dataset("CRYD5jxghMY2IDIB0000").to_sdata()`


<a id="visium-spatial-gene-expression-tendon-d0dfmted53l4o4qb0000"></a>
## Mouse tendon

- uid: `d0dFmTEd53l4o4qB0000`
- Page: /datasets/visium-spatial-gene-expression-tendon-d0dfmted53l4o4qb0000/
- Technology: Visium
- Organism: mouse
- Tissue: tendon
- Modality: RNA
- Observations (spots): 650
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE216214
- Publication: https://doi.org/10.1016/j.celrep.2022.111706
- Collections: [geo-gse216214](/collections/md/c.md#geo-gse216214)
- Load: `Catalog().dataset("d0dFmTEd53l4o4qB0000").to_sdata()`


<a id="visium-spatial-gene-expression-bone-element-w5hvxfqttuki5akf0000"></a>
## Human bone element

- uid: `w5hvXFqTtuKi5aKf0000`
- Page: /datasets/visium-spatial-gene-expression-bone-element-w5hvxfqttuki5akf0000/
- Technology: Visium
- Organism: human
- Tissue: bone element
- Condition: osteosarcoma
- Modality: RNA
- Observations (spots): 662
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE293065
- Publication: https://doi.org/10.1038/s41467-026-74603-x
- Collections: [geo-gse293065](/collections/md/7.md#geo-gse293065)
- Load: `Catalog().dataset("w5hvXFqTtuKi5aKf0000").to_sdata()`


<a id="visium-spatial-gene-expression-lung-kzkq7djchtji3www0000"></a>
## Human lung

- uid: `kzKq7dJCHTJi3WWw0000`
- Page: /datasets/visium-spatial-gene-expression-lung-kzkq7djchtji3www0000/
- Technology: Visium
- Organism: human
- Tissue: lung
- Condition: obsolete idiopathic pulmonary fibrosis
- Modality: RNA
- Observations (spots): 2,130
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285246
- Publication: https://doi.org/10.1183/13993003.00022-2025
- Collections: [geo-gse285246](/collections/md/b.md#geo-gse285246)
- Load: `Catalog().dataset("kzKq7dJCHTJi3WWw0000").to_sdata()`


<a id="visium-spatial-gene-expression-retina-gdx1luyjts3oqfve0000"></a>
## Macaque retina

- uid: `GdX1LuYjtS3oQfve0000`
- Page: /datasets/visium-spatial-gene-expression-retina-gdx1luyjts3oqfve0000/
- Technology: Visium
- Organism: macaque
- Tissue: retina
- Modality: RNA
- Observations (spots): 4,818
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE304504
- Publication: https://doi.org/10.1016/j.omta.2026.201726
- Collections: [geo-gse304504](/collections/md/0.md#geo-gse304504)
- Load: `Catalog().dataset("GdX1LuYjtS3oQfve0000").to_sdata()`


<a id="visium-spatial-gene-expression-amygdala-zs2rm84zhpui7owv0000"></a>
## Human amygdala

- uid: `Zs2rM84Zhpui7Owv0000`
- Page: /datasets/visium-spatial-gene-expression-amygdala-zs2rm84zhpui7owv0000/
- Technology: Visium
- Organism: human
- Tissue: amygdala
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE342709
- Collections: [geo-gse342709](/collections/md/a.md#geo-gse342709)
- Load: `Catalog().dataset("Zs2rM84Zhpui7Owv0000").to_sdata()`


<a id="visium-spatial-gene-expression-ovary-p7drgfbrur3o04560000"></a>
## Human ovary

- uid: `p7DrGFbRUR3O04560000`
- Page: /datasets/visium-spatial-gene-expression-ovary-p7drgfbrur3o04560000/
- Technology: Visium
- Organism: human
- Tissue: ovary
- Condition: ovarian serous adenocarcinoma
- Modality: RNA
- Observations (spots): 878
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327312
- Collections: [geo-gse327312](/collections/md/b.md#geo-gse327312)
- Load: `Catalog().dataset("p7DrGFbRUR3O04560000").to_sdata()`


<a id="visium-spatial-gene-expression-intestine-uaxtejjwdys4i32n0000"></a>
## Mouse intestine

- uid: `UaXtejjwDys4i32N0000`
- Page: /datasets/visium-spatial-gene-expression-intestine-uaxtejjwdys4i32n0000/
- Technology: Visium
- Organism: mouse
- Tissue: intestine
- Modality: RNA
- Observations (spots): 2,098
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320442
- Collections: [geo-gse320442](/collections/md/7.md#geo-gse320442)
- Load: `Catalog().dataset("UaXtejjwDys4i32N0000").to_sdata()`


<a id="visium-spatial-gene-expression-intervertebral-disk-ppyttrclrc8e6h2c0000"></a>
## Mouse intervertebral disk

- uid: `PPyTtrCLrc8E6H2C0000`
- Page: /datasets/visium-spatial-gene-expression-intervertebral-disk-ppyttrclrc8e6h2c0000/
- Technology: Visium
- Organism: mouse
- Tissue: intervertebral disk
- Modality: RNA
- Observations (spots): 1,916
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9812268
- Load: `Catalog().dataset("PPyTtrCLrc8E6H2C0000").to_sdata()`


<a id="10x-xenium-lung-f0oenbhfsnomjejn0000"></a>
## Human lung

- uid: `F0oeNbhFSNOMJejN0000`
- Page: /datasets/10x-xenium-lung-f0oenbhfsnomjejn0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: lung
- Condition: small cell lung carcinoma
- Modality: RNA
- Observations (cells): 117,072
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE343063
- Load: `Catalog().dataset("F0oeNbhFSNOMJejN0000").to_sdata()`


<a id="10x-xenium-skin-of-body-lcaxod0ctweyb92y0001"></a>
## Human skin of body

- uid: `LCAXoD0ctWEYb92Y0001`
- Page: /datasets/10x-xenium-skin-of-body-lcaxod0ctweyb92y0001/
- Technology: 10x Xenium
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 90,106
- Licence: CC BY 4.0
- Source: https://www.10xgenomics.com/datasets/human-skin-data-xenium-human-multi-tissue-and-cancer-panel-1-standard
- Collections: [10x-human-skin-data-xenium-human-multi-tissue-and-cancer-panel-1-standard](/collections/md/c.md#10x-human-skin-data-xenium-human-multi-tissue-and-cancer-panel-1-standard)
- Load: `Catalog().dataset("LCAXoD0ctWEYb92Y0001").to_sdata()`


<a id="visium-spatial-gene-expression-liver-opysad9iq9ex1xdp0000"></a>
## Mouse liver

- uid: `opYSad9IQ9eX1xdp0000`
- Page: /datasets/visium-spatial-gene-expression-liver-opysad9iq9ex1xdp0000/
- Technology: Visium
- Organism: mouse
- Tissue: liver
- Condition: fatty liver disease
- Modality: RNA
- Observations (spots): 532
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM5764425
- Collections: [geo-gse192741](/collections/md/4.md#geo-gse192741)
- Load: `Catalog().dataset("opYSad9IQ9eX1xdp0000").to_sdata()`


<a id="visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-hrumpwfhp7fdj6yi0000"></a>
## Human dorsolateral prefrontal cortex

- uid: `hRUMpWfhp7fdJ6yI0000`
- Page: /datasets/visium-spatial-gene-expression-dorsolateral-prefrontal-cortex-hrumpwfhp7fdj6yi0000/
- Technology: Visium
- Organism: human
- Tissue: dorsolateral prefrontal cortex
- Condition: major depressive disorder
- Modality: RNA
- Observations (spots): 4,992
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333974
- Collections: [geo-gse333974](/collections/md/c.md#geo-gse333974)
- Load: `Catalog().dataset("hRUMpWfhp7fdJ6yI0000").to_sdata()`


<a id="10x-xenium-skin-of-body-ldx3xoduf5zbqtqa0000"></a>
## Mouse skin of body

- uid: `lDX3xODUF5ZBQtqa0000`
- Page: /datasets/10x-xenium-skin-of-body-ldx3xoduf5zbqtqa0000/
- Technology: 10x Xenium
- Organism: mouse
- Tissue: skin of body
- Condition: melanoma
- Modality: RNA
- Observations (cells): 134,966
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319706
- Load: `Catalog().dataset("lDX3xODUF5ZBQtqa0000").to_sdata()`


<a id="visium-spatial-gene-expression-perianal-skin-co6ckp83mt77eofb0000"></a>
## Human perianal skin

- uid: `Co6ckp83MT77EoFB0000`
- Page: /datasets/visium-spatial-gene-expression-perianal-skin-co6ckp83mt77eofb0000/
- Technology: Visium
- Organism: human
- Tissue: perianal skin
- Condition: anal fistula
- Modality: RNA
- Observations (spots): 12,803
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM8521495
- Collections: [geo-gse277387](/collections/md/8.md#geo-gse277387)
- Load: `Catalog().dataset("Co6ckp83MT77EoFB0000").to_sdata()`


<a id="merfish-brain-tayzbn4sgneloiuh0000"></a>
## Mouse brain

- uid: `TayZBn4sgnELOIUh0000`
- Page: /datasets/merfish-brain-tayzbn4sgneloiuh0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 117,074
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-3.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-3](/collections/md/6.md#abc-zhuang-abca-3)
- Load: `Catalog().dataset("TayZBn4sgnELOIUh0000").to_sdata()`


<a id="merfish-brain-z8oqrnw5ei7z4byc0000"></a>
## Mouse brain

- uid: `z8OQRnw5eI7z4BYc0000`
- Page: /datasets/merfish-brain-z8oqrnw5ei7z4byc0000/
- Technology: MERFISH
- Organism: mouse
- Tissue: brain
- Modality: RNA
- Observations (cells): 7,644
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://alleninstitute.github.io/abc_atlas_access/descriptions/Zhuang-ABCA-1.html
- Publication: https://doi.org/10.1038/s41586-023-06808-9
- Collections: [abc-zhuang-abca-1](/collections/md/5.md#abc-zhuang-abca-1)
- Load: `Catalog().dataset("z8OQRnw5eI7z4BYc0000").to_sdata()`


<a id="10x-xenium-macula-lutea-to9zyzkibogrhbhp0000"></a>
## Human macula lutea

- uid: `TO9zYzKiBOGrhbHp0000`
- Page: /datasets/10x-xenium-macula-lutea-to9zyzkibogrhbhp0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: macula lutea
- Condition: wet macular degeneration
- Modality: RNA
- Observations (cells): 32,609
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE318037
- Load: `Catalog().dataset("TO9zYzKiBOGrhbHp0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-2bucgpi7mlti8g7o0000"></a>
## Human skin of body

- uid: `2bUcGpI7MlTi8g7O0000`
- Page: /datasets/vizgen-merscope-skin-of-body-2bucgpi7mlti8g7o0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 9,487
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("2bUcGpI7MlTi8g7O0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-amsctdoadsrqjg0b0000"></a>
## Human skin of body

- uid: `aMsCTDOadSRqjg0B0000`
- Page: /datasets/vizgen-merscope-skin-of-body-amsctdoadsrqjg0b0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 16,172
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("aMsCTDOadSRqjg0B0000").to_sdata()`


<a id="maldi-mass-spectrometry-imaging-kidney-epkblgakdjdqypjo0000"></a>
## Human kidney

- uid: `epkBLgAKdjDQyPJO0000`
- Page: /datasets/maldi-mass-spectrometry-imaging-kidney-epkblgakdjdqypjo0000/
- Technology: MALDI mass spectrometry imaging
- Organism: human
- Tissue: kidney
- Modality: Metabolomics
- Observations: 6,660
- Licence: CC BY 4.0
- Source: https://metaspace2020.org/dataset/2021-12-21_23h29m10s
- Load: `Catalog().dataset("epkBLgAKdjDQyPJO0000").to_sdata()`


<a id="vizgen-merscope-middle-temporal-gyrus-jdhdq93cnqsmuzqk0000"></a>
## Human middle temporal gyrus

- uid: `JdHDQ93cnQSmUZqk0000`
- Page: /datasets/vizgen-merscope-middle-temporal-gyrus-jdhdq93cnqsmuzqk0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: middle temporal gyrus
- Modality: RNA
- Observations (cells): 20,898
- Licence: Allen Institute Terms of Use (non-commercial)
- Source: https://portal.brain-map.org/explore/seattle-alzheimers-disease
- Publication: https://doi.org/10.1038/s41593-024-01774-5
- Collections: [seaad-mtg-merfish](/collections/md/6.md#seaad-mtg-merfish)
- Load: `Catalog().dataset("JdHDQ93cnQSmUZqk0000").to_sdata()`


<a id="vizgen-merscope-skin-of-body-kldrfi5qdbwhtaiz0000"></a>
## Human skin of body

- uid: `KlDRFi5qdbwHtAIZ0000`
- Page: /datasets/vizgen-merscope-skin-of-body-kldrfi5qdbwhtaiz0000/
- Technology: Vizgen MERSCOPE
- Organism: human
- Tissue: skin of body
- Modality: RNA
- Observations (cells): 24,333
- Licence: CC BY 4.0
- Source: https://www.ebi.ac.uk/biostudies/BioImages/studies/S-BIAD2376
- Publication: https://doi.org/10.1038/s41588-026-02552-8
- Collections: [bia-s-biad2376](/collections/md/f.md#bia-s-biad2376)
- Load: `Catalog().dataset("KlDRFi5qdbwHtAIZ0000").to_sdata()`


<a id="10x-xenium-brain-dw8qzukjwyb0uf0g0000"></a>
## Human brain

- uid: `DW8qzUkJWYb0UF0g0000`
- Page: /datasets/10x-xenium-brain-dw8qzukjwyb0uf0g0000/
- Technology: 10x Xenium
- Organism: human
- Tissue: brain
- Condition: ependymoma
- Modality: RNA
- Observations (cells): 122,683
- Licence: NCBI GEO policy
- Source: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE260452
- Publication: https://doi.org/10.1038/s41586-026-10214-2
- Load: `Catalog().dataset("DW8qzUkJWYb0UF0g0000").to_sdata()`